KEGG   Mus caroli (Ryukyu mouse): 110297829
Entry
110297829         CDS       T05910                                 
Symbol
Stx1b
Name
(RefSeq) syntaxin-1B
  KO
K08486  syntaxin 1B/2/3
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal04130  SNARE interactions in vesicular transport
mcal04721  Synaptic vesicle cycle
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    110297829 (Stx1b)
 09150 Organismal Systems
  09156 Nervous system
   04721 Synaptic vesicle cycle
    110297829 (Stx1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mcal04131]
    110297829 (Stx1b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mcal04147]
    110297829 (Stx1b)
Membrane trafficking [BR:mcal04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    110297829 (Stx1b)
Exosome [BR:mcal04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   110297829 (Stx1b)
  Exosomal proteins of other body fluids (saliva and urine)
   110297829 (Stx1b)
SSDB
Motif
Pfam: Syntaxin SNARE Syntaxin_2 AAA_13 Lzipper-MIP1 Dcst2 Spectrin_Anc-1 Relaxase_C GNVR FAD_binding_1 ARM_ECM29 Polysacc_deac_2 VBS_C3G9 CAP_N
Other DBs
NCBI-GeneID: 110297829
NCBI-ProteinID: XP_021022511
Ensembl: MGP_CAROLIEiJ_G0030522
UniProt: A0A6P5Q011
LinkDB
Position
7:complement(129848000..129863954)
AA seq 288 aa
MKDRTQELRSAKDSDDEEEVVHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAI
LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
TLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
KMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
DYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASSIGGTLGL
NT seq 867 nt   +upstreamnt  +downstreamnt
atgaaggatcggactcaggagctgcggagtgcgaaagacagtgatgatgaagaggaggtg
gtccacgtggatcgagaccactttatggatgagttctttgagcaggtggaagagatccga
ggctgcatcgagaagctgtctgaggatgtggagcaagtgaagaaacagcatagcgccatt
cttgccgcccccaaccccgatgagaagactaaacaggagctggaggacctcacagcagac
atcaaaaagacggcaaacaaggtccggtccaagttgaaagcgatcgagcaaagcattgag
caggaagaggggctgaatcgttcctctgcggacctgcgcatccgcaagacccagcactcc
acactctcacggaagttcgtggaggtaatgaccgaatataatgcaactcagtccaagtac
cgggaccgctgcaaggaccgcatccagaggcagctggagatcactggcaggactactacc
aatgaagaactggaagacatgttggaaagcgggaagctggccatcttcacggatgatatc
aaaatggactcacagatgacgaagcaagctctgaatgagatcgagacaaggcacaacgag
atcatcaaactggaaaccagcatccgagagctgcacgacatgtttgtggacatggccatg
ctcgtagagagccagggtgagatgatcgaccgaattgagtacaacgtggaacattccgtg
gactacgtggaacgagccgtgtccgacaccaagaaagctgtgaagtatcagagcaaggcc
aggaggaagaaaattatgatcatcatttgctgtgtggtgctgggggtggtcttggcgtca
tccattggggggacactgggcttgtag

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