Mus caroli (Ryukyu mouse): 110297802
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Entry
110297802 CDS
T05910
Symbol
Smg9
Name
(RefSeq) protein SMG9 isoform X1
KO
K18735
protein SMG9
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110297802 (Smg9)
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
110297802 (Smg9)
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Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
AAA_30
DUF6079
Motif
Other DBs
NCBI-GeneID:
110297802
NCBI-ProteinID:
XP_021022457
Ensembl:
MGP_CAROLIEiJ_G0029333
UniProt:
A0A6P5PZX1
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Position
7:23672354..23695643
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AA seq
520 aa
AA seq
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MSESGHSQPGLYGIERRRRWKEPGSSGPQNLSGPGGRERDYIAPWERERRDGSEDPSTNV
MQKTPIILSKPPAERSKQPPPSTAPAAPPAPAPLEKPIVLMKPREEGKGPVAGTGASTPE
GTVPPPPTAPAPPKGEKEGQRPTQPVYQIQNRGMGTAAPTAMDPVVGQAKLLPPERMKHS
IKLVDDQMNWCDSAIEYLLDQTDVLVVGVLGLQGTGKSMVMSLLSANTPEEDQRAYVFRA
QSAEMKERGGNQTSGIDFFITQERIVFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYV
EMQSLQIAAFLFTVCHVVIVVQDWFTDLSLYRFLQTAEMVKPSTPSPSHESSSSAGSDEG
TEYYPHLVFLQNKARREDFCPRKLRQMHLMIDQLMAHSHLRYKGTLSMLQCNVFPGLPPD
FLDAEVNLFLVPFMDSEAENENPPRAGPGSSPLFSLLPGYRGHPSFQSLVSKLRSQVMSM
ARPQLSHTILTEKNWFHYAARIWDGVKKSSALAEYSRLLA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagtctgggcacagtcagcctgggctctacgggatagagcggcggcggcggtgg
aaggagccaggctccagtggcccccagaatctttctgggcctggtggtcgggagagagac
tacattgccccctgggaaagagagagacgggatggcagcgaagaccccagcactaatgtc
atgcagaaaacccccatcatcctctcaaagcccccagctgagcggtcaaagcagccgcca
cctagtacagcgccagctgcaccgccagccccggccccactggagaaacccattgtgctc
atgaagccacgtgaggaggggaaggggcctgtggctggaacaggggcttccacccctgaa
ggtactgtgcccccgccccccacggcccctgcaccacccaagggagagaaggaggggcag
agacccacacagcctgtgtaccagattcaaaaccggggcatgggcactgctgccccaact
gccatggaccctgtggtgggccaggctaagctcctgcccccagagcgcatgaagcacagc
atcaagctggtagacgaccagatgaactggtgtgacagcgccattgagtacctgctggat
cagacggacgtgttagtggtcggtgtcttaggcctccaggggacaggcaagtccatggtc
atgtcactgctgtctgcaaacactccagaggaagaccagagagcatatgtcttccgggct
cagagtgcggagatgaaggaacgagggggcaatcagaccagcggcattgacttcttcatt
acccaagagcggattgtcttcctagacacgcagcccatcctcagcccatccatcttggac
cacctcatcaataacgaccgcaaactgcctccagagtataacctccctcacacctatgtg
gaaatgcagtccctgcagatagctgccttcctcttcacggtctgccacgtggtgatcgtc
gtgcaggattggttcacggacctcagtctgtacaggttcctgcagacagctgagatggtg
aagccgtccacaccgtcccccagccacgagtccagcagctctgcaggctcagacgagggc
accgagtactacccccacctggtcttcctgcagaataaggcacgtagggaggacttctgt
ccccggaagctacgtcagatgcacctgatgattgaccagctcatggcacactcccacctg
cgctacaaggggacgctgtccatgctacagtgcaacgtcttcccagggctgccgcccgac
ttccttgatgctgaggtcaacttgttcctggtgcccttcatggacagtgaagctgagaac
gagaacccacctcgagcaggacctggctccagccccctcttttccctcctgcctgggtac
cgaggtcaccccagcttccagtccttggtcagcaagctccgcagccaggtgatgtctatg
gctcggccacagctgtcacacacgatcctcactgagaagaattggttccactacgctgcc
cgaatctgggatggggtgaagaagtcctcagccctggcagagtacagccgcctgctggcc
tga
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