Mus caroli (Ryukyu mouse): 110299344
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Entry
110299344 CDS
T05910
Symbol
Tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcal03036
]
110299344 (Tdrd12)
Enzymes [BR:
mcal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
110299344 (Tdrd12)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Gene silencing
piRNA pathway
110299344 (Tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
110299344
NCBI-ProteinID:
XP_021024679
Ensembl:
MGP_CAROLIEiJ_G0029587
UniProt:
A0A6P5Q751
LinkDB
All DBs
Position
7:complement(34646971..34731372)
Genome browser
AA seq
1292 aa
AA seq
DB search
MLIYFKYPVYELTSVEHAGKKITIEDPGCFWVIIKGCSHFLEQEVDYQKLNSAMNDFYNS
MCQDVEMKPLMLEEGQVCVVYCQELKCWCRALIKSIISSADHYLAECFLVDFAKYIPVKS
KNIRVAVESFMQLPYRAKKFRLYGTKPVTLHIDFCEDNAEIVPATKWDSAAIQYFQSIVR
ATTQVEAKLCAVEEDTFEVYLYATIKNEKVCVNDDLVAKNFAYYVSPMGNKNLNNLEKPR
QRLNSVPCSSKLSPSLTLWPMLLQGKDYHRVESKAVNYKDSLTDSPEMMLEKKQQSLPLK
HMDKCIESSVYWPTKRGITIYADPDVPSGSGSSQKPNEKPRRLTEKKDCDEKNGCVKLLQ
FLNPDPLRADGTSDLHQLQKVKLGTLQPGVVLRNRIEPCLTLEKSPLSADLKKALQRNKF
PGPSHTASYSWPPIARGCDMVVISHCGNDPLLYLPPLLTILQMGGCYKSLPSRNGPLAVI
VCPGWKKAQFIFELLGDYSMSSRPLHPVLLTIGLHKDEAKNMKLPRGCDVIVTTPHSLLR
LLTYRSLLFLRLCHLVLDEVHVLFFEANEQMFAILDNFKKNVEVEERESAPHQIVAVGVH
WNRHIDHLVREFMKDPYVVITALEEAALYGSVQQVVHLCLECEKTSTLLQVLDFVPSQAQ
KTLIFTCSVAETEIVCKVVESNSIFCLKMHKEMTFNLKSILEQWKKKLSPGSHIVLTLTD
DCIPLLAITDATCVIHFSFPSSPKIFGGRLYCMSDHFQSLTEQGSPAEQGDKKTKSVLLL
TERNASHAVGVLRYLERADAKIPSELYEFTAGVLEAKEDKKARRPLCPYLKAFGFCKDKR
ICPDRHHINPEMDIPRKLSSKTLPVFGHIRVIPFYISNATNYFGRIIDKHVDLYETLNAE
MNEYFKESSNKTAAKKVENLGLYGLEEKTLFQRVQVLDVSQKEDTWGLGSVLVKFIDEGR
TKLITRDQLLLLPEKFHTLPPQAVEFIVCRVKPADSEIEWNPKVTRYIHHKIVGKTHDAK
VVLALGNTLWIDPMVHVTKLSNLKTSIIDYNVRAEILSMGMGIDNSEHLEQLKKLYKEAK
LPAFEDLPCQTSIPTTVEDTVCLQGTQQGDGGTERGAGFQEDSDNQKPGVLSGDIGSETI
SKAPQPHGRSFHPQIKWFQKDDVVILKIKIRNVKDYKCKFFTDRVIFSAWVGDKFYLADL
ELQGDIRKDDCKCIIKDDEPLITLAKEKQECWCGLLKQRNPNVAFDFDHWEEYEEDSPFS
KVVNSKNLSCKVAALAESSGSSSDTTDGSESE
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgctaatatacttcaaatatccagtatatgaactgacctcagtggaacatgcaggaaaa
aaaatcacaattgaagatccaggttgcttctgggtaattataaaaggatgtagtcatttt
ttagaacaagaagttgactaccaaaaactaaacagtgccatgaatgacttctataacagc
atgtgtcaagatgtagaaatgaaaccattaatgctggaagaagggcaggtgtgtgtggtg
tactgccaggagctgaagtgctggtgcagggctctgattaagtccatcatctcttctgca
gaccattacctggcagagtgtttcctggtggattttgccaagtatattccagtaaaatct
aaaaacatccgagttgcagtagagtcttttatgcagcttccttacagagcaaaaaaattc
agactttacggtacaaagcctgtgacattgcacattgacttctgtgaagacaatgctgag
attgtacctgccacaaaatgggacagtgcagccatccagtactttcagagcattgtaaga
gcaactacccaagtggaagcaaaactatgtgctgtggaagaagatacttttgaggtttac
ctttatgcaacaataaaaaatgaaaaagtttgtgttaatgatgacctagttgcaaagaat
tttgcttattatgtgtcaccaatggggaataaaaacctcaataatttggagaaacccagg
cagcgtctcaattcggtgccctgctccagtaagctcagcccatcacttactctgtggcca
atgcttctacaaggaaaagactatcacagagtggaaagtaaagctgtaaactataaggat
tccttgacagactcgcctgaaatgatgcttgagaagaagcagcagagcctccccttaaag
cacatggacaagtgtattgaatcttctgtgtactggccaacaaaaagaggcataaccata
