Mus caroli (Ryukyu mouse): 110298652
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Entry
110298652 CDS
T05910
Symbol
Tmc3
Name
(RefSeq) transmembrane channel-like protein 3 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
110298652 (Tmc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcal02000
]
110298652 (Tmc3)
03037 Cilium and associated proteins [BR:
mcal03037
]
110298652 (Tmc3)
Transporters [BR:
mcal02000
]
Other transporters
Pores ion channels [TC:
1
]
110298652 (Tmc3)
Cilium and associated proteins [BR:
mcal03037
]
Other cilia and associated proteins
Stereociliary proteins
110298652 (Tmc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
DUF2681
TMEM43
Motif
Other DBs
NCBI-GeneID:
110298652
NCBI-ProteinID:
XP_021023675
Ensembl:
MGP_CAROLIEiJ_G0029939
UniProt:
A0A6P5Q2U8
LinkDB
All DBs
Position
7:86050231..86089234
Genome browser
AA seq
1101 aa
AA seq
DB search
MKTSKASQRYRSIRRNASQCYLYQDSLLLGNSDDSFNADETGDSSDPEQIFQNIQFQKDL
MANIRCRPWTMGQKLRALRRAKEIVLKFEGRLTRTRGYQAAGAELWRKFARLACNFVVIF
IPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTVMTGAFVVLPELIAGQPFGSTASK
TIPREQITSAQDLDTVWSLGGYLQYSVLFYGYYGRERRIGRAGYRLPLAYFLVGMAVFAY
SFIVLLKKMAKNSRTSLASASNENYTFCWRVFCAWDYLIGNPEAAESKTAAILNSIREAI
LEEQEKKKNKNMAVTVCLRIIANILVLLSLAGSIYLIYFVVDRSQKLEQSKKELTLWEKN
EVSVVVSLVTMLAPSAFDLIAALEMYHPRTTLRFQLARVLVLYLGNLYSLIIALLDKVNS
MNIEEAATKNITSHWADAPTFSATRTVPEEGQWPTPGSGAELRRNTSTWVVEETSFLTSI
TPHTKANKTVPYMQGPQGQCWETYVGQEMLKLSVIDMLFTVASILLIDFFRGLFVRYLSD
YWCWDLESKFPEYGEFKIAENVLHLVYNQGMIWMGAFFSPCLPAFNVLKLIGLMYLRSWA
VLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIVHYKPSLNCGPFSGQEKIYD
IVSETIENDFPTWFHAVVGHISSPVVILPAVLLLFMLIYYLQSIARSLKLSSQQLRMQIQ
NARSEDKKKVAQMVEARIQTHEESSKRLLKDSDLISQLSSVYMATSPNNGHMLNFDSLSS
KSLRMEAITRSLPQSPGQGSRDPCSPLPDGSRSRPEQDTNRHPHRPCSSTSNLHKNRSCS
SVTQTQPLKDVRSEPLSRKDFQPISPPFCGSGVSTLMTHDHSPHAPRYYVVNERDSHKKT
HLAFWPERHFKIDALGDIVELYPRNVQQYMSWVPHQPCSPQLSEEEEEMLRRDLVQWSIP
ASSLTDLPRSSCFYTGDRSENNTRDPKYQRRVYYRSGDNSFEDQLERPTFVHRKSRSRNS
QYPQHALKARVKAKFEPSFTESDSVSAASSSDHQNSNNDQYLHVMSSQGRFPRSASQLGR
RKAKSRQVLPTDLNDLICSNV
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacctcaaaggcatcccagcgctacagaagcattcggagaaatgccagccagtgc
tatctctaccaggactccctgcttcttggtaactccgatgacagctttaatgctgatgaa
acgggagacagcagcgatccggaacaaatcttccagaatatacagtttcagaaagatctc
atggcaaatatccgctgcagaccctggaccatggggcagaagctgcgggcgctgagacga
gccaaggagattgtgctgaagtttgaagggcggctgaccaggactcgaggctaccaagca
gcaggagcagagctctggcggaaattcgcccgtctggcctgtaactttgtggtcatcttc
attccctgggaaatgaggataaagaaaattgagagtcacttcgggtctggcgtggcctcc
tacttcatcttcctgaggtggttatttgggatcaacatagtgctcacagtgatgaccggt
gcctttgttgtccttcctgagctgatcgcaggccagccctttggaagtacagccagcaag
accattccccgggagcagatcacatctgcacaggatctggacactgtctggtccctgggg
ggctaccttcaatactccgtcctgttctacgggtactacggaagagagaggcggatcggg
