Mus caroli (Ryukyu mouse): 110298830
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Entry
110298830 CDS
T05910
Name
(RefSeq) ATP-binding cassette sub-family A member 3-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110298830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcal02000
]
110298830
Transporters [BR:
mcal02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
110298830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
SMC_N
AAA_23
SRP54
AAA_15
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
110298830
NCBI-ProteinID:
XP_021023975
Ensembl:
MGP_CAROLIEiJ_G0030393
UniProt:
A0A6P5QA00
LinkDB
All DBs
Position
7:122358249..122463339
Genome browser
AA seq
1725 aa
AA seq
DB search
MNGIIYALLSILLSRFLPVVTGDLKCVTSSFLKHQPSILPGKMDSLQMRQFSVLLWKNFL
LKSRNVVGLVVEIILIFLLFVWTLTVRRISKKTSISDVIFNPILLTLPKFLNENFDYELA
YVPSESNAARNITEMVKKDLNFNFKVQGFPSEESFERYIKYENKDAHVLAAIVFDHKFKT
SNERLPLQVKYSLRFGRIYDPENLFQPSKYQKEIEWNTSTLFPSVPSLGPRNFLENDGGN
PGYIREGFLIVQHSVDKAIMMYHSGRAAEAIFANTTIYAERFPHPAFIHDSFLWTFIAMF
PWTILFTFTQMALVIVGTIMLEKEKRLKEYQLMVGLSNAMLWVSYFVTFLLMYFIIICLL
CGILFLKITHERVFQHSDPLFIAFYFMCFAVSSMLLGFLISTLFNKASLATSIAGFLHFL
TFFPYLILYHKYDQISLSGKLALCLITNTALAFGTDLICKLEMKGHGAQWNNFATKVNAD
DDLTLAHIIGMFLFSAFLYGLVAWYLDAVFPGTYGVPKPWNFFLQKSYWFGEPALSREES
QVSDLLSNDFMEPEPVGLVAGIRIQHLYKEFILKTSTVMAVNDLSLNLYEGQITVLLGHN
GAGKTTTLSILTGLYLPTRGKVYISGYDISSDMVQIRKSLGLCPQDDLLFPMLTVSEHLH
FYCVIKGIPSQNQSRETNRMLTSFGLLQQSNTMSKDLSGGMKRKLSIIIALMGDTKVVIL
DEPTSGMDPVSRRATWDILQHYKKDRTILLTTHHMDEADVLGDRIAILVMGILKCCGSSL
FLKKLYGVGYHLVIVKTPDSDDEKIFQLIKNYIPTAKMETNVAAELSFILPKEHTHRFAE
LFTDLEKKQEVLGISGFGVSMTTMDEVFFKVSNLEDLKLNTEIAPSASKVSQSSNEDNQN
MNVPRKFERPGYSRRHLDSSFNTGWSLYIQQFRAMFIKRVMFSWRYWKLLLLQLLALLGL
MYLLIKGISFSAPTEPARVMDLEQYGETIVPFSVSGDPNLTQILTKNLEIMLKAKKQKIH
EVQGDMKNYLLTSKDCIYSCIVAFSLDVSTEEKTLIFWFNNEAYHASPLSLSILDNIIYK
HLSGPDATITVSNNPQPQRVTKDKSDERSISGIQIVFNLLFGMSIFTSGFCLMTVTERVS
KAKHIQFVSGVYTLNFWLSALLWDLIIHFVACVLLLIVFLYTDVDILLEKYHFLDTMFIL
MLFGWSIIPFIYLLSFWYNNSTNAYIKIFVFNHCLGFISIIVDAVVQIIPDIKTSTKNLI
LNSMLLLPIYNFGMSIYKYYNIHEIRKLCSSLGYINTIPSCKSQIIDIPIYSMGQKAIGR
HVTAMAATGLIYFTLIIFLETTSWNLKIFIYRYVLFGIYRIFYKVRMSEELSGYSEEEDV
QNERETILNHPWRSLNSTVLIKELIKIYFKIPPTLAVRNISVSIQKEECFGLLGLNGAGK
TTTFKILTGEEIATSGDVFIEGYSITRNILKVRSKVGYCPQFDALLDYMTSREILTMYAR
VWGIPEKSIRAYVDNLLKILYLKPQADKFIYTLSGGNKRRLSTAIAIMGNSTVVFLDEPS
TGMDPLARRMLWNAVIKTRESGKVIIITSHSMEECEALCTRLAIMVQGKFVCLGSPQHLK
NKFGNIYTMTIKFKTDTDDNTVQDLKDFIAEVFPGSDLKQENQGILNYYIPSKNNSWGKV
FGILEKAKEDYNLEDYSISQITLEQVFLTFANPDNPRSGYEKAVP
NT seq
5178 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaataatatacgctttgctgagcatactgctttcaaggttcctgcctgttgta
acaggtgaccttaagtgtgttacatcttcatttcttaagcatcaaccttccatccttcct
