Mus caroli (Ryukyu mouse): 110299557
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Entry
110299557 CDS
T05910
Symbol
Atxn1l
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin 1/1L
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04330
Notch signaling pathway
mcal05017
Spinocerebellar ataxia
mcal05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110299557 (Atxn1l)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
110299557 (Atxn1l)
05022 Pathways of neurodegeneration - multiple diseases
110299557 (Atxn1l)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AXH
ATXN-1_C
Motif
Other DBs
NCBI-GeneID:
110299557
NCBI-ProteinID:
XP_021024919
Ensembl:
MGP_CAROLIEiJ_G0031548
UniProt:
A0A6P5QC60
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Position
8:complement(100818644..100829041)
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AA seq
687 aa
AA seq
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MKPVHERSQECLPPKKRDLPVTSEDMGRTTSCSTNHTPSSDASEWSRGVVVAGQSQTGAR
VSLGGDGTEAITGLTVDQYGMLYKVAVPPATFSPTGLPSVVNMSPLPPTFNVASSLIQHP
GIHYPPVHYAQLPSTSLQFIGSPYSLPYAVPPNFLPSPLLSPSANLATTHLPHFVPYASL
LAEEATPPPQAASPAQSFNKSSAATSPPGQLPQHSNTQPLDLAPGRMPIYYQMSRLPAGY
TLHETSTAGASPILTPQEGQSALEAAAANGQRQRERNVRRESEALDSANSKGESQGLVPV
VECVADGQLFSGSQTPRVEVAAPAHRGTPDTDLEVQRVVGALASQDYRVVAAQRKDEPSP
LNLSHHNLDHQGEGRGSARNPTELVEKSQARVFYPQSHQEPVKHRPLPKAMVVANGNLVP
TGTDPSLLPVGSEILVASSLDLQARATFPDKEPTPPPVTSSHLPSHFMKGAIIQLATGEL
KRVEDLQTQDFVRSAEVSGGLKIDSSTVVDIQESQWPGFVMLHFVVGEQQSKVSIEVPPE
HPFFVYGQGWSSCSPGRTAQLFSLPCHRLQVGDVCISISLQSLNSNSVSQASCAPPGQLG
TPRERPERTVLGPRDLCDSEGKNQPSGEGSRVGEPSQPEPGAQACWPAPSFQRYSMQGEE
ARAALLRPSFIPQEVKLSIEGRSNAGK
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctgttcatgagcggagtcaggaatgccttccaccaaagaaacgagacctccct
gtgaccagcgaggatatggggagaactaccagctgctccacaaaccacacaccctccagt
gatgcttctgaatggtcccgaggggttgtggtggctgggcagagccagacgggagccaga
gtcagcctcgggggtgatggaactgaggccatcactggcctgacagtagatcagtatggc
atgctgtacaaggtggctgtgccacctgccaccttctcaccaactggcctcccatctgtt
gtgaacatgagccccttaccccccacatttaatgtagcgtcttcactgattcaacatccg
ggaatccactatcccccagtccactatgctcagctcccatccacctcactgcagtttatt
gggtctccatacagccttccttatgctgtgccacctaacttcctacccagtcctctcctg
tctccttctgccaaccttgccaccactcaccttccacactttgtgccatatgcctctctc
ctcgcagaagaagctactcctcctccacaggccgcatccccagctcagtcgtttaacaag
tcctccgctgccacctccccgcccggccagttgccacagcactcgaatactcaaccactg
gatcttgctccaggccggatgcccatttattatcagatgtctaggctacctgctggatat
accttgcatgaaacttcaacagcaggtgccagccccattcttactcctcaggagggccag
tctgctctggaagcagctgctgccaatggacagagacaacgagagcgaaatgtaagacgt
gaaagtgaagcccttgactctgccaacagcaagggtgaaagccaaggactggtgccggtg
gtggaatgcgtggcagatggacagttgttttcaggttctcagactccgagagtggaggtg
gcggcgccagcacatcgagggaccccagacaccgacctagaggtccagcgggtagttggc
gctttagcttctcaggactatcgtgtggtggcagctcagaggaaagatgagcccagccct
cttaacctatcccatcataaccttgaccatcagggtgagggacgagggtctgccaggaat
cctacagaactggtggagaaaagtcaggcccgtgtgttctacccgcagtcccatcaggaa
ccagtaaaacacagacctttacccaaagcaatggttgtagccaatggcaacctggtgccc
actggaactgaccctagcctgctgcctgtgggctcagagatcctggtggcatcaagtctg
gacctgcaggccagagccaccttcccagacaaggagccaacgccacctcccgttacctcc
tcccacctgccctcccatttcatgaaaggcgccatcattcagctggctacaggggagctg
aagcgggtagaggacctccagacccaggattttgtgcgcagtgcggaagtgagtgggggg
ctgaaaattgactctagcacagttgtggatattcaggagagccagtggcctggatttgtt
atgctgcatttcgtggttggtgaacagcagagcaaagtgagcattgaggtgccccctgag
caccccttttttgtatatggccagggttggtcctcctgcagccctgggcggactgcacaa
ctcttctctctgccctgccatcggctacaggtgggagatgtctgcatctctatcagttta
cagagcttgaacagtaactcagtttctcaggccagctgtgctcccccagggcagctgggt
acaccccgagaaaggcctgagaggacggtcttggggcccagagacctatgtgacagcgag
gggaagaaccagccttcaggagagggttcccgggtgggagagccctcccagcctgagcct
ggtgctcaggcctgctggccagccccaagcttccaaagatacagcatgcaaggggaggag
gcacgggctgcactgctccgtccctctttcattccacaggaggtaaagctgtccatcgaa
gggcgttccaatgcaggaaaatga
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