Mus caroli (Ryukyu mouse): 110299827
Help
Entry
110299827 CDS
T05910
Name
(RefSeq) ATP-dependent RNA helicase DDX19B isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03013
Nucleocytoplasmic transport
mcal03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110299827
03015 mRNA surveillance pathway
110299827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110299827
Enzymes [BR:
mcal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110299827
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110299827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110299827
NCBI-ProteinID:
XP_021025371
Ensembl:
MGP_CAROLIEiJ_G0031568
UniProt:
A0A6P5Q110
LinkDB
All DBs
Position
8:complement(102097718..102123941)
Genome browser
AA seq
496 aa
AA seq
DB search
MLRSDGRSCWPGRGRARARAQAQAQAWNPLSLPLTGLSNLHLKEEKIKPDANGAVVKTNA
NTEKTEEDEKEDRAAQSLLNKLIRSNLVDNTNQVEVLQRDPSSPLYSVKSFEELRLKPQL
LQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAVLSQVEPANKFA
QCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKVSEQIVIGTPGTVLD
WCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWK
FAQKVVPDPNIIKLKREEETLDTIKQYYVLCSNREEKFQALCNLYGAITIAQAMIFCHTR
KTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVS
VVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKI
ERLDTDDLDEIEKIAN
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcagcgatggccggagctgctggccgggtcgaggtcgagcccgagcccgagcc
caagcacaagcccaagcgtggaatccactttccctgcccctgactggtttgagcaacttg
catcttaaggaggagaaaatcaaaccagatgccaatggtgctgttgttaagaccaatgca
aacacagagaagacagaggaagatgagaaagaggacagagctgctcagtctttactcaac
aagctgatcagaagcaatcttgtggataacaccaaccaagtggaagtcctgcagagggac
ccaagctccccgctctactcagtgaagtcctttgaagagcttcgcctgaaaccccagctt
ctccagggagtctatgctatgggtttcaaccgcccttccaaaatacaggaaaatgcattg
cctttgatgcttgctgaacccccacagaacttaattgcccagtctcagtctggtacaggt
aaaacagctgcctttgttttggctgtgctcagccaagtagagcctgcaaacaagtttgcc
cagtgtctctgcctctctccaacctatgagcttgctcttcaaacaggaaaagtgattgag
cagatgggcaagttttaccctgaactgaagctagcttatgctgttcgaggcaacaaattg
gagagaggtcagaaggtgagtgagcagattgtcattggcacccccgggaccgtcctggac
tggtgctccaagctgaagttcattgaccccaagaagatcaaggtgtttgttctggacgag
gctgatgtgatgatagcgactcagggccaccaagaccagagcatccgcatccagaggatg
ctgcccagaaactgccagatgctgcttttctcggccacctttgaagactcggtgtggaag
tttgcccagaaggtggtcccagaccccaacatcatcaagctgaagcgcgaggaggagact
ctggacaccatcaaacagtactacgtgctctgcagtaacagagaggagaagttccaggcc
ctgtgcaacctgtatggggccatcaccatcgcccaagccatgatcttctgccatacccgc
aaaacagctagctggctggcagcagagctctcaaaagagggccaccaggtggccctgctg
agtggagagatgatggtggagcagagggctgccgtgatcgaacgcttccgagaaggcaaa
gagaaggttctggtgaccaccaacgtgtgtgcccgtggtatcgatgttgaacaggtgtct
gtggtcatcaattttgacctccctgtggacaaggatgggaacccagacaatgagacctac
ttgcaccgcattgggcgcactggccgctttggcaagaggggtctggcagtgaacatggtg
gacagcaagcacagcatgaatatcctcaacaggatccaggagcattttaataagaagata
gaaagattggacacagatgatttggatgagattgagaaaatagccaactga
DBGET
integrated database retrieval system
