Mus caroli (Ryukyu mouse): 110300067 Help Entry 110300067         CDS       T05910                                  Symbol Xab2 Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism mcal  Mus caroli (Ryukyu mouse) Pathway mcal03040   Spliceosome Brite KEGG Orthology (KO) [BR:mcal00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     110300067 (Xab2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:mcal03019]     110300067 (Xab2)    03041 Spliceosome [BR:mcal03041]     110300067 (Xab2) Messenger RNA biogenesis [BR:mcal03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      110300067 (Xab2) Spliceosome [BR:mcal03041]  Complex B   Other components    Prp19-related factors     110300067 (Xab2)  Complex C     110300067 (Xab2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_PRP39_N TPR_14 TPR_2 TPR_8 TPR_12 TPR_19 Suf TPR_15 ARM_TT21 TPR_MalT ARM_TT21_C TPR_16 TPR_1 TPR_7 RPN7 TPR_NPHP3 TPR_21 Motif Other DBs NCBI-GeneID:  110300067 NCBI-ProteinID:  XP_021025772 Ensembl:  MGP_CAROLIEiJ_G0030775 UniProt:  A0A6P5Q1V0 LinkDB All DBs Position 8:complement(476137..487768) Genome browser AA seq 810 aa AA seqDB search MVVMARVPRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSYPLPETAVRGYRRFLKLSPESA EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVQDFTQVFDSYA QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHXVHEW HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEK ATKVNFKQVDDLASVWCQCGELELRHENYDEALKLLRKATALPARRAEYFDGSEPVQNRV YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA YERGISLFKWPNVSDIWSTYLTKFISRYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA QLEEEWGLARHAMAVYDRATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQTTGAFWQ TWKDFEVRHGNEDTIREMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSG MDDMKLLEQRAEQLAAEAERDQPPRAQSKIFFVRSDASREELAELAQQANPEEIQLGEDE DEDEMDLEPNEVRLEQQSVPAAVFGSLKED NT seq 2433 nt NT seq  +upstreamnt  +downstreamnt atggtggtgatggcgcgagttccgcgtcccgagcggccggaccttgtttttgaggaagag gaccttccctatgaggaagaaatcatgaggaaccagttctccgtcaaatgctggctccgc tacatcgagttcaagcagggggcccccaagccccgactcaaccagttgtatgagcgggca ctcaaactgcttccctgcagctacaaactctggtaccgctatctgaaggcacgccgggca caggtgaaacatcgctgtgtgactgaccctgcctatgaagatgtcaacaactgccatgag agggcctttgtgttcatgcacaagatgccacgcctgtggttagactactgccagtttctc atggaccagggaagggtaacacatacccgccgcacctttgaccgtgccctcagggcactg cccatcacacaacactctcgcatctggcccctgtatctgcgtttcctgcgctcctaccca ctgcctgagactgctgtgcgaggctaccgtcgcttcctcaagctgagtcctgagagcgct gaggaatacatcgagtatctcaaatccagtgaccggctagacgaggctgcacagcgcctg gccaccgtggtgaatgatgagcgctttgtatccaaggctggtaaatccaactaccagctg tggcacgagctgtgtgaccttatctcccagaatccagacaaggtacagtctctcaatgtg gatgccataatccgtggtgggctcacccgtttcactgaccagctgggcaagctgtggtgc tctctggcagactactatatccgcagtggccacttcgaaaaggctcgggatgtgtatgag gaggccattcgcacggtgatgaccgtgcaggacttcacccaggtgttcgacagctacgcc cagtttgaggagagcatgattgcagcgaagatggagactgcctctgaactggggcgtgag gaggaggacgatgtggacctagagctgcgcctggcccgcttcgaacagctcatcagccga cggcccctgcttctcaatagcgtccttctgcgccagaacccacaccangtccacgagtgg cacaagcgtgtagccctccatcagggccgccctcgggagattatcaacacatacacagag gctgtgcaaacagtagaccccttcaaagccacaggcaagccccacacactgtgggttgca ttcgccaagttttacgaagacaatggacagctggatgatgctcgtgtcatcctagagaag gccaccaaggtgaacttcaagcaggtggatgacctggcaagtgtgtggtgccagtgtggg gagctggagctcaggcacgagaattacgacgaggccttaaagctgcttcggaaagccacg gctttgcctgcccgccgagctgaatactttgatggttcagaacctgtgcagaaccgtgta tataagtcactgaaggtgtggtccatgcttgcngacttggaggaaagcctgggcactttc cagtcaaccaaggccgtgtatgaccgaatcctggacctgcgcatagccacaccacagatc gttattaactatgccatgttcctggaggagcacaagtactttgaggagagcttcaaggct tatgagcgtggcatctcactgttcaagtggcccaatgtttcagacatctggagcacctac ctgaccaaattcatctcgcgctatgggggccgaaagctggagcgtgcacgggatctcttt gagcaggcactcgatggctgcccaccaaaatatgccaagactttatacctgctctacgca cagctggaggaggaatggggccttgcccgccatgccatggctgtgtatgaccgtgcgacc agggcagtggagccagcacagcagtacgacatgtttaacatctacatcaagcgggctgct gagatctatggcgtcacccacactcgtggcatctaccagacaactggggcattctggcaa acatggaaggactttgaggtccggcacggcaatgaggataccatcagggagatgctgagg atacggcggagtgtgcaggccacatacaatactcaggtcaacttcatggcttcacagatg ctcaaggtgtcnggcagtgccacaggcaccgtgtctgacctggctcctgggcagagcggc atggatgacatgaagttgctggaacagagagcagaacagctggcagctgaggcagagcgg gaccagccacccagggcccagagcaagatcttctttgtgaggagtgatgcatccagggag gaattggcagagctggctcagcaggccaaccctgaggagatccagctgggcgaggatgag gacgaggacgagatggacctggagcccaatgaagtccgactggaacagcagagtgtacca gctgctgtgttcgggagcctaaaggaagactga

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