Mus caroli (Ryukyu mouse): 110298906 Help Entry 110298906         CDS       T05910                                  Symbol Actn4 Name (RefSeq) alpha-actinin-4 isoform X1   KO K05699   actinin alpha 1/4 Organism mcal  Mus caroli (Ryukyu mouse) Pathway mcal04510   Focal adhesion mcal04517   IgSF CAM signaling mcal04518   Integrin signaling mcal04519   Cadherin signaling mcal04520   Adherens junction mcal04530   Tight junction mcal04670   Leukocyte transendothelial migration mcal04810   Regulation of actin cytoskeleton mcal05146   Amoebiasis mcal05203   Viral carcinogenesis mcal05322   Systemic lupus erythematosus Brite KEGG Orthology (KO) [BR:mcal00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     110298906 (Actn4)    04518 Integrin signaling     110298906 (Actn4)    04519 Cadherin signaling     110298906 (Actn4)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     110298906 (Actn4)    04520 Adherens junction     110298906 (Actn4)    04530 Tight junction     110298906 (Actn4)   09142 Cell motility    04810 Regulation of actin cytoskeleton     110298906 (Actn4)  09150 Organismal Systems   09151 Immune system    04670 Leukocyte transendothelial migration     110298906 (Actn4)  09160 Human Diseases   09161 Cancer: overview    05203 Viral carcinogenesis     110298906 (Actn4)   09174 Infectious disease: parasitic    05146 Amoebiasis     110298906 (Actn4)   09163 Immune disease    05322 Systemic lupus erythematosus     110298906 (Actn4)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:mcal04131]     110298906 (Actn4)   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:mcal04812]     110298906 (Actn4)    04147 Exosome [BR:mcal04147]     110298906 (Actn4) Membrane trafficking [BR:mcal04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     110298906 (Actn4) Cytoskeleton proteins [BR:mcal04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Cross-linking proteins      110298906 (Actn4) Exosome [BR:mcal04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    110298906 (Actn4)   Exosomal proteins of colorectal cancer cells    110298906 (Actn4)   Exosomal proteins of bladder cancer cells    110298906 (Actn4) SSDB OrthologParalogGFIT Motif Pfam:  Spectrin CH EFhand_Ca_insen EF-hand_1 EF-hand_6 EF-hand_7 AAA_31 XisI Motif Other DBs NCBI-GeneID:  110298906 NCBI-ProteinID:  XP_021024102 Ensembl:  MGP_CAROLIEiJ_G0029468 UniProt:  A0A6P5PY71 LinkDB All DBs Position 7:complement(28107740..28178039) Genome browser AA seq 912 aa AA seqDB search MVDYHAANQAYQYGPSSGGGNGAGGGGSMGDYMAQEDDWDRDLLLDPAWEKQQRKTFTAW CNSHLRKAGTQIENIDEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDFI ASKGVKLVSIGAEEIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAP YKNVNVQNFHISWKDGLAFNALIHRHRPELIEYDKLRKDDPVTNLNNAFEVAEKYLDIPK MLDAEDIVNTARPDEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYE RLASDLLEWIRRTIPWLEDRVPQKTIQEMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNT LQTKLRLSNRPAFMPSEGRMVSDINNGWQHLEQAEKGYEEWLLNEIRRLERLDHLAEKFR QKASIHEAWTDGKEAMLKQRDYETATLSDIKALIRKHEAFESDLAAHQDRVEQIAAIAQE LNELDYYDSHNVNTRCQKICDQWDNLGSLTHSRREALEKTEKQLETIDQLHLEYAKRAAP FNNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPDADREREAILAIHKEAQRIAE SNHIKLSGSNPYTTVTPQIINSKWEKVQQLVPKRDHALLEEQSKQQSNEHLRRQFASQAN MVGPWIQTKMEEIGRISIEMNGTLEDQLSHLKQYERSIVDYKPSLDLLEQQHQLIQEALI FDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQMQEFRASFNHFDK DHGGALGPEEFKACLISLGYDVENDRQGDAEFNRIMSVVDPNHSGLVTFQAFIDFMSRET TDTDTADQVIASFKVLAGDKNFITAEELRRELPPDQAEYCIARMAPYQGPDAAPGALDYK SFSTALYGESDL NT seq 2739 nt NT seq  +upstreamnt  +downstreamnt atggtggactaccacgcagcgaaccaggcgtaccagtacggcccgagcagcggcggcggc aatggcgcgggtggcggcggaagcatgggcgactacatggcccaggaggatgactgggac cgggacctgctgttggacccggcctgggagaagcagcagcgcaagaccttcacagcctgg tgcaactctcatcttcggaaggctggcactcagatcgagaacatcgatgaggacttcagg gatgggctcaaacttatgcttctgttggaggtcatttcaggggagcgtttgcctaagcca gagcgggggaagatgcgagtgcacaagatcaacaatgtaaacaaagccctggacttcatc gccagcaagggagtcaagctggtgtccatcggggcagaagagattgtggatggcaatgca aagatgaccctgggaatgatctggaccatcatcctcagatttgccatccaggacatctct gtggaagagacctctgctaaggaaggactcctcctctggtgccagagaaagacagccccg tataaaaacgtcaacgtccagaacttccatatcagctggaaggacggtctggccttcaat gcactcatccaccggcaccggcctgagctgattgagtatgacaagctgaggaaggatgat ccagtcaccaacctaaacaatgcatttgaagtggctgagaaataccttgatatccccaag atgttggatgctgaggacatcgtgaacacagcccggcccgacgagaaggccataatgaca tatgtgtccagcttctaccatgccttttcaggagcgcagaaggctgagaccgctgccaac cggatctgcaaggtgctagctgtgaaccaggaaaatgagcacctgatggaagactatgaa cgcctggccagtgatcttctagagtggattcggcgcaccatcccctggctggaggaccgt gtgcctcagaagaccatccaggaaatgcagcagaagctggaggacttccgagactatagg cgtgtgcataagccgcccaaggtgcaggagaagtgtcagttggagatcaacttcaacaca ctgcagaccaagctgcggctcagcaaccggcctgcctttatgccctccgagggcaggatg gtctctgacatcaacaatgggtggcagcacctggagcaggctgagaagggctatgaagaa tggctgttgaatgaaatccgtaggctggaacggcttgaccacctggcagagaagttccgg cagaaggcttccatccacgaggcctggactgatgggaaggaggccatgctgaagcaacgg gactacgagacagccaccctgtcagacatcaaagctctgatccgaaaacatgaggccttt gaaagtgacctggctgcacaccaggaccgcgtggagcagattgctgcaattgcccaggag ctcaacgagctggactactatgactcccacaacgtcaacacacggtgccagaagatctgc gaccagtgggataacctgggctctctgacacacagtcgcagggaagccttggagaaaaca gagaaacagctagagaccatcgaccagctgcatttggagtatgccaagcgggctgcaccc ttcaacaactggatggagagtgccatggaggacctgcaggacatgttcatcgtccacacc atcgaggagatcgagggcctgatctcagcccatgaccagttcaagtccaccctgccagat gctgacagggagcgtgaagccatcctggccatccacaaagaggcccagaggatcgctgag agcaatcacatcaagctgtcgggcagcaatccctacaccaccgttaccccccagatcatc aactccaagtgggagaaggtgcagcagctggtgccaaagcgggaccatgcactcctggag gaacagagcaagcagcaatccaatgagcacctccgccgacagtttgccagccaagccaat atggtggggccgtggatccagaccaagatggaggagatcgggcgcatctccatcgagatg aacgggactctggaagaccagctgagccacctgaagcagtacgagcgcagcatcgtggac tacaagcccagcctggacctgctggagcagcagcaccagctcatccaggaggccctcatc ttcgacaacaagcacaccaactacacaatggagcatatccgtgtgggctgggagcagctg ctcaccaccattgcccgcaccatcaatgaggtggaaaaccagatcctcacccgagatgcc aagggtatcagccaggagcagatgcaggagttccgggcatccttcaaccactttgacaag gaccatggcggggcactggggcctgaggaattcaaggcctgcctcatcagcctgggctac gacgtggagaatgaccggcagggtgatgctgagttcaaccggatcatgagtgtggttgat cccaaccatagtggcctcgtgaccttccaagccttcattgacttcatgtcgagggagacc acagacacagacacagctgatcaggtcatcgcctccttcaaggtcctggcaggagacaag aacttcatcactgctgaggaactgcggagagagctgccccccgaccaggctgagtactgc attgcccgaatggcaccctaccaggggcctgatgctgctcctggcgcccttgactacaag tccttctccacagccctctatggggagagcgacctgtga

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