Mus caroli (Ryukyu mouse): 110299672 Help Entry 110299672         CDS       T05910                                  Symbol Col4a2 Name (RefSeq) collagen alpha-2(IV) chain   KO K06237   collagen type IV alpha Organism mcal  Mus caroli (Ryukyu mouse) Pathway mcal04151   PI3K-Akt signaling pathway mcal04510   Focal adhesion mcal04512   ECM-receptor interaction mcal04820   Cytoskeleton in muscle cells mcal04926   Relaxin signaling pathway mcal04933   AGE-RAGE signaling pathway in diabetic complications mcal04974   Protein digestion and absorption mcal05146   Amoebiasis mcal05165   Human papillomavirus infection mcal05200   Pathways in cancer mcal05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:mcal00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     110299672 (Col4a2)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     110299672 (Col4a2)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     110299672 (Col4a2)   09142 Cell motility    04820 Cytoskeleton in muscle cells     110299672 (Col4a2)  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     110299672 (Col4a2)   09154 Digestive system    04974 Protein digestion and absorption     110299672 (Col4a2)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     110299672 (Col4a2)   09162 Cancer: specific types    05222 Small cell lung cancer     110299672 (Col4a2)   09172 Infectious disease: viral    05165 Human papillomavirus infection     110299672 (Col4a2)   09174 Infectious disease: parasitic    05146 Amoebiasis     110299672 (Col4a2)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     110299672 (Col4a2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:mcal04147]     110299672 (Col4a2)    00536 Glycosaminoglycan binding proteins [BR:mcal00536]     110299672 (Col4a2) Exosome [BR:mcal04147]  Exosomal proteins   Exosomal proteins of other cancer cells    110299672 (Col4a2) Glycosaminoglycan binding proteins [BR:mcal00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    110299672 (Col4a2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  110299672 NCBI-ProteinID:  XP_021025074 Ensembl:  MGP_CAROLIEiJ_G0030815 UniProt:  A0A6P5Q5J0 LinkDB All DBs Position 8:7757616..7895565 Genome browser AA seq 1707 aa AA seqDB search MDRVRFKASGPPLRGWLLLATVTVGLMAQSVLGGVKKLDVPCGGRDCSGGCQCYPEKGAR GQPGAVGPQGYSGPPGLQGFPGLQGRKGDKGERGVPGPTGPKGDVGARGVSGFPGADGIP GHPGQGGPRGRPGYDGCNGTRGDAGPQGPSGSGGFPGLPGPQGPKGQKGEPYALSKEDRD KYRGEPGEPGLVGYQGPPGRPGPIGQMGPMGAPGRPGPPGPPGPKGQPGNRGLGFYGQKG EKGDIGQPGPNGIPSDITLVGPTTSTIHPDLYKGEKGDEGEQGIPGVISKGEEGIMGFPG IRGFPGLDGEKGVLGQKGSRGLDGFQGPSGPRGPKGERGEQGPPGPSVYSPHPSLAKGAR GDPGFQGAHGEPGSRGEPGEPGTAGPPGPSIGDEDSMRGLPGEMGPKGFSGEPGPPARYP GPPGADGRPGPQGVPGPAGPPGPDGFLFGLKGSEGRVGYPGPSGFPGTRGQKGWKGEAGD CQCGQVIGGLPGLPGPKGFPGVNGELGKKGDQGDPGLHGIPGFPGFKGAPGIAGAPGPKG IKGDSRTVTTKGERGQPGIPGVHGMKGDDGVPGRDGLDGFPGLPGPPGDGIKGPPGDAGL PGVPGTKGFPGDVGPPGQGLPGPKGERGFPGDAGLPGPPGFPGPPGPPGTPGQRDCDTGV KRPIGGGQQVIVQPGCIEGPTGSPGQPGPPGPTGAKGIRGMPGFPGASGEQGLKGFPGDP GREGFPGPPGFMGPRGSKGTTGLPGPDGPPGPIGLPGPAGPPGDRGIPGEVLGAQPGTRG DAGLPGQPGLKGLPGETGAPGFRGSQGMPGMPGLKGQPGFPGPSGQPGQSGPPGQHGFPG