Mus caroli (Ryukyu mouse): 110298292
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Entry
110298292 CDS
T05910
Symbol
Usp40
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 40 isoform X1
KO
K11869
ubiquitin carboxyl-terminal hydrolase 40 [EC:
3.4.19.12
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcal01002
]
110298292 (Usp40)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110298292 (Usp40)
Enzymes [BR:
mcal01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110298292 (Usp40)
Peptidases and inhibitors [BR:
mcal01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110298292 (Usp40)
Ubiquitin system [BR:
mcal04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110298292 (Usp40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
DUF5772
Glyoxal_oxid_N
Motif
Other DBs
NCBI-GeneID:
110298292
NCBI-ProteinID:
XP_021023108
Ensembl:
MGP_CAROLIEiJ_G0014388
UniProt:
A0A6P5Q801
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All DBs
Position
1:complement(80424665..80474689)
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AA seq
951 aa
AA seq
DB search
MEYMYDLFSVIIHKGGCYGGHYHVYIKDVDHLGNWQCQEEISDTDVNVKAPQSEEEANDP
LVVLKTILLQEEANQIPVDQLGQKLLKKTGISWNKKYRKQHGPLRKFLQLHPQIFLLSTD
ESTVSLLRYHLTQAPSDLQSCEHILHTLASESPGLNDDTSCPHWFDINDSKVHPIREEDI
TQQFQGKESAYMLFYRKATLQRPTEARANPRYRVPCHLLKEMDAANILLQMRRAECDSAN
STFELHLHLGPHYRFFNGALHPAVSETESVWHLTFDKRKTLGDLRQSIFQLLECWEGDMV
LSVAKRVPAGLHVYHTLDGDDLTLCEAEVADGEDIFVWNGVEVGGVQIQTGFDCEPLLLN
ILHLELSGEGSKCEQLVESPHVFAANAEVGTVFTALGTAAGAILMNSVESAEEECWTAIP
KEDMKKTFREQGLRNGSLILVQDSDSDNRSLLPKQGRGTNSMNELNWLQVKNFCQSESEE
KQLQIAVTMHTVVFDIRIKAIKELKLMKELAENSCLRPIDRNGKLLCPVPDSSTLEEAEV
KMGSSVGLCLGKAPTSSQLFLFFALGTDIHPGAEMDIIVEETLSVRDCLKIMLEKSGQQG
EMWHLRKMDWCYEAGEPLCEEDATLKELMIRSGDTLLVTEGKLPPPGHLKMPIWWYQPAR
LSGHCESLDHLNCAFSQGSSWRAAPTQGAPGPEPAEVSLLYLGDIEISEEATLMELKSQA
LALPSVSKLAVQSTALLRVWTVESKRPSRLLRTNWRQLKEYRLGRKAELCLELLQKEEDL
GPQDVLLRTQLRIPGERAYSLATDLVWDTTRGWTAGSLRQRVADFYSLPVEKIEIAKYFP
EKFEWLPISSWNQQVAKRKKKKNQDTLQGGPYYLKDGDTIGIKNLLFDDNDDFSTIRDDI
GKENQKRLALEKKKSREVHRAQSSDLFSNAGMPARFRGPEASLSIHVASFR
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggaatatatgtatgacctcttctccgtcattattcacaaaggtggctgctatggaggt
cattaccatgtgtacattaaagatgttgatcatcttggcaactggcaatgtcaagaggag
ataagtgatacagatgtgaatgtgaaagctcctcagagtgaagaagaggctaatgatcca
ttggtggttctaaaaacaatcttattgcaggaggaggccaatcaaattcctgttgatcaa
ctaggtcagaaactcttgaaaaaaacaggaatatcttggaacaagaagtacaggaaacag
catggaccactgcgaaagttcttacagctccatcctcagatatttctgctcagcacagat
gaaagtacagttagtctcctgaggtaccatcttacccaggccccatctgacctacagagc