ggtaaaatggattcactacagatgaggcagttttcagtcctcctgtggaaaaacttcctt
ctaaagagccggaatgtggttggcttagtggtggagatcatcttgatatttctgttgttt
gtatggactttgactgtacgcagaatttcaaagaagacatctataagcgacgtgattttc
aatcctattctcttgacattacctaaattccttaatgaaaactttgactatgaattggct
tatgtgccttctgagagtaatgcagccagaaatattactgagatggtgaaaaaggattta
aatttcaactttaaagttcaaggttttccttcggaagaatcttttgagagatacattaag
tatgagaacaaggatgcgcatgtgctggctgctattgtgtttgatcacaagttcaaaacc
agcaatgaacgcttgccacttcaggtaaaatatagtttgcgcttcggtcgtatctatgat
cctgaaaatttgtttcagccatctaagtatcagaaagaaatagagtggaatacatcaact
ctcttcccatccgtgccttctctaggaccccggaacttcttggaaaacgatgggggaaac
cctggatacatcagagaaggatttcttatcgtgcagcattcggtagacaaggccatcatg
atgtatcacagtggcagagcagctgaagccatatttgccaacaccacaatttatgcggag
agattcccacacccggcctttattcacgacagcttcttgtggactttcattgctatgttt
ccttggacaattttatttacatttactcaaatggcacttgtcatagttgggaccattatg
ctggaaaaggaaaagagattaaaggaataccagctcatggtgggactcagtaatgctatg
ctctgggtttcctacttcgtcaccttcttattgatgtatttcatcatcatctgtttgctg
tgtgggattttattcctcaagattacacatgagagagtcttccagcatagtgacccgctc
ttcatcgccttctatttcatgtgttttgccgtctcctcaatgctgctcggcttcctgatt
agcacactctttaataaagcctctctggccacttccattgcagggttcctccacttcctc
accttcttcccatatttgatactatatcataagtatgaccagataagcctcagtgggaag
ctggctctctgcctcattaccaacacggcgctagcatttgggactgacttgatatgtaag
ctggagatgaaggggcatggcgctcagtggaacaacttcgctacaaaagtaaacgccgat
gatgacttaaccttggcccacataataggaatgtttttatttagtgcttttctgtatggc
cttgtggcctggtacttagacgctgtctttccagggacgtatggtgtacccaagccctgg
aactttttcctgcagaaatcctactggtttggagagccagccttaagcagggaagagagc
caagtctctgatttactttccaatgattttatggagcctgaacctgttggcttagtggct
ggcatccgtattcagcatttgtacaaggaattcatcttaaaaaccagtactgtgatggca
gtaaatgacttgtctttgaacttgtatgaggggcagataactgttcttctcggacataac
ggggcaggaaagaccaccaccctgtccatcctcacaggtttgtatcttcctaccagagga
aaggtctatattagtggatatgacatctcatctgacatggttcaaattagaaaaagcttg
ggcttgtgtccccaggatgacctgctgttcccgatgctgacagtgtcagaacaccttcat
ttctactgcgtgatcaaaggaataccttcgcagaaccaatcaagagaaactaacaggatg
ctcacttcttttggcctgctgcagcaaagtaataccatgtcaaaggatctgagcggagga
atgaagcgcaagctgtcaatcattatagctctgatgggggacactaaggtggtgatactt
gatgagccaacatctggcatggacccagtctccaggagggccacctgggacatacttcag
cattataaaaaggaccgtaccatcttactgaccacacaccatatggatgaggccgatgtg
cttggtgaccggattgccatcctggtcatggggatcctgaagtgctgtggctcttcgctt
ttcctgaagaaactatatggtgtggggtatcacctagtcatcgtgaagactcctgacagc
gatgatgaaaaaatcttccagctgattaagaattacataccaactgccaagatggagacc
aatgtggcagctgagctgtcatttatcctgcccaaggagcacacgcacaggtttgcagag
cttttcacagacctagaaaaaaaacaagaagtgctgggaatctctggctttggtgtctcc
atgactaccatggatgaggttttcttcaaggtcagtaatctggaagatttgaaattgaac
actgagattgctccatcagcttccaaagtgagccaaagctcaaatgaagacaaccagaac
