Mus caroli (Ryukyu mouse): 110299465
Help
Entry
110299465 CDS
T05910
Symbol
Trpm1
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcal04040
]
110299465 (Trpm1)
Ion channels [BR:
mcal04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
110299465 (Trpm1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
Ion_trans
YVC1_C
LSDAT_prok
EBNA2_Core
Glutaredoxin2_C
Motif
Other DBs
NCBI-GeneID:
110299465
NCBI-ProteinID:
XP_021024828
Ensembl:
MGP_CAROLIEiJ_G0029825
UniProt:
A0A6P5Q502
LinkDB
All DBs
Position
7:66972104..67087366
Genome browser
AA seq
1622 aa
AA seq
DB search
MGSMRKMSSSFKRGSIKSSTSGSQKGQKAWIEKTFCKRECIFVIPSTKDPNRCCCGQLTN
QHIPPLPSGAPSTTGEDTKQADTQSGKWSVSKHTQSYPTDSYGILEFQGGGYSNKAMYIR
VSYDTKPDSLLHLMVKDWQLELPKLLISVHGGLQSFEMQPKLKQVFGKGLIKAAMTTGAW
IFTGGVSTGVVSHVGDALKDHSSKSRGRLCAIGIAPWGMVENKEDLVGKDVTRVYQTMSN
PLSKLSVLNNSHTHFILADNGTLGKYGAEVKLRRQLEKHISLQKINTRLGQGVPLVGLVV
EGGPNVVSIVLEYLKEDPPVPVVVCDGSGRASDILSFAHKYCDEGGVINESLRDQLLVTI
QKTFNYSKSQSYQLFAIIMECMKKKELVTVFRMGSEGQQDVEMAILTALLKGTNASAPDQ
LSLALAWNRVDIARSQIFVFGPHWPPLGSLAPPVDTKAAEKEKKPPTATTKGRGKGKGKK
KGKVKEEVEEETDPRKLELLNWVNALEQAMLDALVLDRVDFVKLLIENGVNMQHFLTIPR
LEELYNTRLGPPNTLHLLVRDVKKSNLPPDYHISLIDIGLVLEYLMGGAYRCNYTRKSFR
TLYNNLFGPKRPKALKLLGMEDDEPPAKGKKKKKKKKEEEIDIDVDDPAVSRFQYPFHEL
MVWAVLMKRQKMAVFLWQRGEECMAKALVACKLYKAMAHESSESELVDDISQDLDNNSKD
FGQLAVELLDQSYKHDEQVAMKLLTYELKNWSNSTCLKLAVAAKHRDFIAHTCSQMLLTD
MWMGRLRMRKNPGLKVIMGILIPPTILFLEFRTYDDFSYQTSKENEDGKEKEEENVDANA
DAGSRKGDEENEHKKQRSIPIGTKICEFYNAPIVKFWFYTISYLGYLLLFNYVILVRMDG
WPSPQEWIVISYIVSLALEKIREILMSEPGKLSQKIKVWLQEYWNITDLVAISMFMVGAI
LRLQSQPYMGYGRVIYCVDIILWYIRVLDIFGVNKYLGPYVMMIGKMMIDMLYFVVIMLV
VLMSFGVARQAILHPEEKPSWKLARNIFYMPYWMIYGEVFADQIDLYAMEINPPCGENLY
DEEGKRLPPCIPGAWLTPALMACYLLVANILLVNLLIAVFNNTFFEVKSISNQVWKFQRY
QLIMTFHDRPVLPPPMIILSHIYIIIMRLSGRCRKKREGDQEERDRGLKLFLSDEELKKL
HEFEEQCVQEHFREKEDEQQSSSDERIRVTSERVENMSMRLEEINERENFMKTSLQTVDL
RLSQLEELSGRMVSALENLAGIDRSDLIQARSRASSECEATYLLRQSSINSADGYSLYRY
HFNGEELLFEEPALSTSPGTAFRKKTCSFRVKDEDAKSHLDQPSNLHHTPGPSPPATPGR
SRLALDGPLSTELRPGPDPGISAGELDPRADFKSTEAAPSLNAADITGTQLTVESTDSHP
LRESKLVRYYPGDPNTYKTMKSRSFVYTEGRKLVRGVSNWGAEYSSIMDQAWNAAEWRCQ
VQRITRSRSTDIPYIVSEAASQDELEDEHRGSLLDPQISRSALTVSDRPEKENLLSVKPH
QTLGFPCLRSRSLHGRPRSAEPAPNKLDRAGHASSTSNLAVMSVAPEGQNTQQEKRSTET
EC
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atggggtccatgaggaagatgagcagctccttcaagcgtggttcaatcaagagctccaca
tcagggtcccagaagggtcagaaagcatggatagagaagacattttgcaaaagggaatgc
