Mus caroli (Ryukyu mouse): 110298506
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Entry
110298506 CDS
T05910
Name
(RefSeq) integrin alpha-X
KO
K06462
integrin alpha X
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04610
Complement and coagulation cascades
mcal04810
Regulation of actin cytoskeleton
mcal05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
110298506
09150 Organismal Systems
09151 Immune system
04610 Complement and coagulation cascades
110298506
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
110298506
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcal04515
]
110298506
04090 CD molecules [BR:
mcal04090
]
110298506
Cell adhesion molecules [BR:
mcal04515
]
Integrins
Integrin alpha subunits
110298506
CD molecules [BR:
mcal04090
]
Proteins
110298506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Integrin_alpha2
FG-GAP
VWA_2
FG-GAP_3
Integrin_alpha
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
110298506
NCBI-ProteinID:
XP_021023460
Ensembl:
MGP_CAROLIEiJ_G0030538
LinkDB
All DBs
Position
7:130154957..130176986
Genome browser
AA seq
1170 aa
AA seq
DB search
MSCTWIAFLLLLGFVSCLGFNLDAEKPTHFHMDGAEFGHSVLQYDSSWVVVGAPKEIKAT
NQRGGLYKCGYHTGNCEPISLQVPPEAVNMSLGLSLAAATNPSRLLACGPTVHHTCRENT
YLTGLCFLLSSPFQQKQNFPTAQQECPRQDQDIVFLIDGSGSISSTDFGKMLDFVKAVMS
QLQRPSTRFSLMQFSHYFRVHFTFNDFISMSSPLSLLDSVRQLGGYTYTASAIKHVITEL
FTTQSGARQDATKVLIVITDGKKERDKLNYDSVIPMAEAAGIIRYAIGVGKAFYNTHSKQ
ELKAIASMPSHEYVFSVENFDALKDIENQLKEKIFAIEGTETPSSSSFELEMSQEGFSAV
FTPDGPVLGAVGSFSWSGGAFLYPSNMRPTFINMSQENEDMRDAYMGYSTELAFWKGVHS
LILGAPRHQHTGKVVIFTQESRHWRPKSEVRGTQIGSYFGASLCSVDMDRDGSTDLVLIG
APHYYEHTRGGQVSVCPMPGVRSRWHCGATLHGEQGHPWGRFGAALTVLGDVNGDSLADV
AIGAPGEEENRGAVYIFHGASRQDIAPSPSQRISASRISSRLQYFGQSLSGGQDLTRDGL
VDLAVGSKGHVLLLRTRPILRVSPTVYFTPAEISRSVFECQEQVTPEQTVGDATVCLHIH
ESPKTQLGDLQSTVTFDLALDHGRLSPRVIFKETKSRALTRVKTLGLNKHCESVTLLLPA
CVEDSVTPITLRLNFSLVGVPISSLQNLQPMLAVDDQTYFTASLPFEKNCGADHICQDDL
SVIFGFPDLKTLVVGSDLELNVDVTVSNDGEDSYGTTVTLFYPMGLSFRRVAEGQVFLRK
KENQQWQRRGQHSLHLMCDSTPDRSQGLWSTSCSIRHVIFRGGSQMTFLATFDVSPKAEL
GDRLLLRARVRSENNVPGTQKTTFQLELPVKYAVYTMISSHDQFTKYLNFSTSEKEKTSV
VEHRFQVNNLGQRDVPVSINFWVPVELKGEAVWTVTVSHPQNPFTQCYRNRLKPTQFDLL
THMQKSPVLDCAIADCLHLRCDIPSLGILDELDFILKGNLSFGWISQTLQKKVLLLSEAE
ITFNTSVYSQMPGQEAFLRAQTKTVLEMYKVHNPIPLIVGSSVGGLLLLAIITAILYKAG
FFKRQYKEMLEEANGQFVSENGTPTPQVAQ
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgagctgtacctggatagcctttcttctgctgttggggtttgtttcttgtcttggcttc
aacttggacgcagaaaagccgacacattttcacatggacggtgctgagttcggacacagt
gtgctccagtatgatagctcctgggtggtggttggagcgccaaaggaaataaaagccact
aaccaaagaggtggcctctacaaatgtggctatcacacaggcaactgtgagcccatctcc
ctccaggtgcccccagaggctgtgaacatgtccctgggcctgtccctcgctgctgccacc
aacccttcccggctgttggcttgtggtcctactgtgcaccacacatgcagagagaataca
tacttgacagggctctgctttctactgagttcaccattccagcagaaacagaacttccca
actgcacagcaagagtgtccaaggcaagaccaagacatcgtgttcctgattgatggctcg
ggtagcatcagttccacagattttggaaaaatgctggactttgttaaagctgtgatgagc
cagcttcagagacctagcacacggttctccctgatgcagttctctcattacttccgagta
cattttactttcaacgacttcatctccatgtcaagccctttaagtctgttggattctgta