tatgctgatccagatgttccatcaggaagtgggtctagccagaagccgaatgagaagcca
cggcggttgactgaaaagaaagactgtgacgagaagaacggctgtgtaaaattactgcag
tttctaaatcctgatcctttgagagctgatgggacctctgacctgcaccagttgcagaag
gtgaagctgggcacactgcagcctggggtggtgctccggaacaggatcgagccctgccta
accctggagaaatcacctctgtcggcggacctgaagaaggctcttcaaagaaacaagttc
ccaggacccagccacaccgcatcttactcctggcctcctattgcacgtggctgtgatatg
gttgtcatttctcactgtgggaatgaccccttgttgtacctgccaccgctgcttacgatt
ttgcagatggggggctgctacaagtcattaccaagtagaaatggacctcttgcagtcatc
gtgtgtcctgggtggaaaaaggctcagtttatttttgagttattgggagactatagcatg
tcctccaggcctcttcatcctgtgttattaacaattggacttcacaaagatgaagccaaa
aatatgaagcttccaagggggtgtgatgtgattgtcacaacgccacacagccttttgaga
cttcttacgtaccgaagcttgttattccttagactctgccacctggttctggatgaagtg
cacgtgctgttctttgaagctaatgagcaaatgtttgccatattagataactttaaaaaa
aacgttgaagtggaggagcgggagtctgcaccccaccagattgtagccgtgggtgttcac
tggaacagacacatagaccatctagtcagagagttcatgaaggatccttacgtcgtgatc
accgccttggaggaggctgccctctatggcagtgttcagcaggtagtgcatctgtgcctg
gagtgtgagaagacctctactttactccaagttcttgactttgttccaagtcaggcccag
aagaccttgatcttcacctgttctgtagcagagacagagattgtatgtaaggtagtagaa
agcaattcaatattttgcttgaaaatgcataaagagatgacttttaatttaaaaagtatt
ttggagcagtggaagaagaagttaagccctggctcccacattgtgttaaccttaacagat
gactgcataccactcctggccatcaccgatgccacgtgcgtgattcacttcagctttcct
tcctcaccaaaaatatttggtggacgcctgtattgcatgtctgatcattttcagagttta
actgaacagggttcacctgcagagcagggagataagaaaactaaatctgtcttgctgctg
acggagaggaatgcaagccatgctgttggtgtcctgcgatacttggagcgagcagatgcc
aaaattccatcagagctgtatgagtttacagcaggggtcctggaagccaaagaagataag
aaggccagaagacctctttgtccatatcttaaagcttttggcttttgcaaagacaaaagg
atctgtcctgaccggcaccacattaatccagaaatggacatcccaaggaaattatccagt
aaaacactaccagtgtttggacacattagggtaatacctttttacatttcaaatgcaacc
aattactttggtcgtataattgataaacatgtggatctttatgaaactcttaatgcagaa
atgaatgaatattttaaggagtccagtaataaaacagctgctaaaaaggtggagaatttg
gggttgtatggattagaagaaaaaacacttttccagagggttcaggtgttggacgtgagc
cagaaggaagacacctggggtttggggagtgtcctggtgaaattcatagatgaaggcagg
accaagctcatcacaagagaccagctgctgctgctccctgagaagttccacactctgccc
cctcaggctgtggagttcattgtttgtagggttaaaccagctgacagtgaaattgaatgg
aacccaaaggttaccagatacatccaccataaaattgttgggaaaacgcatgatgctaaa
gtagtgctggctctgggaaacaccctttggatcgacccaatggtacatgttacaaaactt
tcaaatctaaaaacttctatcattgattataatgttcgagctgaaattttatccatggga
atgggtattgataattcagaacacctagaacaactgaaaaaactatacaaagaagctaaa
ctgccagcctttgaggaccttccgtgccagacctcgatacctacaacagtagaagacacc
gtgtgtttgcagggcactcagcaaggagacggaggtacagaaagaggagctggtttccag
gaggactcagataaccaaaagcctggagttttatctggagacattggcagcgagaccatt
agcaaagctccacagccacatggaagaagctttcacccacaaataaagtggttccaaaaa
gatgatgtggtcatcttaaagataaaaataaggaatgtcaaagattataagtgtaaattc
tttacagatagagtcattttcagtgcctgggtaggagacaagttttacttggctgatctg
gaactgcaaggtgacataaggaaagatgactgcaaatgcataattaaggatgatgaacct
ctaatcacacttgcaaaagagaaacaggagtgctggtgtggcctcctcaagcagaggaat
cctaatgtggcttttgactttgaccactgggaggagtatgaggaggacagccctttctcc
aaggttgtaaattctaaaaacctgtcctgcaaagtggcagcgttggctgagagcagcggt
tcctcttcagacactactgatggaagtgagagtgagtga
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