atgaatgtgcccagaaaatttgagcgaccaggttactcaagaagacacttggattcttca
ttcaataccgggtggtctctttacatccagcagttcagagccatgttcatcaaaagggta
atgttctcttggcgctactggaaactgctgctgctgcagttgctggcacttctgggcctc
atgtatcttctgataaaaggaataagtttctcagctcctacagagcctgccagggtgatg
gacttggaacagtatggcgagaccattgtccctttctcagtttctggggatcccaatttg
acccagattctcaccaaaaatcttgagatcatgttgaaggctaaaaaacaaaaaattcat
gaagtacaaggtgatatgaagaactacttgctgacaagtaaagactgcatttactcatgc
atcgtggccttttcccttgatgttagcacagaagaaaagacacttatcttttggtttaac
aatgaggcataccatgcatcaccgttatctttatcgatattagacaacattatttataaa
catctctctggccccgatgccaccattacggtctccaacaaccctcagcctcaacgtgtc
accaaagacaaatctgatgaaagaagcatatcaggaatccagatagtctttaacttgctc
tttgggatgagtattttcaccagtggcttttgcctcatgacagtgaccgagagagtcagt
aaagcaaagcacatacagtttgtgagcggtgtctataccttgaatttttggctctctgct
ttgctgtgggacctcatcatccacttcgtggcctgtgtcctgctgctgatagtgttccta
tacactgatgtggatatattgttggagaaataccacttcctggacacaatgttcatcctc
atgttgtttggctggtctattatccccttcatctacctgctaagcttctggtacaacaac
agcaccaatgcctacatcaagatctttgtcttcaaccactgtttagggtttatcagtata
attgtggatgctgtggtacaaatcataccagatattaaaaccagtactaagaatctcata
cttaactccatgctgctgttacccatttataactttgggatgagtatctacaaatactat
aacatccacgagataaggaaattatgttcttctttgggatatattaataccattccaagt
tgcaaaagtcaaattattgacattcctatatacagtatgggtcaaaaagcaattggaagg
catgtgactgccatggctgccacaggactgatatactttaccctcattatctttctggag
actacttcatggaatttaaagatcttcatatatcgatatgttctctttggtatctacagg
atattttataaggttagaatgtctgaggagttatctggatactcagaagaggaagatgta
caaaatgaaagagagactatcctgaaccatccttggcgctcactgaattctactgtgctc
attaaagagctcataaagatatattttaaaattccacccactctggctgtgagaaatatc
tctgtctccattcaaaaggaggagtgctttggactgctgggattaaatggagctgggaaa
accactacctttaaaattctgactggagaagagatagctacctctggggatgtgttcatt
gaaggctacagcatcaccagaaatattttaaaggtaaggtcaaaagttggctattgtccg
cagtttgatgccttgctggattacatgacctctcgggagatattgacaatgtatgccagg
gtgtgggggattccagagaagagtattagagcctatgtggacaacttgttgaaaatactg
tatctgaaaccacaggctgataagtttatttacactttgagtggaggaaacaaacgtagg
ctgagcactgccattgctataatgggaaactctacagttgtcttcctagatgagccatcc
actggcatggacccactagcccggcgcatgctctggaatgcagtgataaagacaagggag
agtggcaaggtcatcatcataacctctcacagtatggaggagtgtgaagctctctgtacc
aggctagccatcatggtgcagggaaagtttgtttgcctgggaagcccacagcatctcaag
aacaaatttggcaatatttacaccatgaccatcaagttcaaaactgacaccgatgacaac
acggtacaagatttaaaagattttattgccgaagttttcccaggtagcgacttaaagcaa
gagaatcaagggatccttaattactacattcccagcaagaacaacagctggggaaaggtg
tttggcattctggagaaagcgaaggaggactacaatttagaagattattccatcagtcag
atcacgctggagcaagtcttcctgacctttgccaatccagataacccacggagtggttat
gagaaagcagtgccttga
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integrated database retrieval system
