Mus caroli (Ryukyu mouse): 110298195
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Entry
110298195 CDS
T05910
Symbol
Nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03013
Nucleocytoplasmic transport
mcal05014
Amyotrophic lateral sclerosis
mcal05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110298195 (Nup98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
110298195 (Nup98)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110298195 (Nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110298195 (Nup98)
03036 Chromosome and associated proteins [BR:
mcal03036
]
110298195 (Nup98)
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110298195 (Nup98)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110298195 (Nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
110298195
NCBI-ProteinID:
XP_021022934
Ensembl:
MGP_CAROLIEiJ_G0030082
UniProt:
A0A6P7RGF6
LinkDB
All DBs
Position
7:complement(104824274..104917190)
Genome browser
AA seq
1816 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTKPG
GLFGTSSFSQPATSTSTGFGFGTSTGTSNSLFGTASTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTAGLFGSSPATSSATGL
FSSSTTNSAFSYGQNKTAFGTSTTGFGTNPGGLFGQQNQQTTSLFSKPFGQATTTPNTGF
SFGNTSTLGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQPNTGFGAV
GSTLFGNNKLTTFGTSTTSAPSFGTTSGGLFGNKPTLTLGTNTNTSNFGFGTNNSGSSIF
GSKPAAGTLGTGLGTGFGTALGAGQASLFGNNQPKIGGPLGTGAFGAPGFNTSTAILGFG
APQAPVALTDPNASAAQQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAA
QKALTTPTHYKLTPRPATRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKL
VLKNLNNSNLFSPVNHDSEDLASPSEYPENGERFSFLSKPVDENNQQDGEDDSLVSRFYT
NPIAKPIPQTPESVGNKNNSSSNVEDTIVALNMRAALRNGLEGSSEETSFHDESLQDDRE
EIENNAYHIHPAGIVLTKVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGD
VNLTNLNLDDIVHIRRKEVIVYVDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSP
DRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEEHPPKTT
SKKLKTAPLPAAGQATTFQMTLNGKPAPPPQSQSPEVEQLGRVVELDSDMVDITQEPVPD
SVLEESVPEDQEPLSASTHIASSLGINPHVLQIMKASLLVDEEDVDAMDQRFGHIPSKGE
TVQEICSPRLPISASHSSKSRSIVGGLLQSKFASGTFLSPSASVQECRTPRTSTRMNIPS
TSPWSVPLPLATVFTVPSPAPEVQLKTVGIRRQPGLVPLEKSITYGKGKLLMDMALFMGR
SFRVGWGPNWTLANSGEQLHGSHELENHQVADSMEYGFLPNPVAVKSLSESPFKVHLEKL
GLRQRKLDEDLQLYQTPLELKLKHSTVHVDELCPLIVPNPGVSVIHDYADWVKESPRDFL
ELPIVKHWSLTWTLCEALWGHLKELDGQLDEPSEYIQTLERRRAFSRWLSHTAAPQIEEE
VSLTRRDSPIEAVFSYLTGSRISEACSLAQQSGDHRLALLLSQLVGSQSVRELLTMQLAD
WHQLQADSFIHDERLRIFALLAGKPVWQLSEQKQINVCSQLDWKRTLAIHLWYLLPPTAS
ISRALSMYEEAFQNTPEGDKYACSPLPSYLEGCGCMVEEEKDSRRPLQDVCFHLLKLYSD
RHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSEQCEGVLQASYAGQLESEGL
WEWAIFVFLHIDNSGMREKAVRELLTRHCQLSETPESWAKETFLTQKLCVPAEWIHEAKA
VRAHMESNKHLEALYLFKAGHWNRCHKLVIRHLASDAIINENYDYLKGFLEDLAPPERSS
LIQDWETSGLVYLDYIRVIEMLHRIQQVDCSGYELEHLHTKVTSLCNRIEQIPCYNAKDR
LAQSDMAKWVANLLRVVLSLQHAPDATSNSTPDPQRVPLRLLAPHIGRLPMPEDYALEEL
RGLTQSYLRELTVGSQ