TPGREGPLGQPGSPGLGGLPGDRGEPGDPGVPGPVGMKGLSGDRGDAGMSGERGHPGSPG FKGMAGMPGIPGQKGDRGSPGMDGFQGMLGLKGRPGFPGTKGEAGFFGVPGLKGLPGEPG VKGNRGDRGPPGPPPLILPGMKDIKGEKGDEGPMGLKGYLGLKGIQGMPGVPGVSGFPGL PGRPGFIKGVKGDIGVPGTPGLPGFPGVSGPPGITGFPGFTGSRGEKGTPGVAGVFGETG PTGDFGDIGDTVDLPGSPGLKGERGITGIPGLKGFFGEKGAEGDIGFPGITGMAGAQGSP GLKGQTGFPGLTGLQGPQGEPGRVGIPGDKGDFGWPGVPGLPGFPGIRGISGLHGLPGTK GFPGSPGVDANGDPGYPGPTGDRGDRGEANTLPGPVGVPGQKGERGTPGERGPAGSPGLQ GFPGISPPSNISGSPGDVGAPGIFGLQGYQGPPGPPGPNALPGIKGDEGSSGAAGFPGEK GWVGDPGPQGQPGVLGLPGEKGPKGEQGFMGNTGPSGAVGDRGPKGPKGDQGFPGAPGSM GSPGIPGIPQKIAAQPGTLGPQGRRGLPGALGEIGPQGPPGDPGFRGAPGKAGPQGRGGV SAVPGFRGDQGPMGHQGPVGQEGEPGRPGSPGLPGMPGRSVSIGYLLVKHSQTDQEPMCP VGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASRNDKSY WLSTTAPLPMMPVAEEEIKPYISRCSVCEAPAVAIAVHSQDTSIPHCPAGWRSLWIGYSF LMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYFANKYSFWLTTIPEQNFQ STPSADTLKAGLIRTHISRCQVCMKNL NT seq 5124 nt NT seq  +upstreamnt  +downstreamnt atggaccgagtgcggttcaaagcgtctggccctcccctgcgagggtggctgctgctagcg actgtgacagtgggactcatggctcagagcgtcttggggggtgtgaagaagttggatgtg ccctgcggagggagagactgcagtgggggttgccagtgctacccggagaaaggagcaagg ggtcagccaggggcagtgggcccccaggggtacagtggccccccagggttgcaaggattc ccaggactacagggccgcaaaggagacaagggcgaacggggagttcctggaccaactgga ccaaaaggagatgtgggagcgagaggcgtctctggattccccggtgcagatggaattcct gggcatccagggcaaggtggaccccgaggaaggccaggctacgatggttgcaacggaacc aggggagacgcaggtccacaggggccctctggatctgggggcttccctggcctccctggg ccccaaggacccaaggggcagaaaggcgagccttacgcactctctaaagaagaccgtgac aaataccggggtgaacctggagagcctggcctggttggctaccagggacctcctggccgc ccagggcccataggacagatgggtcccatgggagcacctggaagaccgggaccaccggga ccccctggaccaaagggacaaccaggcaaccgagggctcggtttttacggacagaagggt gaaaagggtgacataggacagccaggacccaacgggatcccatctgacatcacacttgtt gggcccacaacatcaacgatccacccggatctgtacaagggtgaaaaaggagatgaagga gagcaagggatacccggcgtaatctcaaaaggcgaggaaggcatcatggggttcccagga atacggggttttcctggccttgatggagaaaaaggagtcttaggacagaaaggaagcaga ggcctggatggtttccaaggccccagtggacctcgaggacccaagggagaacggggggaa caaggacccccaggaccctctgtctactcgccccatccatccctggcaaaaggtgcccga ggtgacccaggattccaaggtgctcatggggagccagggagccgaggtgaaccaggagag cctggaaccgcgggtcctccaggcccatccatcggagatgaagattcaatgagaggcctt ccaggggagatgggacccaaaggcttctcaggagaaccagggccccctgcacgctatcct ggcccaccaggagcagatggaagaccaggtccccaaggagtccctggacctgcaggccca cctggaccagatggcttcctgtttggcctgaaaggatcagaagggagagtgggctatccg ggaccttcaggtttcccaggaacacgagggcagaaaggatggaaaggtgaagctggagac tgccaatgtggccaggtcatcgggggtcttccgggactgccaggacccaaaggttttccc ggtgtcaatggggagctcggaaagaaaggcgaccaaggagacccaggcctgcacggtatc cctgggttcccaggattcaagggggccccgggcattgctggagctcctggacccaaagga ataaagggagactctagaacagtcaccaccaaaggtgagcgaggacagccaggtatccct ggtgtacatggaatgaaaggtgatgatggcgtcccaggacgtgatgggctggatggattc cctggtctgcctggtcccccgggtgatggcatcaaaggccctccaggggatgcaggtctc cctggtgtacctggaaccaagggctttccaggagacgtcggtcctccaggacagggctta ccaggcccgaaaggcgagcgtggtttccctggagacgctgggttgcctggacctccgggc ttccctggtcctccaggtcccccaggaaccccaggacagagagattgtgacacgggtgtg aaaagacctatcggaggcggccagcaagtgatcgttcagccaggttgcattgaaggcccc acaggatcacctggccagccaggacccccaggccccacaggtgccaaaggcatcagagga