Mus caroli (Ryukyu mouse): 110298881
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Entry
110298881 CDS
T05910
Symbol
Npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110298881 (Npas1)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
110298881 (Npas1)
BRITE hierarchy
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GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
PAS_4
DUF5349
Motif
Other DBs
NCBI-GeneID:
110298881
NCBI-ProteinID:
XP_029334933
Ensembl:
MGP_CAROLIEiJ_G0029235
UniProt:
A0A6P7R186
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Position
7:complement(15477321..15497887)
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AA seq
594 aa
AA seq
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MATPYPRSGGRGEVKCGGGRGAGVPWDFLPGLMVKAPPGPCLQAQRKEKSRNAARWRRGK
ENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAVGPPAGLA
PGRRGPVALVSEVFEQHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGS
SVFDYIHPGDHSEVLEQLGLRAASIGPPTPPSVSSSSSSSSSSLVDTPEIEASPTEASPA
FRAQERSFFVRMKSTLTKRGLNVKASGYKVIHVTGRLRARALGLVALGHTLPPAPLAELP
LHGHTIVFRLSLGLTILACESRVSDHMDMGPSELVGRSCYQFVHGQDATRIRQSHLDLLD
KGQVVTGYYRWLQRAGGFVWLQSVATVAGNGKSTGEHHVLWVSHVLSNAEGSQTPLDAFQ
LPAIVSQEEPSRPGPEPTEEEPPVDGKQAVPVDQDKDKDPQARSKRIKVEPSPKEARGSE
DSAEEELSDPPAPPRPEFTSVIRAGALKHDPVLPWGLTTPGDPSPALLHAGFLPPVVRGL
CTPGTIRYGPAELSLMYPHLHRLGAGPSLPEAFYPTLGLPYPGPTGTRVQRKGD
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccccctatcccagaagcggtggccgaggtgaagtcaagtgcgggggcggtcgt
ggagccggcgtcccctgggatttcctgcctgggctgatggtcaaggccccgcccggaccc
tgcctgcaggcgcagcgcaaagagaagtcccgcaacgctgcgcgctggcggcgcgggaag
gaaaatctggagttcttcgagctagccaagctgctccctctgcccggtgccatctccagc
cagctggacaaggcgtccatcgtgcgccttagcgtcacctacctccgcctgcgtcgtttt
gccgcgctgggggcgccgccctgggggttgcgggccgtcgggcctccggctggcctcgcc
ccaggccgccgaggccctgtggctctagtctctgaagtcttcgagcaacacctaggtgga
cacatcctacagtccttggatggcttcgtgttcgctttgaaccaggaagggaaatttctc
tacatctcagagacagtgtccatctacctgggtctctcacaggtggagctgacgggcagc
agcgtcttcgactacatccatcctggggaccactcggaggtcctagagcaacttggattg
cgggctgcaagcatcggcccccctacaccaccttccgtgtcctcctcttcctcatcgtct
tcctcctcgctggtggacacccccgagattgaagccagccccaccgaggcatcccctgcc
ttccgagcccaagagcggtccttctttgtccgcatgaagtccaccctcaccaagaggggc
ctgaatgtcaaagcttcagggtacaaggtcattcatgtgacggggcgcctgagggcccga
gccctgggtctcgtagcccttggacacacgctgcccccggccccactggctgagctgcct
ttgcacggacacacgattgtcttccgcctcagcctgggcctcaccatccttgcttgtgag
agcagagttagcgaccatatggacatggggccctcagagcttgtgggacgcagctgctac
cagtttgttcatggacaggatgcaaccaggatccgccaaagccatctggacctgctggac
aaagggcaggtggtgactggttactaccgttggctgcagcgtgcggggggcttcgtgtgg
ctgcagtctgtagccactgtggccgggaacgggaagagcactggggagcatcacgtgctg
tgggtcagtcacgtgctcagcaatgctgaaggtagtcaaacacccctggatgccttccag
cttccagctattgtgtctcaggaggagccatccaggccaggcccagagcccacagaggaa
gagcctccagttgacgggaagcaggctgtgcctgtggaccaggacaaggacaaggaccct
caggcccgaagcaaacgcatcaaagtggagcccagcccgaaggaagctagaggctcagag
gacagtgcagaggaggagctctcggatccaccggctccacctcggccagaattcacttct
gttatccgggcgggagccctgaagcatgatccagtgctgccgtggggcttgacaactccc
ggagacccctcacccgccctccttcatgcaggcttcctgccacccgttgtgcggggtctg
tgcaccccaggcaccatccgctatggccctgccgagttgagtctgatgtatccacatctg
cacaggctgggcgcaggcccctcgcttccagaggccttttaccctacgctgggcttgccc
tatccggggcccacaggtacgagggtgcagcggaagggagactga
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