Mus caroli (Ryukyu mouse): 110297628
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Entry
110297628 CDS
T05910
Symbol
Vps35l
Name
(RefSeq) VPS35 endosomal protein sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110297628 (Vps35l)
Membrane trafficking [BR:
mcal04131
]
Protein recycling
Others
Retriever complex
110297628 (Vps35l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4698
Motif
Other DBs
NCBI-GeneID:
110297628
NCBI-ProteinID:
XP_021022156
Ensembl:
MGP_CAROLIEiJ_G0030370
UniProt:
A0A6P5Q5X2
LinkDB
All DBs
Position
7:120920639..121020963
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AA seq
991 aa
AA seq
DB search
MAAGAGPSFPGCEKRGWTRKTDDHVTGKMAVFPWHSRNRNYKAELASCRLETVPLECGDY
HPLKPITVTESKTKKVSRKGSTSSTSSSSSSSVIDPLSSVLDGTDPLSMFAATSDPAATV
TVTDSSRKKRDKDENSFVGPDFEPWANKRVEILARYTTTEKLSINLFMGSEKGRAGAAAS
AMSEKVRTRLEELDDFEEGSQKELLNLTQQDYVNRIEELNQSLKDAWATDQKVKALKIVI
QCSKLLSDTSVIQFYPSKFVLITDILDTFGKLVYERIYSMCVDSRSALPDHFSPENVNDT
AKETCLNWFFKIASIRELIPRFYVEASILKCNKFLSKTGISECLPRLTCMIRGIGDPLVS
VYARAYLCRVGIEVAPHLKESLNKNFFDFLLTFKQIHGDTVQNQLVAQGVELLSYLPLYS
PAMGWIFQCVSYHAPEALLTEMMERCKKLGNNALLLNSVMSAFRAEFVATRSMDFIGMIK
ECDESGFPKHLLFRSLGLNLALADPPENDRLQILNEAWKVITKLKNPQDYINCAEVWVEY
TCRHFTKREVNTVLADVIKHMTPDRAFEDSYPQLQSIIQKVIAHFHDFSVLFSVEKFLPF
LDMFQKESVRVEVCKCIMEAFIKHQQEPTKDPVILNALLHICKTMHDSVNALTLEDEKRM
LAHLINGFIKMVSFGRDFEQQLSFYVESRSMFCNLEPVLVQLIHSVNRLAMETRKVMKGN
HSRKTAAFVRACVAYCFITIPSLVGIFTRLNLYLHSGQVALANQCLSQADAFFKAAISLV
PEVPKTISIDGKLRPSEPFLLEFLCNFFSTLLIVPDHPEHGVLFLVRELLNVIQDYTWED
TSDDKIRIYTSVLHLLSAMSQDTYLYHIDKVDSNDSLYGGDSKFLAENSKLCEAVMAQIL
EHLKTLAKDEALKRQSLLGLSFFNSILAHGDLRNNKLNQLSVNLWHLAQRHGCADTRTMV
KTLDYIKKRSKQPDMNHLSELALRLPLQTRT
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggggcggggccgagcttccctggttgtgagaaaaggggctggacgcggaaa
acagacgatcatgtgactgggaagatggctgtctttccctggcactcccggaacaggaac
tacaaggcggagctggcatcttgcagattggagacagtgcctttggagtgtggagactac
cacccgctgaagcccatcactgtcacggagtcaaagacaaagaaagtgagccggaaagga
agcacgtcatctacctcctcctcctcttccagctccgtgatcgatcctctgagcagcgtc
cttgatggcaccgacccgctctccatgtttgcagccacctcggacccagcagccacagta
acagtcacagacagctccagaaagaaacgtgataaggatgagaactccttcgtgggacct
gatttcgagccctgggccaacaaacgtgtcgaaatccttgcccggtacacaactacagag
aagctgtctattaatctgtttatgggatcagaaaaaggcagagctggggctgcggcttct
gccatgtcagagaaggttcggacgcggctggaagagctggatgactttgaggagggatcc
cagaaggagctgctgaacctgacccaacaggattatgtgaaccgcatagaggagctcaac
