Mus caroli (Ryukyu mouse): 110299919
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Entry
110299919 CDS
T05910
Symbol
Lsm1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110299919 (Lsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110299919 (Lsm1)
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110299919 (Lsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
110299919 (Lsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
110299919
NCBI-ProteinID:
XP_021025540
Ensembl:
MGP_CAROLIEiJ_G0030930
UniProt:
A0A6P5Q732
LinkDB
All DBs
Position
8:20255044..20272343
Genome browser
AA seq
133 aa
AA seq
DB search
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVQQQTRLEAEKLKVQTLKDR
GLSIPRADTLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactatatgcccggcaccgccagcctcatcgaggacatcgacaaaaagcacttggtc
ctacttcgagatggaaggacacttataggttttttaagaagcattgatcaatttgctaac
ttagtgctccatcagactgtggaacgaattcatgtgggcaaaaagtatggtgatattcct
cgagggattttcgtggtcagaggagaaaatgtggtcctactaggagaaatagacctggag
aaggagagtgacacgccccttcagcaagtgtctattgaagagatcctagaagaacagagg
gtgcaacagcagaccagactggaggcagagaagctgaaggtccagacccttaaagatcgg
ggcctttccattcctcgcgcagacactctggacgagtactga
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integrated database retrieval system