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcatttggaaccccctttgggggtggtacagggggctttggcacaacg
tcaacatttggacaaaatactggctttggtacgactagtggaggagcatttggaacatct
gcgtttggttctagcaacaatactggaggcttatttggaaattctcagaccaaaccagga
ggattatttggtaccagttcatttagccagccagcaacctccacaagcactggttttggg
tttggcacatcaacaggaacatcaaatagcttatttggaactgcaagtaccgggaccagt
cttttctcatcccagaacaatgcatttgcacaaaataaaccaactggctttgggaatttt
ggaaccagtactagcagtggaggactctttggaactacaaataccacctctaatcctttt
ggtagcacatctggctccctttttgggccaagtagttttaccgcagcacctacaggaact
accatcaaatttaatcctcccactggtacagatactatggtcaaagctggagttagcact
aacatcagtacaaagcatcagtgtattactgctatgaaagaatatgaaagcaagtcatta
gaggaactacgtttggaggattatcaggctaaccggaaaggcccacagaaccaagtggga
gcaggtaccacggctggcttatttgggtcttctccagcaacttccagtgcaacaggactc
ttcagctcctccaccactaattcagccttttcatatggtcagaacaaaactgcctttgga
actagcacaactggatttggaacaaatccaggtggtctctttggccaacagaatcaacag
actaccagtctcttcagcaaaccatttggccaggctacaaccaccccgaacactggcttt
tcctttggtaataccagcacccttggacagccaagcaccaatactatgggcctatttggg
gtaacccaagcctcacaaccaggaggtctttttgggacagctacaaacaccagcactggg
acagcatttggaacaggaacaggtctctttgggcagcccaatactggatttggtgcagtt
ggttcgaccctgtttggcaataacaagcttacaacttttggaaccagcacaaccagtgct
ccttcatttggtacaaccagtggcgggctcttcggtaacaaaccaaccctgactttagga
accaatacaaacacttccaattttgggtttggcacaaataacagtgggagcagtattttt
ggaagtaagccagcagctggaactttgggaactggacttggtacaggatttggaacagct
cttggtgctggacaggcatctttgtttggaaacaaccaacctaagattggagggcctctt
ggtacaggagcctttggggcccctggatttaatacttcgacagccattttgggctttggc
gccccccaggccccagtagctttgacagatccaaatgcttctgctgcccagcaggctgtt
ctccagcagcacctcaatagcctaacatactcaccctttggagactcccccctcttccgg
aatcctatgtcagatcctaagaagaaagaagagagactgaaaccaaccaatccagctgct
cagaaggcccttacaacacctactcattataaacttacacctcgccctgctaccagagtc
aggccaaaggctttgcaaacaacaggcacagccaaatcacatctctttgatgggctggat
gacgatgaaccatctctagccaacggagcattcatgcctaaaaagagcatcaagaagttg
gttttgaaaaatctcaacaatagcaatctcttttctcctgttaatcatgattcagaagat
ctagcttcaccctctgaatatccagaaaatggagaaagatttagcttcctgagcaaacct
gttgatgagaacaatcagcaggatggagaagatgactctcttgtatcacgattttacact
aatcctattgccaaacccattccacaaactccagagagtgttggaaacaaaaataacagt
agcagcaatgtggaagataccattgttgccttgaacatgcgtgctgctttgcgcaatgga
ttggaaggaagcagtgaagagacgtctttccatgatgagtcgttgcaagatgaccgagaa
gaaatagaaaataatgcttaccacatacacccagcaggcattgttctcacaaaagttggt
tattatactatcccgtctatggatgaccttgctaaaattaccaacgagaagggagaatgc
attgtttctgacttcaccattggtcgtaaaggatatggctcaatctattttgaaggagat
gtgaatttgacaaatctaaatttggatgatattgtgcatatccgaaggaaagaagttatt
gtctatgtagatgataaccagaagccacctgtgggtgaagggctaaacaggaaggctgaa
gttactttggatggagtttggccaacagataaaacatcccggtgtttaataaagagtcca
gatcgacttgctgatatcaactatgaggggagattagaagcagtctcaagaaagcaaggg
gcccaattcaaggagtatcggcctgaaactggttcttgggtatttaaggtctcccatttt
tccaagtatggccttcaggattctgatgaagaagaggaggaacacccaccgaaaactact
tcaaagaagctgaagactgcccctttgcccgctgcaggccaggcaaccactttccagatg