agacagctaggagggtacacatacacagcctcggctatcaagcacgtcataacagaactg
ttcaccacccaaagtggagctcggcaagatgccaccaaggtcctcattgtcatcactgat
gggaaaaaagaaagggacaagttgaattatgatagtgtcatccccatggcagaggctgca
ggcatcattcgttatgcaattggggtaggaaaggccttttacaacacacattccaagcaa
gaattaaaggccattgcatcgatgccttcccatgaatacgtattcagcgtggagaacttt
gatgctttgaaggatattgagaatcagctgaaggagaagatctttgccattgagggtaca
gagacaccaagcagcagttcttttgaattggagatgtcccaggagggcttcagtgctgtg
tttacacctgatggaccagttctgggggctgtgggaagcttcagctggtctggaggtgcc
ttcttgtacccctcaaatatgagacccaccttcatcaacatgtctcaggagaacgaggac
atgagggacgcttacatgggttactccactgaactggccttttggaagggggtccacagc
ctgatcctgggggcccctcgccaccagcacacggggaaggttgtcatctttacccaggaa
tccaggcactggaggcccaagtctgaagtcagagggacacagatcggctcctactttgga
gcatctctctgctctgtggacatggatagagatggcagcactgacctggtcctgatcgga
gccccccattactatgagcacacccgaggggggcaggtgtcagtgtgccccatgcccggt
gtgaggagcaggtggcattgtggggccaccctccatggggagcagggccatccttggggc
cgctttggagcggctctgacagtgctaggggacgtgaatggggacagtctggcggatgtg
gctattggtgcacccggagaggaggagaacagaggtgctgtctacatatttcatggagcc
tcgagacaggacatcgctccctcacccagccagaggatttcagcatcccggatctcctcc
aggcttcaatattttgggcagtcactgagtgggggccaggacctcacccgggatggactg
gtggatctggccgtgggctccaagggacacgtgctgctgctcaggaccagaccgattctt
agagtgtcaccaactgtttacttcacacctgcagagatttccaggtctgtgtttgagtgt
caggagcaggtgacccctgagcagacagtgggtgatgccactgtctgccttcatattcat
gaaagccccaagacccaactaggtgacctccaaagtactgtcacctttgatctggctcta
gaccatggccgtctgagtccccgggtcatcttcaaggagacaaagtcccgggctctgact
cgagttaaaactcttggtctgaacaagcactgtgaaagtgtgacgttgcttctcccggcc
tgtgtggaggactctgtgaccccgatcactcttcgcctcaacttttctcttgttggtgtg
cctatcagttccttacaaaatctccaacccatgctggctgtagatgaccaaacgtacttc
acggcctctcttccctttgagaagaactgtggagctgaccacatctgccaggatgacctt
agtgtcatatttggcttcccagacttgaagaccctggtggtgggaagtgacctggagctg
aatgtagatgtgacggtgtctaatgatggagaagattcttatggaaccacagtcactctg
ttctaccccatgggtctgtcctttagacgagttgcagaaggccaagtattccttcggaag
aaagagaaccagcagtggcagcggcgtgggcagcactccctgcacctcatgtgtgacagc
accccagacaggagtcagggcctctggagtaccagctgtagcatcagacatgtcattttc
cgtggaggctcacagatgacttttttggcaacttttgacgtctcccccaaagctgagctg
ggggaccggctgcttctaagagccagagtgagaagtgagaataatgtacctgggacccaa
aaaaccaccttccagttggagcttccagtaaaatacgcggtgtacaccatgatcagcagc
catgaccagtttaccaagtatcttaacttctcaacctcagaaaaggagaagaccagtgtg
gtcgaacatagattccaggtgaataatctgggacagagagacgtgccagtcagcatcaac
ttttgggtgcccgtagagctgaagggagaagctgtgtggacagtgacggtctcccaccct
cagaacccattcacccaatgctatcggaatagactcaagccaacacaatttgacctcttg
actcacatgcaaaagagtcccgtgctggactgcgccatcgccgactgcctgcacctccgt
tgtgacatcccctccttgggcatcctggatgagcttgacttcattctgaagggcaacctc
agcttcggctggatcagtcagacattgcagaaaaaagtgttgctcctgagtgaggctgaa
atcacattcaacacatctgtgtattcccagatgccgggacaggaggcatttctgagagcc
cagacgaagacagtgctggagatgtataaagttcacaaccccatccctcttatcgtgggc
agctcagtgggaggtctgctgctgctggctatcatcacagctatactttacaaggctggt
ttcttcaaacgtcagtacaaggagatgttggaggaagcaaatggacagtttgtctcagaa
aacgggaccccaactccccaggttgcccagtga
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integrated database retrieval system
