Mus caroli (Ryukyu mouse): 110298224
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Entry
110298224 CDS
T05910
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 34A
KO
K11999
tripartite motif-containing protein 6/22/34
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110298224
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110298224
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_2
zf-C3HC4_3
zf-RING_5
U-box
DZR_2
zf-Nse
zf-RING_10
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
110298224
NCBI-ProteinID:
XP_029335508
UniProt:
A0A6P7R2X7
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Position
7:106721342..106765042
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AA seq
801 aa
AA seq
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MTSTVLVDIRDEVTCPICLELLTEPLSIDCGHSFCQVCITGHSNNSVFSQGGRSSCPVCR
TSYQPGNLRPNRHLAAIVKRLREVALCPGKQLEVIFCALHGEKLQLFCKEDGKLICWLCE
RSQEHRGHHTFLMEEVAQEYQDMFQESLKKLRREQQEAEKLKALIQEKRESWKSQVEPEK
RRIQTEFKQLRSILDREEQRELKKLEVEEKKGLSIIEKAEGDLIHQXQSLKDLISDLEHR
CRGSTVELLQDVGDVTKRSEFWTLRKPQALPTKLKSLFRAPDLKKMLKVFRELTDVQSYW
AIQQSLRKKSLRDXDRKRHRGNIMASTGPTNIQEKTTCPVCQELLTKAHSVCQACLTTKN
AVINPRGKSSCPVCGIRFSLENLQANKHLANIVERIGEVKLKPDIGKKRDLCVHHGEKLL
LFCKEDKKVICWVCERSQEHRGHHTFLWEEAVRECQVNLQKAPTRLRKEQEKVETLEADI
KEDRLSWKHQVQTERQRIQTGFNQLRKILDKEEQIELKRLXEEQMILDSLLEAEAELAQQ
SQLVEELISDLERRAAXGSDTELLQDMSGILKWSQICTLKKPKAVSKKLSMVFQAPDLSG
MLQKLRELTAVRAYWNNFTFNPENLNLNLILSEDHRQXTSVSIWPFKCCNNGILGSKCFS
SGKHYWEVDVSEKNAWTXGVYTRKQTLRFNVRQRKSQPNDYHRYKPQNGYWVIGLQHGSK
YSIFEESSNCDPTVLNPFVATPLHRVGVFLDCEEGTVSFLNVTNNGSLIYKFSQCCFSQP
AYPYFNPWDCPAPMTLCPLKS
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaacagtcttggtggacatccgagatgaagtaacctgccctatctgcttggag
ctcctgacagaacccctgagcattgattgtggccatagcttctgccaggtctgcatcaca
ggacacagtaataattcagtgttcagccaaggagggaggagcagctgtcctgtgtgccgg
acctcctatcagcctgggaacctccgtcctaatcggcacctggccgccatagtgaagagg
ctcagagaggttgcgttgtgccctggaaaacaactcgaggtcatcttttgtgcgcttcat
ggagagaaactccagctcttttgcaaggaggatgggaagttaatttgctggctttgtgag
cgatctcaggagcaccgtggtcatcacacattcctcatggaggaggtggcccaggagtac
caggacatgttccaggagtctctgaagaaactgaggagggagcagcaggaagccgagaag
ctaaaagctcttatccaggagaagagggaatcctggaagagtcaggtggagcctgagaaa
cgccgcatccagacagagtttaagcagctccgaagcatcctggacagggaggagcagcgg
gaactgaagaaactggaagtggaagagaagaaggggctgagcatcatagaaaaggccgag
ggtgacctgatccaccagagncagtcactgaaagacctcatctcagacctggagcaccgg
tgccgggggtccaccgtagaactgctgcaggatgtgggtgatgttacaaaaaggagtgag
ttctggaccctgaggaagccccaagctctccccaccaagctgaaaagtttgtttcgagca
ccggatctgaagaagatgctgaaagtctttagagagctgacagacgtccaaagctactgg
gccatccagcagtccttaagaaagaagagcctcagagattaggacaggaaaagacacagg
ggcaatataatggcctcaacaggtccaacgaatatacaggagaaaaccacttgccctgtc
tgccaagagcttttgaccaaagcccacagtgtatgccaagcctgtctcaccaccaagaat
gcagtgatcaaccccagagggaaaagcagctgtcctgtgtgtggtattagattctcattg
gaaaatctacaggctaataaacatctggcaaacatagtagagaggatcggggaggttaaa
ttgaagcctgacattgggaaaaagagagatctttgtgtacaccatggagagaagctcctt
ctcttctgtaaggaggacaagaaggtcatttgctgggtttgtgagcgttctcaggagcat
cgtggtcaccacacattcctctgggaggaagcagtcagggaatgtcaggtgaatctccag
aaagctcccacgaggctgaggaaggagcaggagaaggtggagacattggaagctgacatc
aaagaagacagactttcctggaagcaccaggtccagactgagaggcaaaggattcaaaca
ggctttaatcagcttagaaaaatcctggacaaggaggaacagatagagctgaaaagactc
nnagaggagcagatgatactggacagcctgttggaggcagaggctgagctggctcaacag
agccagttagtggaggaacttatctcggatctagagcggcgggctgcgtgagggtcagat
acagagctgctgcaggatatgagcggtattttgaaatggagtcagatctgcacactgaag
aagccaaaagcagtttctaagaaactgagcatggtnttccaagctcctgatctgagtggc
atgctacaaaagttaagagagctaacagctgtccgggcctactggaacaacttcacattt
aatccagaaaacctaaatttgaatcttatactttcagaagaccacagacaantgacatct
gtgtccatttggccctttaagtgttgtaataacggtatcttgggctccaaatgtttctcc
tcaggaaaacattactgggaagtggatgtgtctgaaaaaaatgcctggaccntgggagtt
tacactagaaaacaaactttaaggtttaatgttagacaacgcaaaagtcagccaaatgat
taccacagatacaaaccacagaatggctactgggttatagggttacagcatggatcgaag
tatagtatctttgaggaatcttccaactgtgaccctactgttctgaacccctttgtggcc
acccctctccatcgggttggggttttccttgactgtgaagagggcacagtgtcttttctc
aatgtcaccaacaatgggtcactcatttacaagttctcccaatgctgcttttcccaacct
gcctatccatacttcaatccttgggactgtccagcccccatgaccctgtgtcctttgaaa
tcctga
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