atgccaggattcccaggagcctctggagaacaagggctcaagggctttcccggagaccca ggtcgagaaggcttcccagggcccccagggttcatgggaccccgaggatccaaaggtacc acgggcctccctggcccagatggacccccaggccccattggacttccaggaccagctgga ccccctggggacagagggattccaggagaagtgctaggggcccagcctgggacccgagga gatgctggacttccaggacagcctgggctgaaagggctcccaggagaaacaggagcaccg ggattcagaggaagccaagggatgcctgggatgccagggcttaaaggtcagccaggcttc ccaggaccttcgggacagccaggacagtctgggcccccaggacaacatggattcccagga actcctggccgagaggggcctttgggacagccaggctcccctggccttggaggtttgcct ggagacaggggtgagcctggtgaccctggtgtccctggccctgtgggcatgaaaggtctg tctggggacagaggtgacgccggtatgtcaggcgagcgtggtcatcctggaagccctgga tttaaaggaatggcagggatgcctggtatccctgggcaaaaaggtgatcgagggtcgcct ggaatggatggtttccagggcatgttgggacttaagggaagaccgggcttcccggggacc aaaggagaagctggattttttggagttcctggtttgaagggcctgcctggcgagccaggg gttaaaggaaaccgaggagaccggggccccccaggaccacctcctctcatcctgccgggg atgaaggacatcaagggagaaaagggagatgaaggaccaatgggcctgaaagggtacctg ggcttaaaaggcatccaaggaatgcccggggtccccggggtgtctggattccctgggcta cctggaaggcctggcttcatcaaaggagtcaagggagacatcggagtccctggcacacca ggcttgccgggatttcctggggtgtctggccctcctggaattaccgggttcccaggattc acaggcagccggggcgagaagggtactccaggagtagcaggagtctttggcgagaccggc cctactggggactttggggacattggggacactgtggacttaccaggaagcccaggcctg aagggggaacggggcatcacgggaattccaggtctcaagggattctttggagagaaagga gctgagggtgacattggatttcctgggataacgggcatggctggagctcagggctctcct ggacttaaaggacagacaggctttccagggctcacagggctgcaagggccacagggagag cctggacgggtcggaataccgggtgacaagggtgatttcggctggccaggcgtaccaggt ctaccaggttttcctgggatccgggggatcagcggattgcacggcctgccaggcaccaag ggcttccctggatccccaggtgttgatgctaatggagacccagggtacccaggccccacc ggagacaggggtgaccggggagaggccaacacacttccaggccccgtgggagttccaggg cagaaaggggagcggggaaccccaggggagcgtggcccagctgggagcccaggacttcag ggtttccccggtatctctccaccatccaacatctctgggtcacctggtgatgtaggcgca ccaggaatatttggcttgcaaggctaccaaggccctccaggaccacctgggccaaatgca cttcctggaatcaaaggagatgaggggagctctggagccgcaggattccctggagagaaa ggatgggttggggacccagggccccagggccagcctggtgtactcggtcttccgggggag aaagggcccaagggtgaacaaggattcatgggcaacaccgggccctctggggccgtgggt gacagaggccccaaaggacccaaaggcgaccaaggattcccaggtgctcctggctctatg ggatccccaggaattcctggcatcccccagaagattgctgcccagcctgggacgctgggt ccccagggcaggagaggccttcctggtgccctgggagagatagggcctcagggccctcct ggagatccaggtttccgtggggccccaggcaaggctgggcctcagggcagaggtggcgtg tctgctgttccagggttccggggagaccaagggcccatgggacaccagggtccagttggc caggaaggggaaccaggccgtccagggagcccaggcctgccagggatgccaggccgcagt gtgagcatcggctacctcctggtgaagcacagccaaacggaccaggagcccatgtgcccc gtgggcatgaacaagctctggagtgggtacagcctgctgtatttcgagggccaggagaaa gcgcacaaccaggacctaggactggcaggctcctgcctggcccgcttcagcaccatgcct ttcctgtactgcaatccgggtgacgtctgctactatgccagccgcaacgacaagtcctac tggctctccaccacggcccctctacccatgatgcccgtggctgaggaggaaatcaagccc tacatcagccgctgctctgtgtgcgaggctccggccgtggccattgccgtgcacagccag gatacctctataccccactgcccagctgggtggcggagtttgtggatcggatattcattc ctcatgcacactgcagccggggatgaaggcggtggccagtcactggtgtcaccgggcagc tgtctggaggacttccgtgcaacgccatttatcgagtgtaacgggggccgtggtacctgc cactacttcgctaacaagtacagcttctggctgaccacaatcccggaacagaacttccag agcacaccatccgctgacacgctcaaggccggcctcatccgcacgcacatcagccgctgc caagtgtgcatgaagaatctgtga

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