Mus caroli (Ryukyu mouse): 110299860
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Entry
110299860 CDS
T05910
Symbol
Slamf1
Name
(RefSeq) signaling lymphocytic activation molecule isoform X1
KO
K06536
signaling lymphocytic activation molecule family member 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
mcal04517
IgSF CAM signaling
mcal05162
Measles
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
110299860 (Slamf1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110299860 (Slamf1)
09160 Human Diseases
09172 Infectious disease: viral
05162 Measles
110299860 (Slamf1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcal04515
]
110299860 (Slamf1)
04090 CD molecules [BR:
mcal04090
]
110299860 (Slamf1)
Cell adhesion molecules [BR:
mcal04515
]
Immunoglobulin superfamily
SLAM/CD2 family
110299860 (Slamf1)
CD molecules [BR:
mcal04090
]
Proteins
110299860 (Slamf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLAM
Ig_3
ig
Ig_2
I-set
Receptor_2B4
DUF5737
Motif
Other DBs
NCBI-GeneID:
110299860
NCBI-ProteinID:
XP_021025431
Ensembl:
MGP_CAROLIEiJ_G0014879
UniProt:
A0A6P5Q6V6
LinkDB
All DBs
Position
1:162058883..162092905
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AA seq
343 aa
AA seq
DB search
MDPKGSLSWRILLFLSLAFELSYGTGGGVMDCPVILQKLGQDTWLSLTNEHQIDKSVNKS
VRILVTMATSPGSKSNKKIVSFDLSKGSYPDHLEDGYHFQSKNLSLKILGNRRESEGWYL
VSVEENVSVQQFCKQLKLYEQVSTPEIKVLNKTQENENGTCSLLLACTVKKGDHVTYSWS
DEAGTHLLSRANRSHLLHITLGNQHQDSIYICTASNPVSSRSRIFNLSSQACKQESSSES
SPLIQYTLVPLGVVIIFILVFTAIIMMKRQGKPNPCQPPVEEKSLTIYAQVQKSGFQEKK
LHDALTDQDPCTTIYVAATEPAPESVKEPNPTTVYASVTLPES
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaaaggatccctttcctggagaatacttctgtttctctccctggcttttgag
ttgagctatggaacaggtggaggtgtgatggattgcccagtgattctccagaagctggga
caggacacgtggctgtccctgacaaatgaacatcagatagataagagcgtgaacaaaagt
gtccgcatcctcgtcaccatggcaacgtccccaggaagcaaatccaacaagaaaattgtg
tcttttgatctctctaaagggagctatccagatcacctggaggatggctaccactttcaa
tcgaaaaacctgagcctgaagatcctcgggaacaggcgggagagtgaaggatggtacttg
gtgagcgtggaggagaacgtgtctgttcagcaattctgcaagcagctgaagctttatgag
caggtctccactccagagattaaagtgctaaacaaaacccaggagaacgagaatgggacc
tgcagcttgctgttggcctgcacagtgaagaaaggggatcatgtgacttacagctggagt
gatgaggcaggcacccacctgctgagccgagccaaccgctcccacctcctgcacatcact
cttggcaaccagcatcaagacagcatctacatctgcaccgcaagcaaccctgtcagcagt
cgctctaggatcttcaacctgtcatcgcaagcatgcaagcaggaatcctcctcagaatcg
agtccattgatacaatatactcttgtaccactgggggtcgttataatcttcatcctggtt
ttcacggcaataataatgatgaaaagacaaggtaaaccaaatccctgccagccaccagtg
gaagaaaaaagccttacgatttatgcccaagtacagaaatcagggtttcaagagaagaaa
cttcatgatgccctaacagatcaggacccctgcacaaccatttatgtggctgccacagag
cctgccccagagtctgtcaaggaaccaaaccccaccacagtttatgccagtgtgacactg
ccagagagctga
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