tgtgaacatattctacatacacttgcttcagaatccccaggcttgaatgatgacaccagc
tgtccacactggtttgatatcaatgattccaaagtccatccaatcagagaggaagatatc
acacagcagttccagggtaaagaaagtgcctacatgctgttttatcggaaagccacgtta
caaaggcccactgaagctcgagccaatccaagatacagagttccatgtcatttgctgaag
gaaatggatgcagccaacattctactgcagatgagaagggcagaatgtgattctgcaaac
agtacttttgagttgcatctccatttgggtcctcactaccgtttcttcaatggggctctt
caccctgcagtctctgagacagagagcgtgtggcacttaacgtttgataaaagaaaaact
ttaggagatcttcgtcagtcaatatttcagctcttggaatgttgggaaggagacatggtt
cttagtgttgcgaagcgtgtgccagcaggacttcatgtgtaccataccctcgatggagat
gacttgacactgtgtgaagctgaggttgctgatggggaagacatctttgtatggaatggg
gtagaggttggtggagtccaaattcagactggttttgattgtgaacctctgctgttaaac
attcttcatctagaactaagtggtgaaggctcaaaatgtgagcagttggtggagtcacca
catgtctttgccgctaatgcagaagtgggcactgtgttcacagccttgggcactgcagca
ggcgccatcctcatgaacagtgtggagtctgcagaggaagagtgctggactgctattccc
aaagaagacatgaagaagacattcagagaacaaggtctcagaaatggaagcttaattttg
gttcaagattcagacagtgataatcgcagtctgttgcccaaacaagggagagggaccaac
agcatgaatgagctcaactggctccaagtgaaaaatttctgccagtcagaatctgaagag
aagcagcttcagatagctgtgaccatgcacacagtggtgtttgatattcgaattaaagcc
ataaaggaattaaaattaatgaaggaactagctgagaacagctgtttgagacccattgat
agaaacgggaagcttctttgtccagtcccagacagtagcactttggaggaagcagaggtg
aagatgggaagctccgtgggcctgtgtctgggaaaagcaccaacttcctctcagctgttc
ctgttttttgctctggggactgacattcaccctggggcagagatggacatcatagtagaa
gaaacactctcagtgagagattgtttaaagataatgctggagaagtcaggtcagcaagga
gagatgtggcacttaagaaaaatggattggtgctatgaagctggtgaacctttatgtgaa
gaggatgcaacactgaaagagcttatgatacgctctggggatactttgcttgtaactgaa
gggaaacttcctcctccgggtcacttgaagatgcccatctggtggtaccagcctgcaagg
ctgtcaggacactgtgagagtctggaccacttaaactgtgccttttctcaaggtagcagc
tggagggctgctcccacccaaggtgctcctggccccgagcctgcagaagtctctctcctc
tacttgggggatatagagatctcagaagaggccacattgatggaactgaagtctcaggcc
ttggccttgccttctgtttcgaagctcgctgtccagtccacagccctgctcagagtctgg
acagtggagagcaagcgccccagcaggctcttgcgcactaactggcggcaactcaaggag
tacagactgggccggaaagcagagctctgcctagagctccttcaaaaagaggaggacttg
gggccccaagatgtactgctgaggacacagctccgcatccctggtgaaagagcctactcc
ctggcaacagacctggtatgggacactaccagaggatggactgctggctccttgaggcag
agagtagctgacttctattctcttcctgtggagaaaattgaaattgccaaatattttcct
gaaaagtttgagtggcttccaatatctagctggaatcagcaagttgccaaaaggaaaaag
aagaaaaaccaagatactttgcaagggggaccatattacttgaaagatggagacactatt
ggcattaagaatctcctatttgatgacaatgatgatttcagcacaatcagagatgacatt
ggaaaggaaaaccagaagcggctagctttggaaaaaaagaaaagccgagaagtccaccgt
gcacagagcagcgatttgttctccaacgcagggatgcccgctaggttccggggaccagaa
gcttctctgtccatccacgttgcaagcttcagatag
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