Mus caroli (Ryukyu mouse): 110298013
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Entry
110298013 CDS
T05910
Name
(RefSeq) tripartite motif-containing protein 30A-like
KO
K10648
tripartite motif-containing protein 5 [EC:
2.3.2.27
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03250
Viral life cycle - HIV-1
mcal05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110298013
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
110298013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110298013
Enzymes [BR:
mcal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110298013
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110298013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-B_box
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
RING_XB3-XBAT31
U-box
zf-RING_5
zf-Nse
zf-C3HC4_3
zf-UBR
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
110298013
NCBI-ProteinID:
XP_029335436
Ensembl:
MGP_CAROLIEiJ_G0030187
UniProt:
A0A6P7RE77
LinkDB
All DBs
Position
7:complement(106767079..106780310)
Genome browser
AA seq
426 aa
AA seq
DB search
MASQFMMNLKEEVTCPICLNLMVKPVSADCGHTFCQGCITVHFESIKCDKEMFICPVCRL
TYQFSNLRPNLHVANIVERLKEFKPSPEEEQKVFNCARHGEKLQLFCRKDMMAICWLCER
SQEHRGHKTALIEEVAQEYKEQLQVVRQRLMADKKEFENWKDELQKDRTYWEASGDPGVE
NIIKRSHTFSMMKPKTIPREQRRMFRAPDLQGMLQVLQEVTEAQRYWVQVTLVQNNNPNI
AITDDKRQVRYEDHQARNLEHGCENSHEGVLGHPVIQSGKHYWEVDVSGKGAWVLGLSDG
SYLFCPIFHSNAERNPLFCRGIKNDSHYQPKYGFWVIGLWKKSVYNAFEECPFTGKPSVL
TLSLMVPPCRVGVFLDYXAGTLSFYNISNNGTLIYRFCTASFPDRVFPYFNPTGSSEPMT
ICWPDS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacaattcatgatgaatttaaaggaggaggtgacctgtcctatttgtctgaac
ctgatggtgaaacctgtgagtgcagattgtggtcacaccttctgccaaggttgcatcacg
gtgcactttgaatccatcaaatgcgataaggaaatgttcatttgccctgtgtgccgactt
acttaccagtttagcaatctgaggcctaatctacatgtggccaacatagtagagaggctc
aaagagttcaagcccagcccggaagaggagcaaaaagtgtttaactgtgcaagacatgga
gagaaactccagctcttctgtaggaaggacatgatggctatctgctggctttgtgagcga
tctcaggagcaccgtggtcacaaaacagctctcattgaagaggtggcccaggagtacaag
gagcagctgcaggtagttcggcaaaggctgatggcagataagaaagaatttgaaaactgg
aaagatgaacttcagaaggatagaacttactgggaggcaagtggggaccctggtgtggag
aacatcataaaacggagtcatactttttctatgatgaagcccaaaaccatccccagggaa
caaagaagaatgttccgagcccctgacctgcaaggcatgctgcaagtgctgcaagaggtc
acagaggctcaacgctactgggttcaggtgaccctggttcaaaacaacaatccaaacatt
gccattactgacgacaaaagacaagtacgatatgaagaccaccaagcaaggaatcttgaa
catgggtgtgaaaactctcatgaaggcgtcctgggacacccagttatccaatcaggaaaa
cattactgggaagtagatgtgtctggtaaaggtgcttgggttctggggttaagtgatgga
agctacctcttctgtccaatatttcattcaaatgctgaaagaaaccctttattttgtagg
gggattaagaatgattcacattatcaaccaaaatatggcttctgggttatagggctgtgg
aaaaagtctgtgtataatgcttttgaggagtgtcctttcacaggcaagcccagtgtcttg
accctgtctctgatggtcccgccctgtcgtgttggtgttttccttgactatncagctggc
actctctcattttacaatatttccaacaatgggactcttatctacagattctgtacagct
tcctttcctgatagggtttttccatattttaatcccacgggaagttcagagccgatgaca
atatgctggccagactcttaa
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