KEGG   Mus caroli (Ryukyu mouse): 110300100
Entry
110300100         CDS       T05910                                 
Symbol
Cul4a
Name
(RefSeq) cullin-4A isoform X1
  KO
K10609  cullin 4
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal03420  Nucleotide excision repair
mcal04120  Ubiquitin mediated proteolysis
mcal05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110300100 (Cul4a)
  09124 Replication and repair
   03420 Nucleotide excision repair
    110300100 (Cul4a)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    110300100 (Cul4a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mcal04121]
    110300100 (Cul4a)
   03400 DNA repair and recombination proteins [BR:mcal03400]
    110300100 (Cul4a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mcal04147]
    110300100 (Cul4a)
Ubiquitin system [BR:mcal04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     110300100 (Cul4a)
DNA repair and recombination proteins [BR:mcal03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      110300100 (Cul4a)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      110300100 (Cul4a)
Exosome [BR:mcal04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   110300100 (Cul4a)
SSDB
Motif
Pfam: Cullin SecA_SW Herpes_IE1 ADH_zinc_N
Other DBs
NCBI-GeneID: 110300100
NCBI-ProteinID: XP_029336346
UniProt: A0A6P7RGW4
LinkDB
Position
8:9560201..9591525
AA seq 468 aa
MADEGPRKGSVSALMGRTNGLTKPAALAGGPAKPGGTGGSRKLVIKNFRDRPRLPDNYTQ
DTWRKLHEAVKAIQSSTSIRYNLEELYQAVENLCSHKVSPTLYKQLRQVCEDHVQAQILP
FREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRN
HIISDRMVQSKTIDGILLLIGRERSGEAVDRSLLRSLLSMLSDLQVYKDSFELKFLEETN
CLYAAEGQRLMQDREVPEYLNHVSKRLEEEADRVITYLDHSTQKPLIACVEKQLLGEHLT
AILQKGLEHLLDENRVPDLTQMYQLFSRVKGGQHALLQHWSEYIKTFGTTIVINPEKDKD
MVQDLLDFKDKVDHVVEVCFQRNERFINLMKESFETFINKRPNKPAELIAKHVDSKLRAG
NKEATDEELERILDKIMILFRFIHGEEGGAVRPDXRAFRGXNGPRTRK
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggcggacgagggccctcggaagggcagcgtctcggctctcatgggccgcaccaacggc
ctcaccaagccggcggcgttggccggtggccccgccaagccggggggcacgggcggctcc
aggaagctggtcatcaagaacttccgagacaggccgcggctgcctgacaactacactcag
gacacgtggcggaagcttcacgaagcggtcaaggccatccagagcagcacatccatcagg
tacaacctggaggagctgtaccaggctgttgaaaatctttgttctcacaaagtctcccca
acgctgtacaagcagctgcgccaggtctgtgaagaccatgtccaggcccagatcctccca
ttcagagaagactcactagacagcgttttatttctaaagaagattaacacatgctggcaa
gatcactgcagacaaatgatcatgatcagaagcatcttcctgtttctggatcgcacctac
gtcctccagaattccatgctgccttctatctgggacatgggcctagagctgtttaggaac
cacatcatcagcgacaggatggtgcagagtaagaccattgatgggatcctgctgctgatt
gggcgtgaacgaagtggagaggctgtggacaggagcctgcttcggagtttgttaagcatg
ctctcagatctccaggtgtacaaagactcatttgagctgaagttcttggaagagactaac
tgtctatacgctgctgaaggccagaggctgatgcaggacagggaggttccagaatacctt
aaccatgtgagcaaacgtctagaagaggaagccgaccgagtgatcacctacttagaccac
agcacacaaaaaccgttgattgcctgtgtggagaagcagctgttaggagaacatttgaca
gcaattctgcagaaagggctggagcacttgctggatgagaacagggtgcccgacctcacc
cagatgtaccagctcttcagccgggtgaaaggagggcagcatgcgctgctacagcactgg
agcgagtacatcaagacctttgggacaaccattgtcatcaatcctgagaaagacaaagac
atggtccaagacctgctggactttaaggacaaagtggaccacgtggtggaggtgtgcttc
cagaggaacgagcgcttcatcaacttgatgaaggagtccttcgagacgttcatcaacaag
agaccaaacaagcctgcagagctcattgccaagcacgtggactcaaagttacgggcgggc
aacaaagaagccacagatgaggaactggagaggatcctggacaagatcatgattctcttc
cgtttcatccatggtgaggaaggaggggctgtgcggccagacnagcgtgcatttagaggg
naaaatggtccccgaactcggaagtag

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