atctttgtaattcccagtacaaaagaccctaacagatgttgctgtggtcagctcactaac
cagcacattcctcctctgccgagcggggctcccagcacaacaggagaggacaccaagcag
gcagacacgcagtctgggaagtggtctgtcagcaaacacacccagagctacccaacagac
tcctatgggattctcgaattccagggtgggggttactccaataaagccatgtacatccga
gtctcctacgacaccaagccagattccctgctccacctcatggtgaaggactggcagctg
gagctcccaaagctcttgatatctgtgcacggaggcctccaaagcttcgagatgcagccc
aaactgaagcaggtgtttgggaaaggtctgatcaaggctgccatgaccactggggcgtgg
atcttcaccgggggtgtgagcactggtgtcgtcagccatgtgggggatgccttgaaagac
cactcctccaagtccagaggccggctctgtgctataggaattgctccctggggcatggtg
gagaacaaggaagacctggttggaaaagatgtaacaagagtctatcagaccatgtccaac
cctctgagcaagctctctgtgctcaacaattcccacactcacttcatcttggctgacaac
ggcaccctgggcaagtatggtgctgaggtgaagcttcgaagacagctggaaaaacacatc
tccctgcagaagatcaacacaaggctgggccagggtgtacctctcgtgggcctagtggta
gaaggtggtcctaacgtggtttctatcgtcctggagtatctcaaagaagaccctcctgtc
cctgtggtggtttgcgatggcagtggacgtgcctctgacattttgtccttcgcacacaaa
tactgcgacgaaggaggagtcataaacgagtccctgcgggaccagcttctagttaccatt
cagaaaacatttaattacagcaagtcccagtcgtatcagctgtttgcaattatcatggag
tgcatgaagaagaaagaactcgtcactgtgtttcggatgggttccgagggtcagcaagat
gttgagatggcaattttaactgccttgctcaaaggaaccaacgcatcagctccagatcag
ctgagcttggccctggcttggaaccgggtcgacatagcgcgaagccagatcttcgtcttt
ggcccacactggccgccactgggaagcctggctcctcctgtggacaccaaagccgcagag
aaggaaaagaagccacccacagccaccaccaaggggagaggaaaaggaaaaggcaagaag
aaaggcaaagtgaaagaggaagtggaggaagagacggacccccggaagcttgagctgctc
aactgggtgaatgccctggagcaagccatgctggatgctcttgtcctagatcgggtggac
tttgtgaagctcctgattgaaaacggagtgaacatgcagcatttcctcaccatcccgagg
ctggaggagctttacaacaccagactgggcccaccaaacacccttcatctgctggtgcgg
gatgtaaagaagagcaaccttccacctgattaccacatcagcctcattgatataggactg
gtgctggagtacctcatgggcggtgcctaccgctgcaactacactcggaaaagcttccgg
actctctacaacaacttgtttggccctaagaggccgaaagcacttaagcttctgggaatg
gaagatgatgaacccccagccaaaggcaagaagaaaaagaagaagaagaaagaggaagaa
attgacatcgacgtggacgaccccgccgtgagtaggttccagtacccgttccatgagctc
atggtatgggccgtgctcatgaagcgccagaagatggcggtcttcctgtggcagcgtggg
gaagagtgcatggcgaaggccttggtggcctgcaagctctacaaggccatggcccacgag
tcctccgagagcgagttggtggatgacatctcccaagatctggacaacaattccaaagat
tttggccagctcgccgtggagctgttagaccagtcttacaagcacgatgagcaggttgcc
atgaaacttctgacctacgagctcaagaactggagcaactcaacctgcctgaagctggct
gtggcagccaagcaccgggacttcattgctcacacctgcagccagatgctgctgacagac
atgtggatgggaaggcttcgcatgaggaaaaaccctggcctgaaggtcatcatggggatc
cttatcccacccaccatcttgtttttggaattccgtacatatgatgacttctcctatcaa
acatccaaggagaacgaagatggcaaagaaaaggaagaagagaatgtggatgcaaatgca
