Mus caroli (Ryukyu mouse): 110299641
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Entry
110299641 CDS
T05910
Symbol
Lamp1
Name
(RefSeq) lysosome-associated membrane glycoprotein 1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03272
Virion - Hepatitis viruses
mcal03273
Virion - Lassa virus and SFTS virus
mcal04140
Autophagy - animal
mcal04142
Lysosome
mcal04145
Phagosome
mcal05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
110299641 (Lamp1)
03272 Virion - Hepatitis viruses
110299641 (Lamp1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110299641 (Lamp1)
04142 Lysosome
110299641 (Lamp1)
04140 Autophagy - animal
110299641 (Lamp1)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
110299641 (Lamp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110299641 (Lamp1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcal04147
]
110299641 (Lamp1)
04090 CD molecules [BR:
mcal04090
]
110299641 (Lamp1)
Membrane trafficking [BR:
mcal04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
110299641 (Lamp1)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
110299641 (Lamp1)
Other autophagy associated proteins
RNautophagy/DNautophagy
110299641 (Lamp1)
Exosome [BR:
mcal04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
110299641 (Lamp1)
CD molecules [BR:
mcal04090
]
Proteins
110299641 (Lamp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
TSKS
CTV_P6
Motif
Other DBs
NCBI-GeneID:
110299641
NCBI-ProteinID:
XP_021025038
Ensembl:
MGP_CAROLIEiJ_G0030835
UniProt:
A0A6P5QCD5
LinkDB
All DBs
Position
8:9614360..9631598
Genome browser
AA seq
406 aa
AA seq
DB search
MAAPXARRPLLLLLLAGLAHGASALFEVKDNGTACIMANFSASFLITYETANGSQIVNIP
LPASAEVLKNGSSCGKENVSEPSLTITFGRGYLLTXNFTKNATRYSVQHMYFTYNLSDTE
HFPNASSKEMYTVNSTTDIKADINKAYRCVSDIRVYMKNVNVVLRDATIQAYLSSGNFSK
EETHCTQDGPSPTTGPPSPSPPLVPTNPTVSKYNVTGNNGTCLLASMALQLNITYLKKDN
KTVTRAFNISPNDTANGSCGVNLVTLKVENKNRALELQFGMNASSSLFFLQGVQLNMTLP
DALVPTLSISNHSLKALQATVGNSYKCNTEEHIFVSKMLSLNVFSVQVQAFRVDSDRFGS
VEECVQDGNNMLIPIAVGGALAGLVLIVLIAYLIGRKRSHAGYQTI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccccgncgcccggcggccgctgctcctgctgctgctggcaggccttgcacat
ggcgcctcagcactctttgaggtgaaagacaatggcacagcgtgtataatggccaacttc
tctgcctcctttctgatcacctacgagactgcgaatggttctcagatcgtgaacatcccc
ctgcccgcctctgcagaagtactgaaaaatggcagttcttgtggtaaagaaaatgtttct
gaacccagcctcacaattacttttggaagaggatatttactgacantcaacttcacaaaa
aatgcaacacgctacagtgtccagcatatgtattttacatataacttgtcagatacagaa
cattttcccaatgccagcagcaaagagatgtacaccgtgaattccacaactgacatcaag
gcagacatcaacaaagcataccggtgtgtcagtgatatccgggtctacatgaagaatgtg
aacgttgtgctccgggatgccactatccaggcctacctgtcgagtggcaacttcagcaag
gaagagacacactgcacacaggatggaccttccccaaccactggnccacccagcccctca
ccaccacttgtgcccacaaaccccactgtgtccaagtacaatgtgactggtaacaacgga
acctgcctgctggcctctatggcactgcaactgaacatcacctacctgaaaaaagacaac
aagactgtgaccagagcgtttaacatcagcccaaatgacacagctaatgggagttgcggt
gtcaacttggtgaccctgaaagtggagaacaagaacagagccctggaattgcagtttggg
atgaatgccagctctagcctgtttttcctgcaaggagtgcagttgaatatgactcttcct
gatgccctagtgcccacattgagcatctccaaccattcactgaaagctcttcaggccact
gtgggaaactcatacaagtgcaacactgaggaacacatctttgtcagcaagatgctctcc
ctcaatgtcttcagtgtgcaggtccaggctttcagggtggacagcgacaggtttgggtct
gtggaagagtgtgttcaggatggtaacaacatgttgatccccattgctgtgggcggtgcc
ctggcagggctggtcctcatcgtcctcattgcctacctcattggcaggaagaggagtcac
gccggctatcagaccatctag
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