KEGG   Mus caroli (Ryukyu mouse): 110297878
Entry
110297878         CDS       T05910                                 
Symbol
Pnkp
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    110297878 (Pnkp)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:mcal01009]
    110297878 (Pnkp)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mcal03400]
    110297878 (Pnkp)
Enzymes [BR:mcal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     110297878 (Pnkp)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     110297878 (Pnkp)
Protein phosphatases and associated proteins [BR:mcal01009]
 HAD phosphatases
  Other HAD phosphatases
   110297878 (Pnkp)
DNA repair and recombination proteins [BR:mcal03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     110297878 (Pnkp)
SSDB
Motif
Pfam: PNK3P FHA_2 AAA_33 HAD Hydrolase_6 Zeta_toxin Viral_helicase1 HAD_PNKP AAA_17
Other DBs
NCBI-GeneID: 110297878
NCBI-ProteinID: XP_021022607
Ensembl: MGP_CAROLIEiJ_G0029679
UniProt: A0A6P5Q6X4
LinkDB
Position
7:46791101..46796751
AA seq 522 aa
MSQLGSRGRLWLQSPTGGPPPIFLPSNGQALVLGRGPLTQVTDRKCSRNQVELIADPETR
TVAVKQLGVNPSTAGVQELKPGLSGSLSLGDVLYLVNGLYPLTLRWEELSTPGSQPDAPP
DTPGDPEEGEDTEPQKKRVRKSSLGWESLKKLLVFTASGVKPQGKVAAFDLDGTLITTRS
GKVFPTSPSDWRILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKTKVEAVLE
KLGVPFQVLVATHAGLNRKPVSGMWDHLQEQANEGIPISIEDSVFVGDAAGRLANWAPGR
KKKDFSCADRLFALNVGLPFATPEEFFLKWPAARFELPAFDPRTISSAGPLYLPESSSLL
SPNPEVVVAVGFPGAGKSTFIQEHLVSAGYVHVNRDTLGSWQRCVSSCQAALRQGKQVVI
DNTNPDVSSRARYIQCAKDAGVPCRCFNFCATIEQARHNNRFREMTDPSHAPVSDMVMFS
YRKQFEPPTLAEGFLEILEIPFRLQEHLDPALQRLYRQFSEG
NT seq 1569 nt   +upstreamnt  +downstreamnt
atgtcacagcttggatctcggggccgcctgtggctgcagagccccaccggtgggccgccc
cctatattcctgccgtcgaatggccaagccctggtcctcggtcggggacccctgacccaa
gtgacggaccggaagtgctcccgaaaccaagtggagctgattgcagaccctgaaacccgg
acagtggcagtgaaacagctgggtgttaacccgtcaactgctggggtccaggagttgaag
ccaggactgtctggctctctaagcttgggggatgtcctttatctggttaatggcctatat
cccctgaccctgcgttgggaagagctcagcacaccaggatcccagccagatgctccacca
gacactcctggggatccggaggaaggagaggatactgagccgcagaaaaagcgagttcgg
aaatcctctcttggctgggagagcttaaagaagttactggtgttcacagcgtctggggtg
aagccccagggcaaggtggctgcctttgacctagatgggaccctcatcaccacccgctct
ggaaaggtcttccccactagccctagtgactggaggattctgtacccagagattccaaag
aagctccaggagctggctgctgagggctacaagttggtaatcttcaccaaccaaatgggc
atcgggcgaggcaagctgccagcagaggtgttcaagaccaaggtggaagctgtattggag
aagttaggggtcccatttcaggtgctggtggcaacgcatgcaggtctaaaccgaaagcca
gtgagtggcatgtgggaccatttgcaggagcaggccaacgagggcatccccatctccata
gaggacagtgtcttcgtgggagatgcagcagggcgcctagccaactgggccccagggagg
aaaaaaaaggatttctcttgtgcagaccgcctgttcgcccttaacgttggcctgcccttt
gccactccggaagagtttttccttaagtggccagctgcccgctttgagcttccagctttc
gacccgaggactatctccagtgctgggcccctctacctcccagagtccagctctctcctg
agccccaacccagaggtggtggtcgcagtaggattccctggggccggcaagtccactttc
atccaggagcacctagtgtcagctggctatgtccatgtgaacagggacacgctgggctcg
tggcagcgctgtgtgagctcatgccaggcggcactgaggcaggggaagcaagtcgtgatt
gacaacaccaacccagatgtctcaagtcgggccaggtacatccaatgtgccaaagatgca
ggtgtgccctgccgctgtttcaacttctgtgctacaatagagcaggcacgccacaacaac
aggttccgtgagatgaccgacccttcgcatgcacctgtgtcggacatggtcatgtttagc
tacaggaagcagtttgagccgcccacactggctgaaggcttcctggagatccttgagatt
ccattccggttacaggagcatctggacccggcactgcagcgactgtaccgccagttttcc
gagggctga

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