Mus caroli (Ryukyu mouse): 110297864
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Entry
110297864 CDS
T05910
Symbol
Clpb
Name
(RefSeq) caseinolytic peptidase B protein homolog isoform X1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04213
Longevity regulating pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
110297864 (Clpb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
mcal03110
]
110297864 (Clpb)
Chaperones and folding catalysts [BR:
mcal03110
]
Heat shock proteins
HSP100
110297864 (Clpb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Ank
Ank_2
Ank_5
Ank_3
ClpB_D2-small
Ank_4
AAA_5
AAA
Zeta_toxin
Sigma54_activat
AAA_22
AAA_24
Torsin
nSTAND3
AAA_3
AAA_14
ATPase_2
YchF-GTPase_C
ABC_tran
RP853
Motif
Other DBs
NCBI-GeneID:
110297864
NCBI-ProteinID:
XP_021022574
Ensembl:
MGP_CAROLIEiJ_G0030064
UniProt:
A0A6P5Q1W6
LinkDB
All DBs
Position
7:104359624..104486915
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AA seq
707 aa
AA seq
DB search
MMLSAVLRRTTPAPRLFLRLTKSPSLQSRGSAYGRGVVTGDRGEPQRLRAAAWVRPGASS
IFFPGRGAATWGRCGERTEIPYLTAASSERGPSPEETLPGQDSWNGVPNKTGLGMWALAM
ALVVQCYSKNPSNKDAALMEAARANNVQEVRRLLSEGADVNARHKLGWTALMVASISHNE
SVVQVLLAAGADPNLGDEFSSVYKTANEQGVHSLEDGRQDCASWRMTNQWTSALEFRRWL
GVPVGVLVTREDDFNNRLNHRASFKGCTALHYAVLADDYSIVKELLDGGANPLQRNEMGH
TPLDYAREGEVMKLLKTSETKYMEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAA
IRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEV
AKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGK
GKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSRNRIAENLGDVQMSDKITISKNF
KENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLL
WDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVEDSDKHL
LKSPELPSPQAEKRPPTLRLEIIDKDSKTRKLDIQAPLHPEKVCYTI
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgtccgcggtgttgaggagaaccacgccagcgccccggctcttcctaaggtta
accaaatctccatctctccaaagccggggaagtgcttacggccgtggcgttgtcaccgga
gaccgcggggagccgcagcggctgagagctgccgcttgggtgcgccctggagcatcttct
atcttcttccccggacggggggcagccacctgggggcgctgtggagaacgcacggagatc
ccatacctgactgccgcctcgtcggaacgcggtcctagccccgaagaaacactcccggga
caagacagctggaatggggtccccaacaagacgggtctgggcatgtgggccttggccatg
gcgctggtggttcagtgctacagcaagaatccatctaacaaggatgcagctctaatggaa
gctgctcgggccaacaacgtgcaggaagtcagaaggctgttatcagaaggtgcagatgtc
aatgcaaggcacaaacttggctggacagcactgatggtggcatccatcagccacaatgag
agtgtggtgcaggtcctgcttgctgctggagctgacccaaaccttggggatgagttcagc
agtgtctacaagactgccaatgaacagggagtccattctttggaagatgggagacaagac
tgtgcaagctggcgaatgacaaaccagtggacaagtgccctggagttcaggaggtggcta
ggagtcccagttggcgtcctagtcactcgagaggatgacttcaacaaccggctaaaccac
cgtgctagcttcaaaggctgcacagccctgcactatgctgtcctggccgacgactacagc
atcgtcaaggagctgctggacggaggagccaacccccttcagaggaacgagatggggcac
acgcccctggattacgcccgggaaggggaggttatgaagcttctgaaaacttctgagacc
aagtacatggagaagcagaggaagcgggaggcagaggagcggcgccgcttcccactggag
cagcgactgaaggagcacatcattggccaggagagtgccatcgccaccgttggtgctgcg
atccggaggaaggagaatggctggtacgatgaggagcaccctctagtcttcctcttcttg
ggatcgtctggaatagggaaaaccgagctggccaagcagacagcaaagtatatgcacaaa
gatgccaaaaagggcttcatccggctcgacatgtctgagttccaggagcgacatgaggta
gccaagtttatcggttctccaccaggctacatcggccatgaagaaggtggccagctgacc
aagaaactgaaacagtgcccaaatgcagtagtcctctttgatgaggtggacaaggcccat
ccagatgtgctcaccatcatgctgcagctgtttgatgagggccgcctgacagatggcaag
gggaagaccattgactgcaaggatgccatcttcatcatgacttccaatgtagccagtgat
gagattgcccagcatgcattgcagctcagacaggaagctttggagatgagccgaaatcga
atcgctgaaaaccttggggatgtccagatgagtgacaagatcaccatctccaagaacttt
aaagagaatgtgatccgacccatcttgaaagctcacttccggagagacgagtttctggga
cggatcaatgagatcgtctacttcctccctttctgccactcagagctcatccagctggtc
aacaaggaactgaacttctgggccaagagagccaagcagaggcacaacatcacactactg
tgggaccgcgaggtggcagacgtgttggttgatggctacaacgtccactatggtgcccgc
tccattaagcatgaggtagagcggcgtgtggtaaaccaactggcagcagcctatgagcag
gacctgctaccagggggttgcaccctgcgtatcactgtggaggactcagacaagcacctc
ctcaagagccctgagctgccctcaccccaggctgagaagcgtccacctacattgcgactg
gagatcattgataaggacagcaagacccgcaaactggacatccaggcaccactccaccct
gagaaggtgtgctacaccatctag
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