actcttaatggcaagcctgcacccccacctcagagccagagcccagaagtggagcagtta
ggcagggttgtggagctggacagcgacatggtagatatcacccaggagccagttccggat
tctgtgttagaagagagtgtgcctgaggatcaggagcccctgtctgcttcaacacatatt
gcatcttcactgggaattaatccacatgttttacagatcatgaaagcatcattgcttgtt
gacgaagaagatgtagatgccatggatcaacgctttggtcacatcccttccaaaggagag
actgttcaggaaatctgttctcctagactccccatttcagcctcccactcatcaaaatcc
cgctccatagttggtgggttgctgcaatcaaaatttgcaagtggaacttttctttcacca
agtgcctctgtgcaagaatgtcgcactcccaggacatcaactcgcatgaacatcccatcc
acatccccctggtctgtccctctgcccctggccactgtgttcacagtgcccagcccagcc
cctgaggttcagctaaaaacagtggggatacgaaggcaaccaggcctagtccctcttgaa
aaatccattacctatggcaaggggaagctcttgatggacatggccctgttcatgggacgt
tcatttcgggttggttggggtcccaactggactcttgctaatagtggagaacaactgcat
ggctcccatgaactggaaaatcatcaggttgccgattctatggaatatggattcctgccc
aatccagtagctgttaaatctctatctgaatccccattcaaagttcatttggaaaaactc
ggcttaagacagaggaagctggatgaagatctgcagttataccagacacctctagagctc
aaattaaaacatagcactgtccatgtagatgagctgtgtcctctcattgtccccaatcct
ggggtttcagtcattcatgattatgcagattgggttaaggagtcacccagagatttcctg
gaactaccaattgtgaagcactggagcctgacatggacattatgtgaagccctatggggc
cacctgaaggagcttgacggccagctggatgagcccagcgaatacattcagactctggag
cgaagaagagctttttcccgctggctgtcacataccgctgcacctcagattgaagaggaa
gtctccttaacccgcagagacagtcccatagaggctgtcttcagctacctcacgggcagt
aggattagtgaggcctgtagtctggcacagcagtcaggtgatcatcgccttgcccttctt
ctgtctcagttggtgggaagccagtcagtccgggagctgctcaccatgcagttggccgat
tggcatcagcttcaggctgactccttcatccatgatgagcgattgcgcatatttgccctg
ttggctggaaaaccggtgtggcagctctcagagcagaaacaaatcaatgtttgctcccag
ctagattggaaacgaacccttgctatccatctttggtatttgcttccgccaaccgcctcc
atttccagggctctcagcatgtatgaagaagcatttcagaatactcctgagggtgataag
tatgcctgctcccctcttccttcttacctggagggctgcggctgtatggtagaggaagaa
aaagactcccggagaccacttcaagatgtttgctttcatcttctaaaactctacagtgac
agacattatgatctcaatcagctattagaaccccgaagcataactgcagatcctttggac
taccgcctaagctggcacctttgggaagtgctacgtgctcttaactatacccatctctca
gaacagtgtgaaggtgtgctacaggccagttatgctggccaactggaaagtgaaggactc
tgggagtgggccatctttgtcttcctacacattgacaactcgggcatgcgtgagaaggct
gttcgagagctgctgacaaggcactgccaactgtcagagacccctgagtcttgggctaag
gagacattcctcacacagaagctttgtgtgcctgctgagtggattcatgaggccaaagca
gttcgagcacacatggaatccaataagcacttggaggccctctatttatttaaagctggt
cactggaaccgctgccacaaactagtcattcgtcacctagcttctgatgccattattaat
gagaactatgactacctgaaaggattcttagaagatctggcacctccagagcgcagcagc
ctcatccaggactgggaaacatctgggctcgtttacctggattatattcgagtgattgaa
atgctccaccgtattcagcaggtggattgctcaggttatgaactagagcacttacatacc
aaagtgacttcactgtgcaatcggatagagcagattccgtgttacaatgccaaggatcgc
ctggctcaatcagatatggccaagtgggtagccaacttactgcgggtagtgctgagcctt
cagcatgctcctgatgccacctccaactcaacaccagaccctcagcgagtccctttgcgt
cttttggctccccacattggcaggctccccatgcctgaggactatgccttggaggaactg
cgaggccttacccagtcctaccttcgagaactgactgttgggagccagtga
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integrated database retrieval system
