Mus caroli (Ryukyu mouse): 110299970
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Entry
110299970 CDS
T05910
Name
(RefSeq) ATP-dependent RNA helicase DDX19A isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03013
Nucleocytoplasmic transport
mcal03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110299970
03015 mRNA surveillance pathway
110299970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110299970
Enzymes [BR:
mcal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110299970
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110299970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110299970
NCBI-ProteinID:
XP_021025612
Ensembl:
MGP_CAROLIEiJ_G0031567
UniProt:
A0A6P5Q1G7
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All DBs
Position
8:complement(102068656..102089973)
Genome browser
AA seq
478 aa
AA seq
DB search
MATDSWALAVDEQEAAVKSMSSLQIKEEKVKADTNGVIKTSTTAEKTEEEEKEDRAAQSL
LNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQEN
ALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPADRYPQCLCLSPTYELALQTGKV
IEQMGKFHPELKLAYAVRGNKLERGQKVSEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVL
DEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREE
ETLDTIKQYYVLCSNREEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVA
LLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNE
TYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcctgggcgctggcggtggacgagcaggaagccgctgtcaagtcgatg
agcagtttgcagatcaaggaagagaaagtcaaagcagacaccaatggtgttatcaaaacc
agcaccactgcagaaaagacagaggaagaggagaaagaggacagagctgctcagtcttta
ctcaacaagctgatcagaagcaatcttgtggataacaccaaccaagtagaagtcctgcag
agggacccaaactccccgctctactcagtgaagtccttcgaagagcttcgcctgaaacca
cagcttctccaaggagtctacgccatgggcttcaatcgaccatccaagatccaggagaat
gctctgcccatgatgcttgctgaacccccacagaacctgattgcacagtcccagtctggt
actgggaaaacagctgcctttgtcctagctatgctcagcagagtggaaccagcggacaga
tatcctcagtgtttgtgcctgtccccaacatatgagctggcattacaaacaggaaaagtg
attgagcagatgggcaagtttcacccagaattgaagctagcttatgctgttcgaggcaat
aaattggagagaggtcagaaggtgagtgagcagattgtcattggcacccccgggaccgtc
ctggactggtgctccaagctgaagttcattgaccccaagaagatcaaggtgtttgttctg
gacgaggctgatgtgatgatagcgactcagggccaccaagaccagagcatccgcatccag
aggatgctgcccagaaactgccagatgctgcttttctcggccacctttgaagactcggtg
tggaagtttgcccagaaggtggtcccagaccccaacatcatcaagctgaagcgcgaggag
gagactctggacaccatcaaacagtactacgtgctctgcagtaacagagaggagaagttc
caggccctgtgcaacctgtatggggccatcaccatcgcccaagccatgatcttctgccat
acccgcaaaacagctagctggctggcagcagagctctcaaaagagggccaccaggtggcc
ctgctgagtggagagatgatggtggagcagagggctgccgtgatcgagcgcttccgagaa
ggcaaagagaaggttctggtgaccaccaacgtgtgtgcccgtggtatcgatgttgaacag
gtgtctgtggtcatcaattttgacctccctgtggacaaggatgggaacccagacaatgag
acctacttgcaccgcattgggcgcactggccgctttggcaagaggggtctggcagtgaac
atggtggacagcaagcacagcatgaatatcctcaacaggatccaggagcattttaataag
aagatagaaagattggacacagatgatttggatgagattgagaaaatagccaactga
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