Mus caroli (Ryukyu mouse): 110299933
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Entry
110299933 CDS
T05910
Symbol
Colgalt1
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal00310
Lysine degradation
mcal00514
Other types of O-glycan biosynthesis
mcal01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
110299933 (Colgalt1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
110299933 (Colgalt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
mcal01003
]
110299933 (Colgalt1)
Enzymes [BR:
mcal01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
110299933 (Colgalt1)
Glycosyltransferases [BR:
mcal01003
]
O-Glycan biosynthesis
O-linked Gal type
110299933 (Colgalt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
110299933
NCBI-ProteinID:
XP_021025561
Ensembl:
MGP_CAROLIEiJ_G0031197
UniProt:
A0A6P5Q943
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Position
8:63720975..63734989
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AA seq
617 aa
AA seq
DB search
MAALPRGSRGLSLLPLLLLLPPLGGPRGADGYFPEERWSPESPLQAPRVLIALLARNAAP
ALPATLGALEQLRHPRERTALWVATDHNTDNTSAILREWLVAVKGLYHSVEWRPAEEPSS
YPDEEGPKHWSDSRYEHVMKLRQAALKSARDMWADYILFMDIDNLITNPDTLSLLIAENK
TVVAPMLDSRAAYSNFWCGMTSQGYYKRTPAYIPIRKRDRRGCFAVPMVHSTFLIDLRKA
ASRNLAFYPPHPDYTWSFDDIIVFAFSCKQAEVQMYVCNKEVYGFLPVPLRAHSSLQDEA
ESFMHVQLEVMVKHPPVQLSRFISAPRKTSDKMGFDEVFMINLKRRRDRRERMLRALHEQ
EIDCQLVEAVDGKAMNTSQVEAMGIQMLPGYRDPYHGRPLTKGELGCFLSHYNIWKEVVD
RGLQKSLVFEDDLRFEIFFKRRLMNLMRDVEREGLDWDLIYVGRKRMQVEHPEKAVPHVR
NLVEADYSYWTLAYVISLQGAQKLLAAKPLAKMLPVDEFLPVMFDKHPMSEYKSHFSPRN
LRAFSVEPLLIYPTHYTGDDGYVSDTETSVVWNNEQVKTDWDRAKSQKMREQQALSREAK
NSDVLQSPLDSAARDEL
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttgccacgcgggtcacgcgggctgtcgctgctgccgttgctccttctgctg
ccgccgctgggcggcccgcgcggcgcggacggctactttccagaggagcgctggagtccc
gagtccccgctacaggcgccgcgcgtgctcatcgcgctgctggcgcggaacgcggcaccc
gcgctgcccgccacgctgggcgccctggagcagctgcgccacccacgggagcgcacggcg
ctgtgggtggccacagatcacaacactgacaacacttcagccatacttcgagagtggctg
gtggcagtgaagggtttataccactctgtggagtggcgaccggcagaggaacccagctcc
tacccagacgaagagggccccaaacactggtctgattcccgctacgagcatgtcatgaaa
ctgcgccaagcagccttgaagtcagctagggacatgtgggctgactacattctgttcatg
gacatcgacaacttgatcaccaaccccgacactctgagcctgctcatcgctgagaacaag
acagtggtggcccccatgctggactcccgagcagcatactccaacttctggtgtgggatg
acttcgcagggctactacaagcgcacccctgcctatatccccatccgaaaacgagaccgc
aggggctgctttgcagttcccatggtgcactctaccttcctcattgacctgcgtaaggct
gcatccaggaacctggccttttacccaccacacccagactacacctggtcttttgacgac
atcatcgtctttgccttctcctgtaaacaggcagaggtgcaaatgtacgtgtgcaataag
gaggtgtacggcttcctgcccgtgccactgcgcgcgcacagcagcctgcaggacgaagca
gagagcttcatgcatgtgcagctggaggtcatggtgaagcatccaccagtgcagctctcc
cgattcatctcagcacccaggaagacttctgacaagatgggctttgatgaggtcttcatg
atcaacctgaagcggaggcgggaccggcgagaacgcatgctgcgggcactgcatgagcag
gagattgactgccagctggtggaggctgtagatggcaaagccatgaacaccagccaggtg
gaagccatgggcatccagatgctgcctggctaccgggacccctaccatgggcggccactc
accaagggagagctgggctgctttctcagccactacaacatctggaaggaggtggttgac
cggggactacagaaatcactagtgtttgaggatgatctgcgttttgagatcttcttcaag
agacgtctgatgaacctcatgcgggatgtggagcgtgaggggctggactgggacctcatc
tacgtgggccggaagcgcatgcaggtggagcaccctgaaaaggctgtgccccacgtaagg
aacctggtagaggctgattactcctactggacgctagcctatgtaatctccctgcaaggt
gctcagaagttgcttgctgccaagccactcgccaaaatgctacctgttgatgagtttctg
cctgtgatgtttgacaagcacccaatgtcagaatacaagagtcacttctctccccgcaac
ctgcgtgccttctctgtggagcccctccttatctaccctacacactacacaggggatgat
ggctatgtgagtgacacagagacctcagttgtgtggaataatgagcaggttaagactgac
tgggaccgagccaagtcccagaagatgcgggaacagcaagcactgagccgtgaggccaag
aactcagatgtgctccagtctccactggacagcgctgcccgtgatgagctttga
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