Mus caroli (Ryukyu mouse): 110299927
Help
Entry
110299927 CDS
T05910
Symbol
Siah1
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04115
p53 signaling pathway
mcal04120
Ubiquitin mediated proteolysis
mcal04137
Mitophagy - animal
mcal04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110299927 (Siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
110299927 (Siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
110299927 (Siah1)
09143 Cell growth and death
04115 p53 signaling pathway
110299927 (Siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110299927 (Siah1)
Enzymes [BR:
mcal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110299927 (Siah1)
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
110299927 (Siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
110299927
NCBI-ProteinID:
XP_021025552
Ensembl:
MGP_CAROLIEiJ_G0031347
UniProt:
A0A6P5Q1D1
LinkDB
All DBs
Position
8:complement(78280080..78305904)
Genome browser
AA seq
347 aa
AA seq
DB search
MEASSLLCLGAQSPGGASAGWPWGLQEPEASILMTWKPAHFLHSWKGVLLTCLPTVGTRT
RKRKEMSRQTATALPTGTSKCPPSQRVPALTGTTASNNDLASLFECPVCFDYVLPPILQC
QSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEITLPHTEKA
EHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGA
VDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLT
WEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgagcagccttctgtgcttaggagcccagagcccaggaggggcttctgcaggc
tggccttgggggttgcaggaacctgaagcctccattctcatgacctggaagcctgcacac
tttctgcattcctggaagggagtcctgctcacatgcttgccaacggttgggaccaggacc
aggaagaggaaagagatgagccgtcagactgctacagcattacccactggcacctcaaag
tgtccaccatcccagagggtacctgccttgaccggcacaactgcatccaacaatgacttg
gcgagtctttttgagtgtcctgtctgctttgactatgtgttgccacctattcttcagtgt
cagagtggccatcttgtttgtagcaactgtcgccccaaacttacatgttgtcccacctgc
cggggcccattgggatccattcgcaacttggctatggagaaagtggccaactcagtactc
ttcccttgtaaatatgcctcttctggatgtgaaataactctgccacacaccgaaaaggca
gagcacgaggagctctgtgagttcaggccttactcctgcccctgccccggtgcttcctgt
aagtggcaaggctccttggatgccgtcatgccccacctgatgcatcagcacaagtccatt
accaccctgcaaggagaagacatagttttccttgctacagacattaaccttcctggtgct
gttgactgggtgatgatgcagtcttgttttggctttcatttcatgttagtcttggagaaa
caagaaaaatatgatggtcatcagcagttctttgcaattgtacaactgataggaacacgc
aagcaagctgaaaattttgcatatcgacttgagctaaatggtcataggcggcgattgact
tgggaagcgactcctcgatctattcatgagggaattgcaacagccattatgaatagtgac
tgcctagtgtttgacaccagcattgcacagctttttgcagaaaatggcaatttaggcatc
aatgtaactatttccatgtgttga
DBGET
integrated database retrieval system