gatgctggctcgagaaagggggatgaggagaatgagcacaaaaagcagaggagcattccc
attggaacaaagatctgtgaattctataatgcgcccattgtcaagttctggttttacaca
atttcctacttgggctacttgctgctgttcaattatgtcatcctggtgcggatggatgga
tggccatcaccccaagaatggattgtcatctcctacattgtgagccttgcattggagaaa
atccgagagatcctcatgtcggaaccaggcaaactcagccagaaaatcaaagtgtggctc
caggagtactggaacatcacagacctcgtggccatctccatgttcatggttggggccatc
cttcgtctccagagtcagccgtacatgggctatggccgggtcatctactgtgtggatatc
atcctctggtacatccgagtgttagacatctttggtgtcaacaaatatcttggtccctat
gtgatgatgattggaaagatgatgattgacatgctctactttgtggtcattatgctggtt
gtgctgatgagttttggagtggctcggcaagccatcttgcatccggaggagaagccttcc
tggaaactggcccgaaacatcttctacatgccgtactggatgatctacggagaggtgttt
gcagaccagatagacctctacgccatggaaatcaaccctccttgtggtgagaatctctac
gatgaggaaggcaagaggctccctccctgcatccctggtgcctggctcacacctgccctc
atggcctgttatctcctggtggccaatatcctgctggtcaacctactgattgctgttttc
aacaataccttctttgaagtcaagtcaatatccaatcaagtgtggaagttccagcgatac
caactgatcatgacatttcacgacaggccggtcctgcccccgccaatgatcatcttaagc
cacatctatatcatcattatgcgtctcagcggtcgctgcagaaaaaagagagagggggac
caggaggagcgggaccgtgggttgaagttgttcctcagcgacgaagaactgaaaaaactg
catgagtttgaggagcagtgcgtgcaggagcacttccgggaaaaggaggatgagcagcag
tcgtccagcgacgagcgcatccgggtcacaagcgagagggttgaaaatatgtcaatgaga
ttggaggaaatcaacgaaagagaaaatttcatgaaaacttctctgcagactgttgacctt
cggctctctcagctggaggagctatctggcaggatggtgagcgctctggagaatctggca
ggcatcgacagatctgatctgatccaggctcgatctcgagcatcctcagaatgcgaggcc
acctacctgctgcggcagagcagcatcaacagtgccgatggctacagcttgtatcgctac
catttcaatggcgaggagcttctgtttgaggagcctgctctctccacttcgccagggaca
gcgttccggaaaaagacctgctcctttcgcgtgaaggacgaggatgcaaagtcgcacctg
gaccagcccagcaacctgcaccacacccctggccccagcccacctgccacgccaggccgc
agccggctcgcccttgacggtcccttgagcacagagctgagacctggaccggaccctggc
atctccgcaggcgagctcgatccgcgggcggatttcaagagcaccgaagctgcaccaagt
ctgaacgcagcggatattacaggcactcaactgactgttgaaagcactgattcccaccct
ctgcgggagagcaaactcgtgcgctactaccccggagaccctaacacctacaaaacaatg
aagtccagaagcttcgtctatactgaaggaagaaagctagttcgaggtgttagcaactgg
ggtgcagagtacagttcaatcatggaccaagcatggaacgcggcagaatggagatgtcaa
gttcaaaggatcacgcgctcccgcagcacagacatcccatacatcgtgtccgaagcagcc
tcgcaagatgagcttgaagatgagcacagaggatctcttctggatcctcagatctcccgt
tcagccctcacagtctccgacaggccagaaaaggaaaacttactgtctgtgaagccacat
cagactttaggattcccctgcctacggtcaagaagtttacatggccgtcctaggagtgct
gagcccgctcctaacaaattagacagggcaggacatgccagcagcactagcaacttagca
gttatgtcagttgctccagagggacaaaacacccagcaagagaaaagaagcacggaaact
gaatgctga
DBGET
integrated database retrieval system
