Mus caroli (Ryukyu mouse): 110297721
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Entry
110297721 CDS
T05910
Symbol
Polr2i
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
KO
K03017
DNA-directed RNA polymerase II subunit RPB9
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03020
RNA polymerase
mcal03420
Nucleotide excision repair
mcal05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110297721 (Polr2i)
09124 Replication and repair
03420 Nucleotide excision repair
110297721 (Polr2i)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
110297721 (Polr2i)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcal03021
]
110297721 (Polr2i)
03400 DNA repair and recombination proteins [BR:
mcal03400
]
110297721 (Polr2i)
Transcription machinery [BR:
mcal03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
110297721 (Polr2i)
DNA repair and recombination proteins [BR:
mcal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
110297721 (Polr2i)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_RPB9
Zn_ribbon_TFIIS
Zn_ribbon_recom
Ogr_Delta
Zn_ribbon_GRF_2
HVO_0758
TtuA_LIM_N
Zn_ribbon_NrdR
Motif
Other DBs
NCBI-GeneID:
110297721
NCBI-ProteinID:
XP_021022327
Ensembl:
MGP_CAROLIEiJ_G0029507
UniProt:
A0A6P5PUH6
LinkDB
All DBs
Position
7:29479306..29480618
Genome browser
AA seq
125 aa
AA seq
DB search
MEPDGTYEPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITH
EVDELTQIIADVSQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCG
HRWTE
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgacgggacgtacgagcctggcttcgtgggtattcggttctgccaggaatgt
aataacatgctgtaccccaaggaggacaaggaaaatcgcattctgctgtacgcgtgccgg
aattgcgattaccagcaggaagccgacaacagctgcatctacgtcaacaaaatcacgcac
gaagtggacgagctgacccagatcatcgcagacgtgtcccaggaccctacgttgccccgg
acggaggaccacccgtgccagaagtgtggccacaaggaggcagtgttcttccagtcacac
agtgcccgagctgaggacgccatgcgcctgtactatgtgtgcacagccccacactgcggc
caccgctggactgagtga
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