Mus caroli (Ryukyu mouse): 110298979
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Entry
110298979 CDS
T05910
Symbol
Lrrc4b
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04514
Cell adhesion molecule (CAM) interaction
mcal04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
110298979 (Lrrc4b)
04517 IgSF CAM signaling
110298979 (Lrrc4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcal04515
]
110298979 (Lrrc4b)
Cell adhesion molecules [BR:
mcal04515
]
Immunoglobulin superfamily
NGL family
110298979 (Lrrc4b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_14
LRR_1
ig
LRR_9
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
LRR_EndoS
DUF7617
Ig_MYOM1
Motif
Other DBs
NCBI-GeneID:
110298979
NCBI-ProteinID:
XP_021024189
Ensembl:
MGP_CAROLIEiJ_G0029658
UniProt:
A0A6P7R4J8
LinkDB
All DBs
Position
7:46371661..46404609
Genome browser
AA seq
709 aa
AA seq
DB search
MAQAHIRGSPCPLLPPGRMSWPHGALLLLWLFSPPLRAGGGGVAVTSAAGGGSPPATSCP
AACSCSNQASRVICTRRELAEVPASIPVNTRYLNLQENSIQVIRTDTFKHLRHLEILQLS
KNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAF
NRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSG
NRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFT
PLHRLERVHLNHNPWHCNCDVLWLSWWLKETVPSNTTCCARCHAPAGLKGRYIGELDQSH
FTCYAPVIVEPPTDLNVTEGMAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHD
GTLNFTNVTVQDTGQYTCMVTNSAGNTTASATLNVSAVDPVAAGGPGGGGPGGGGGAGGA
GGYTYFTTVTVETLETQPGEEAQQPRGTEKEPPGPTTDGAWGGGRPDAAAPASASTTAPA
PRSSRPTEKAFTVPITDVTENALKDLDDVMKTTKIIIGCFVAITFMAAVMLVAFYKLRKQ
HQLHKHHGPTRTVEIINVEDELPAASAVSVAAAAAVAGGAGVGGDSHLALPALERDHLNH
HHYVAAAFKAHYGGNPGGGCGAKGPGLNSIHEPLLFKSGSKENVQETQI
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggcccacatccgcggctccccgtgccccttgctgccgcctggtaggatgtcc
tggccccacggggctctcttgctcctgtggctcttctccccacccctaagggctggtggg
ggcggtgtggccgtgacctcagccgctggaggaggctccccgccagccacctcctgccca
gccgcctgctcctgcagcaaccaggccagccgggtgatctgcacgcggagggagctggcc
gaggtgccagccagcatccctgtcaacacccgctacctgaacctgcaagagaacagcatc
caggtgatccgcacggacacattcaagcacctccggcacctggagatcctacagctgagc
aagaacctggtgcgcaagatcgaggtgggagcattcaatgggctgcccagtctcaacaca
ctggaactcttcgacaaccggctgacaaccgtgcccacgcaggcctttgagtacctgtcc
aagctccgggagctgtggctgcgcaacaaccccatcgaaagcatcccatcctatgccttc
aaccgtgtgccctcactgcgccgcctagacctgggcgagctgaagaggctggagtacata
tcggaggcggccttcgaggggctggtgaacctgcgctacctcaacctgggcatgtgcaac
ctaaaggacatccccaacctcacagcacttgtgcgcctggaggagctggagctgtccggg
aaccggctggacctaattcgccccggctccttccagggcctcaccagtctgcgcaagctg
tggctgatgcatgcccaagtggccaccatcgagcgaaacgccttcgacgacctcaagtcg
ctggaggagctgaacctgtcccacaacaacctgatgtcgctgccgcacgaccttttcacg
ccccttcaccgcctggagcgtgtccacctgaaccacaacccctggcactgtaactgtgat
gtgctgtggctcagctggtggctgaaggagacagtgcccagcaataccacatgctgcgca
cgctgccatgcgcccgccggcctcaagggccgctacatcggtgagctggaccagtcgcac
ttcacctgctatgccccggtcatcgtggagccacccacagacctcaatgtcaccgagggc
atggcggctgagctcaagtgccgcacaggcacatccatgacgtcggtcaactggctgaca
cctaatggcacgctcatgacgcacggttcctatcgtgtgcgcatttcggtgctgcacgat
ggcacactcaacttcaccaatgtcaccgtgcaggacacgggccagtacacgtgcatggtg
acaaactcggcaggcaacactactgcctcggccacgcttaacgtgtcggctgtggacccc
gtggctgcgggagggcccggtggcgggggtccagggggtgggggcggtgcagggggcgcg
ggtggatacacctacttcaccacggtgaccgtggagacgctggagacgcagccgggggag
gaggcccagcagccccgaggtactgagaaggagcccccggggcccacgactgatggcgcg
tggggcggcggccggcctgatgctgcagccccggcctcggcgtccaccacggcaccggcc
ccgcgctcctcgcgacccacggagaaggctttcacggtgcccatcacggacgtgacggag
aatgcgcttaaggacctagacgatgtcatgaagaccaccaaaatcatcatcggctgcttc
gtggccatcaccttcatggccgccgtgatgctggtggccttctacaagctgcgcaagcag
caccagctgcacaagcaccacgggcccacgcgcactgtggagatcatcaacgtggaggac
gagctgcccgccgcctccgctgtgtcggtggctgcggccgccgcggtggctggaggcgcg
ggcgtgggtggggacagccacctggcccttccggcgctggagcgagaccacctcaatcac
caccactacgtggcggccgccttcaaggcgcactacggcggcaacccgggaggcgggtgc
ggggccaagggccccggcctcaactccatccacgaacctctgctcttcaagagcggctcc
aaggagaacgtgcaagagacacaaatctaa
DBGET
integrated database retrieval system