cagtctctgaaggatgcctgggccacggaccagaaagtgaaggctctgaagattgtcatc
cagtgttcaaagctgctgtcggacacgagcgttattcagttctacccaagcaaatttgtc
cttatcaccgacatccttgatacgtttggaaagctggtctatgagcgcatctactcgatg
tgtgtggacagccgcagtgccttgccagatcatttctctccagagaacgtgaacgacacg
gccaaggagacatgcctgaattggtttttcaagatcgcttccatccgggaactcattcca
agattttatgtggaagcatccatcctgaagtgtaacaagttcctctccaaaacggggatt
tcagagtgcctgccccgactaacctgcatgatcagagggatcggagacccactcgtgtcc
gtgtacgcccgggcctacctgtgtcgggtggggatcgaagtggccccgcacctcaaggag
agcctcaataagaacttctttgacttcctgcttacatttaaacagattcatggggacact
gtccagaaccagctggtggcccagggagtggagctgctgtcctatctccctctgtactcg
cctgccatgggctggatcttccagtgtgtctcctaccacgctccagaggctttgctgacg
gagatgatggaaagatgtaagaaactagggaacaatgctttgctgttgaactccgtgatg
tcagctttcagggctgagttcgttgccaccaggtctatggacttcatcggcatgatcaaa
gagtgtgacgagtccggcttccccaagcatctcctttttcgatcattggggttaaacttg
gctttggctgatcctcctgagaacgatcgacttcagattctcaatgaagcttggaaagtc
atcactaaactgaagaatcctcaggactacattaattgtgccgaggtttgggtagagtac
acctgcaggcatttcacgaaacgagaagttaacactgttctggctgacgtcatcaagcac
atgactccggatcgagcatttgaggactcttacccccagctccagtcaataattcagaaa
gtcatcgcccacttccacgatttctcagttcttttctcagtggaaaagtttctaccattt
ctggacatgttccagaaagagagtgtgcgggtagaggtttgcaagtgcatcatggaagcc
tttatcaagcaccagcaggagccaaccaaggaccctgtcatcctcaatgcccttttgcac
atttgcaagactatgcacgactctgtgaacgctctcacgctggaggatgagaaaaggatg
ctggcccatttgatcaatggatttataaaaatggtgtcctttggccgtgattttgaacag
cagctcagcttttacgtcgagtccaggtctatgttttgcaacctggaacctgttcttgtg
cagttgatccatagtgtgaaccggttggcaatggaaacaaggaaagtcatgaagggaaac
cactccagaaagacagctgcgtttgtccgggcctgtgttgcctactgcttcatcaccatc
ccgtccctggtagggatcttcacccgcctcaacctctacctgcattccggtcaggttgcc
ttggccaaccagtgcctctcccaagctgatgctttcttcaaagccgccatcagcctcgtt
cccgaagtcccaaagacgataagcatcgatgggaagctgcggccgtcggagcccttcctc
ctggaattcctgtgcaatttcttctctaccttattgatcgtgccggatcatccagagcat
ggagtcctatttctggttcgagaacttctcaacgtaatccaggactacacctgggaggac
actagtgatgacaaaattcgaatctacacttctgtcctgcacctgctgtctgccatgagc
caggacacctatctttaccacatagacaaagttgactccaatgacagcctgtacggggga
gactccaagttcctggctgagaacagcaagctgtgtgaggctgtgatggctcagatcctg
gagcacctgaaaaccctggccaaagacgaggctctgaagcgacagagcctgctgggcctc
tccttcttcaatagcatcctagcccacggggatcttcgtaacaacaagctgaaccaactc
tctgtcaacctatggcacctggcacagagacacggctgtgcagacacaaggactatggtg
aaaactctggactacatcaagaagcgaagcaaacaacctgacatgaatcatctgtcagag
ctggccctaaggctccctctgcaaaccaggacctga
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