agagccggctaccgcctgcccttggcatatttcctggtggggatggcagtgtttgcttac
agcttcatcgttctcttaaaaaagatggctaagaactcccgcaccagcctagccagtgct
tccaatgaaaactacaccttctgctggcgggtgttttgtgcctgggattatctcattggg
aacccagaggctgcagaaagcaaaacagctgccatcttgaacagcattagggaggccata
ctggaagagcaagaaaagaaaaaaaacaaaaacatggcggtgactgtctgcctgagaatc
attgccaacatcctggtgctcctctcactggctggaagcatctatctcatctactttgtg
gtggaccggtcccagaagctggagcagtcgaagaaggagctgacactttgggaaaagaat
gaggtaagcgtggtggtctccctcgtcaccatgctagcaccgtctgcctttgacctcatc
gctgccttggagatgtaccatccacggacgacactgcgcttccagttagcaagggtcctg
gtactgtatctaggaaatctctacagcttgatcattgctcttctggacaaagtgaacagc
atgaacattgaggaagctgctactaaaaacatcacaagccactgggcagatgctcccacc
ttctctgccaccaggacagtgcctgaagaagggcagtggcccacacctggatcaggagcg
gagctcaggagaaacactagcacatgggtcgtggaagagacaagctttctgacttctatc
acgccacacacaaaggccaacaagacagtgccctacatgcagggcccacaaggccagtgc
tgggagacatatgttggccaggagatgctgaagctgtctgtcatcgacatgctcttcact
gtggccagcatcctcctcatagacttcttccgaggactttttgttcgctacctaagtgac
tattggtgttgggaccttgaaagcaagtttcctgaatatggagaattcaagattgccgag
aatgtgctgcaccttgtctacaatcaagggatgatttggatgggggccttcttctctccg
tgtctgccagcattcaatgttctcaagctcattgggctgatgtacctgaggagctgggca
gtgctgacctgcaatgtaccccaccagcaagtgtttcgggcttccagatccaacaacttc
tacctggcaatgctcctgttcatgctgttcctctgcatgctgcccaccatttttgccatt
gtccactacaagccgtctctgaactgtggtcccttcagcggacaagagaaaatttatgac
attgtgtccgagacgatagagaatgacttcccgacatggtttcacgctgtagttggacat
atcagcagccccgtggtgatacttccagctgtactgcttctgttcatgctcatctactac
cttcagagcatcgcgagatcactcaagctcagcagccagcaactcaggatgcagatccaa
aatgcgagatctgaagataagaaaaaggttgcccaaatggtagaggctcgaatccagact
catgaggaaagcagcaagaggcttctaaaggacagcgaccttatcagccagctgtcctca
gtgtatatggcaacatccccaaacaatggccatatgcttaacttcgactctctgagtagc
aagagcctcaggatggaggcaatcacaaggtccctgcctcagagtcctggacaagggtcc
agggacccctgctctcctcttccagatggatctaggtcaaggccagagcaggacaccaac
aggcatccacataggccatgttccagcacaagcaacctccacaagaacagatcctgctca
tctgtgacccagacacagcccctcaaagatgtccgctcagagcctctttcccggaaagac
tttcagccaatcagtcctcctttctgtggatctggggtctctaccttgatgacacatgac
cacagtccccatgctcccaggtactatgtcgttaatgaacgtgactctcacaaaaagacc
cacctagctttctggccagaaagacatttcaagatagatgctttaggggacattgtagag
ctgtaccccaggaatgtgcagcagtacatgtcctgggttccccaccagccttgctctcca
cagctgagtgaagaagaggaggagatgctcaggcgagatttggtccagtggtcaatccct
gctagctccctgacagacctgcctcggtcttcttgtttttacactggtgacagatcagaa
aataacaccagagaccctaaataccagcgaagggtgtactacagatctggggataatagt
tttgaagaccagcttgagaggcccacatttgtacacagaaagtcacgatccaggaacagc
caatacccacagcatgccctgaaggccagagtcaaggccaaatttgagccgtccttcaca
gaatctgattctgtgtcagcagcatctagcagtgaccatcaaaacagcaacaatgaccaa
tacctgcatgtcatgtccagccagggcagattcccaaggtctgccagccagctgggcagg
aggaaggccaagtccaggcaggtactgcccacagatctaaatgatctaatttgttcaaat
gtctag
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integrated database retrieval system
