Mus caroli (Ryukyu mouse): 110298797
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Entry
110298797 CDS
T05910
Symbol
Lrfn1
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcal04515
]
110298797 (Lrfn1)
04990 Domain-containing proteins not elsewhere classified [BR:
mcal04990
]
110298797 (Lrfn1)
Cell adhesion molecules [BR:
mcal04515
]
Immunoglobulin superfamily
SALM family
110298797 (Lrfn1)
Domain-containing proteins not elsewhere classified [BR:
mcal04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
110298797 (Lrfn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
ig
Ig_2
fn3
LRR_9
LRR_14
Ig_DSCAM-DSCAML_C
CbiM
C2-set_3
Sp38
Motif
Other DBs
NCBI-GeneID:
110298797
NCBI-ProteinID:
XP_021023924
Ensembl:
MGP_CAROLIEiJ_G0029449
UniProt:
A0A6P7R6L1
LinkDB
All DBs
Position
7:27650054..27665924
Genome browser
AA seq
766 aa
AA seq
DB search
MAPGPFSSGLFSPPPAALPFLLLLWAGASRSQPCPGRCICQNVAPTLTMLCAKTGLLFVP
PAIDRRVVELRLTDNFIAAVRRRDFANMTSLVHLTLSRNTIGQVAAGAFADLRALRALHL
DSNRLAEVRGDQLRGLGNLRHLILGNNQIRKVESAAFDAFLSTVEDLDLSYNNLEALPWE
AVGQMVNLNTLTLDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLPPDGLFLRSQGGGPK
PPTPLTVSFGGNPLHCNCELLWLRRLTREDDLETCATPEHLTDRYFWSIPEEEFLCEPPL
ITRQAGGRALVVEGQAVSLRCRAVGDPEPVVHWVAPDGRLLGNSSRTRVRGDGTLDVTIT
TLRDSGTFTCIASNAAGEATAPVEVCVVPLPLMAPPPAAPPPLTEPGSSDIATPGRPGAN
DSATERRLVAAELTSSSVLIRWPAQRPVPGIRMYQVQYNSSADDSLVYRMIPSTSQTFLV
NDLAAGRAYDLCVLAVYDDGATALPATRVVGCVQFTTAGDPAPCRPLRAHFLGGTMIIAI
GGVIVASVLVFIVLLMIRYKVYGDGDSRRIKGTSRTPPRVSHVCSQTNGAGAQQASAPPA
PDRYEALREVAVPAAIEAKAMEAEATSTELEVVLGRSLGGSATSLCLLPSEETSGEESRA
MTGPRRSRSGALGPPTSAPPTLALVPGGAPARPRPQQRYSFDGDYGALFQSHSYPRRARR
TKRHRSTPHLDGAGGGAAGEDGDLGLGSARARLAFTSTEWMLESTV
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggctccaggccccttctcctccgggctcttctcgccaccacctgctgctcttcccttt
ctgctgttgctctgggcaggagcatctcgcagccagccctgccccggtcgctgcatctgt
cagaacgtggcacctacgctgaccatgctgtgtgcgaagacgggcctgctcttcgtgcca
cccgccatcgacaggcgtgtggtagagctgcggctcactgacaacttcattgcggctgtg
cgtcgtcgagacttcgccaatatgaccagcctggtccacctcaccctgtctcgcaacacc
attggccaggtagcagccggcgcctttgctgacctccgggctctccgggccctgcacctt
gacagcaaccgcctggcagaggtgcgaggggatcagctccggggcttgggtaacctccgc
cacttgatcctcggcaacaatcagatccgtaaggtggagtcggcagcctttgatgccttc
ctatccaccgtggaggacctggatctgtcctacaacaacctggaggcactgccatgggag
gcggtgggtcagatggtgaacttgaacaccctcacgctggaccacaacctcattgatcac
attgcggagggcaccttcgtgcagctgcacaaacttgtgcgcttggacatgacctccaac
cgtctacataaattgccccccgacggactgttcctgaggtcccagggcggtgggcccaag
ccacctaccccattgacggtcagcttcggtggcaacccgctgcactgcaactgtgaactg
ctttggcttcggcgcctgaccagggaggacgacttggagacgtgtgccacgcccgagcat
ctcactgaccgctatttctggtccatcccggaggaggaatttctatgtgagcccccgctc
atcacacggcaagcagggggccgcgctctggtggtagagggccaggctgtcagtctgcgc
tgccgggctgtgggtgaccccgagcccgtggtgcattgggtggcacctgatgggcggctg
ttggggaactccagccggactcgggtccgtggtgacggaacgctggatgtgactatcacc
accctgagggacagcggtaccttcacttgcatagcctccaatgctgcgggggaagccacg
gcacctgtggaggtgtgtgtggtacctctgccactgatggcgcccccacctgctgccccg
ccgcctctcaccgaacctggttcttctgacatcgccacaccaggcagacctggtgccaac
gactcagccactgagcgcaggcttgtggctgctgaactcacgtccagctctgtgctcatc
cgctggccggcccagaggccagtgcctggcatccgtatgtaccaagtgcaatacaacagc
tctgcggatgactccctagtctacaggatgatcccttctaccagccagaccttcctagtg
aatgacctggcggctggccgcgcctatgatttgtgtgtgttggcagtctacgacgacggg
gccaccgctctgccggctaccagagtggtgggctgtgtgcaattcaccaccgcgggagat
cctgcaccatgccgcccgctgagggcccacttcttgggcggcaccatgatcatcgccatc
gggggcgtcatcgtagcctcggtcctcgttttcatcgttctgctcatgattcgctacaag
gtgtacggcgatggggacagccgccgcattaaggggacgtccaggacgccccctcgggtc
agccacgtgtgctctcagaccaacggcgcaggtgcgcagcaggcctccgccccaccagct
ccagaccgctacgaggcgctgcgggaggtggctgtccctgcagccatcgaggcaaaggcc
atggaggccgaggcgacttccactgagctagaggtggtgcttggacgctctctgggtggc
tccgccacctcgctgtgcttgctgccctccgaggaaacttctggggaggaatctagggcc
atgaccggccctcgaaggagccgttcgggggccttggggcctccaacttcagcgccccca
acgctagctctggttcctgggggagccccggcccggccgaggccacaacaacgctattcc
ttcgacggggactacggggcgctgttccagagtcacagttacccgcgccgcgcccggcgg
acaaagcgccaccggtccacgccacacctggacggggccggagggggcgcggccggggag
gacggagacctggggctgggctccgcccgggcacgcctggccttcaccagcaccgaatgg
atgctggagagtaccgtgtga
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