Mus caroli (Ryukyu mouse): 110300229
Help
Entry
110300229 CDS
T05910
Symbol
Msr1
Name
(RefSeq) macrophage scavenger receptor types I and II isoform X1
KO
K06558
macrophage scavenger receptor 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110300229 (Msr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110300229 (Msr1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
mcal04090
]
110300229 (Msr1)
Membrane trafficking [BR:
mcal04131
]
Endocytosis
Phagocytosis
Scavenger receptors
110300229 (Msr1)
CD molecules [BR:
mcal04090
]
Proteins
110300229 (Msr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRCR
Macscav_rec
Collagen
SRCR_2
DUF7310
Motif
Other DBs
NCBI-GeneID:
110300229
NCBI-ProteinID:
XP_021025967
Ensembl:
MGP_CAROLIEiJ_G0030990
UniProt:
A0A6P5QEB4
LinkDB
All DBs
Position
8:complement(33572921..33635807)
Genome browser
AA seq
487 aa
AA seq
DB search
MLKYYVIKILGFNCKEREVDKSVLSSLPAMTKEMIENQRLCLHEPEDADCNSESVKFDAH
SMTTFLPHSTKNGPSLQEKLKSFKAALIALYLLVFAVLIPVVGIVTAQVLNWEMKNCLVC
SLNTSETSQGPMEKENTSKVEMRFTIIMEHMKDMEERIQSISNSKAHLIDTERFQNFSMA
NDQRLNDILLQLNSLISSVQEHGNSLDAISKSLQSLNMTLLDVQLHTETLNVRVRESTAK
QQEDISKLEERVYKVSAEVQSVKEEQAHVEQEVKQEVRLLNNITNDLRLKDWEHSQTLKN
ITLIQGPPGPRGEKGDRGLTGQTGPPGPPGIRGIPGDKGDSGPIGFPGGRGNPGAPGKAG
RPGSPGLKGQKGEKGSVGISTPLKTVRLVGGSGAHEGRVEIFHQGQWGTICDDRWDIRAG
QVVCRSLGYQGVLAVHKRAHFGQGTGPIWLNEVMCFGRESSIENCKISKWGVLSCSHSED
AGVTCTS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaatactatgtgataaagattttaggtttcaattgtaaagagagggaagtggat
aaatcagtgctgtcttctttaccagcaatgacaaaagagatgatagagaatcagaggctc
tgccttcatgaaccagaggatgctgactgcaattcagaatccgtgaaatttgacgcacat
tcaatgacaacattccttcctcacagcactaaaaatggcccctcccttcaggagaagttg
aagtccttcaaggctgccctcattgctctctacctccttgtgtttgcagtactaatacct
gttgttggaatagtgacagctcaggttttgaattgggaaatgaagaactgcttagtttgt
tcacttaacacaagtgagacatctcaaggtcctatggaaaaagaaaataccagtaaagtg
gaaatgagatttacaattatcatggaacacatgaaggacatggaggagagaatccaaagc
atttcaaactcaaaagcccaccttatagacacggaacgcttccagaatttcagcatggca
aatgaccaaagacttaatgatattcttctgcagttaaattccttgatttcgtcagtccag
gaacatgggaattcactggatgcaatctccaagtccttacagagtctgaatatgacactg
cttgatgttcagctccatacagaaacactgaatgtcagagtccgcgaatctacagcaaag
caacaggaggatatcagtaaattggaggaacgtgtgtacaaagtatcagcagaagtccag
tctgtgaaagaagaacaagcgcacgtggaacaggaagtaaaacaggaagtgagactattg
aacaacatcaccaacgacctcagactgaaggactgggaacactcacagacactgaaaaac
atcaccttaattcaagggcctcctggaccccgaggtgaaaagggagacagagggcttact
ggacaaactggcccacctggtcctccaggcataagaggtattccaggtgataaaggtgat
tcgggaccaattggcttccctggaggtcgaggaaacccaggagcaccaggaaaggcaggg
aggccaggatctcctggacttaaaggacaaaagggagaaaagggcagtgtaggcatatca
accccccttaagacagttcgactggttggtggtagtggagcccatgagggccgagtggag
atcttccaccaaggccagtggggcacaatctgtgatgatcgctgggatatacgggctgga
caagttgtctgccggagtctaggataccaaggtgttctagctgtgcacaagagagctcac
tttggacaaggtactggtccaatatggctgaatgaagtgatgtgttttggaagagaatca
tctattgaaaactgtaaaatcagcaagtggggagtattaagctgttcacattcagaagat
gctggggtcacttgtacttcataa
DBGET
integrated database retrieval system
