Mus caroli (Ryukyu mouse): 110300308
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Entry
110300308 CDS
T05910
Symbol
Cdh16
Name
(RefSeq) cadherin-16
KO
K06810
cadherin 16, KSP-cadherin
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcal04515
]
110300308 (Cdh16)
Cell adhesion molecules [BR:
mcal04515
]
Cadherins
Major cadherins
110300308 (Cdh16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
DUF6941
Motif
Other DBs
NCBI-GeneID:
110300308
NCBI-ProteinID:
XP_021026098
Ensembl:
MGP_CAROLIEiJ_G0031452
UniProt:
A0A6P5Q8H5
LinkDB
All DBs
Position
8:complement(95794152..95804606)
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AA seq
830 aa
AA seq
DB search
MISARPWLLYLSVIQAFTTEAQPAESLHTEVPENYGGNFPFYILKLPLPLGRDEGRIVLS
GDSNTADQNTFAVDTDSGFLVTTRTLDREEKAEYQLQVTLESEDGRVLWGPQRVTVHVKD
ENDQVPQFSQAIYRAQLSQGTRPGVPFLFLEASDGDAPGTANSDLRFHILSQSPPQPLPD
LFQLDPHLGALALSPSGSTSLDHALEETYQLLVQVKDMGDQPSGHQAIATVEISIVENSW
APLEPVHLAENLKVSYPHSIAQVHWSGGDVHYQLESQPPGPFDVDTEGMLHVTMELDREA
QAEYQLQVRAQNSHGEDYAEPLELQVVVMDENDNAPVCSPHDPTVSIPELSPPGTEVARL
SAEDLDAPGSPNSHIVYQLLSPEPEEGAENKALELDPTSGSVTLGTAPLHAGQNILLRVL
AVDLAGSESGLSSTCEVTVMVTDINNHAPEFISSQIGPVTLPEDVKPGALVATLVATDAD
LEPAFRLMDFAIEEGDPEGIFDLSWEPDSDHVQLRLRKNLSYEAAPDHKVVVVVRNVEEL
VGPGPGPAATATVTILVERVVAPLKLDQESYETSIPVSTPAGSLLLTIQPSDPMSRTLRF
SLVNDSEGWLCIKEVSGEVHTAQSLQGAQPGDTYTVLVEAQDTDKPGLSTSATVVVHFLK
ASPVPALTLAAGPSRHLCTPRQDYGVVVSGVSEDPDLTNRNGPYSFALGPNPTVQRDWRL
QPLNDSHAYLTLALHWVEPGEYMVPVVVHHDTHMWQLQVKVIVCRCNVEGQCMRKVGRMK
GMPTKLSAVGVLLGTLAAIGFILILVFTHLALARKDLDQPADSVPLKAAV
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgatctctgcccggccgtggctactttacctctctgtcattcaggctttcaccactgag
gcccagcctgcagaaagcctgcacacagaagtccctgaaaactatggtggaaatttccct
ttttacatactcaagctaccactacccctggggagagatgaaggccgcattgtcctatca
ggagactcaaacacggcagatcaaaacacctttgctgtggatacagactctggctttcta
gtgacgacgaggaccctggaccgggaagagaaagcagagtaccaactacaggtcaccttg
gagtctgaggatggacgtgtcttatggggtccacagcgtgtgactgtgcatgtgaaagat
gagaatgaccaggtaccccaattctcccaggccatctacagagctcagctgagccagggc
accaggcctggggtccccttcctcttccttgaggcttctgatggggatgcaccaggcaca
gctaactccgaccttcgcttccacattctgagccagtccccacctcagcctttaccagac
ctgttccagctggaccctcacctaggggctctggctcttagtcccagtggaagcaccagc
ctagaccatgcccttgaagagacttaccagctattggtacaggtcaaggacatgggtgac
cagccttcaggccaccaggctattgccactgtggagatctccatagtagagaacagctgg
gcacccctagagcctgttcacctggcagagaatctcaaagtttcatacccacacagcatt
gcccaggtgcactggagtggaggagatgtgcactaccagctggagagccagcctccagga
ccctttgatgtggatacagaggggatgctccatgttacgatggagctggaccgagaggcc
caggctgagtaccagctccaagtccgagctcagaattcccatggtgaggactacgcagaa
cccctggagttgcaggtggtggtgatggatgaaaacgacaatgcacctgtctgctcccca
catgacccaacagtcagcatccctgagctcagccccccaggaactgaagtagccaggctc
tcagcagaggatttggatgcccccgggtcacccaattcccacattgtatatcagttgttg
agccctgagcctgaggagggggctgaaaacaaagccttggagttagatccgacctcaggc
agtgtaacactgggaactgccccactccatgctggccagaatatcctgcttcgggtgctg
gctgttgacctagcaggatcagagagtggcctcagcagcacatgtgaggtgacagttatg
gtgacagacatcaacaaccatgcccctgagttcatcagttcccagattgggcctgtaact
cttcctgaggatgtaaaacctggggctctggtggccactctcgtggccactgatgctgac
cttgaacctgccttccgccttatggactttgccattgaagaaggagacccagaagggatc
tttgacctgtcctgggagccagactccgaccatgtccagctcagactccggaagaacctc
agctatgaggcagctcctgatcacaaggtggtggtggtagtgaggaacgtagaagaactg
gtgggcccaggcccaggccctgcggccacggccacggtgactatactagtggagagggtg
gttgctcccctcaagttggaccaggagagctacgagaccagcatcccagtcagcacccca
gctggctccctcctgctgaccatccagccctcagaccccatgagcagaaccctcaggttc
tccctggtcaatgactcagagggctggctctgcatcaaggaggtgtctggggaggtacac
acagcccaatccctgcagggtgcccagcctggagacacatacacagtgcttgtggaggcc
caagacacagataagccaggactgagcacttctgccaccgttgtggtccacttcttgaag
gcctctcctgtcccagcattgactctggctgctgggcccagccgacacctctgtacaccc
cgccaagactacggtgtagttgtgagtggggtcagtgaggaccctgacctgaccaacagg
aatggtccctacagctttgctctcggtcccaatcccactgtgcagcgggattggcgcctc
cagcctctcaacgattcccatgcctacctcaccttggcattgcattgggtagagcctggt
gaatacatggtacctgtggttgtccaccatgatacccatatgtggcaactccaggtcaaa
gtgattgtgtgtcgctgcaatgtggagggccaatgtatgcgcaaggtgggtcgcatgaag
ggaatgcccacgaaactgtcagcggtgggtgtcctcttgggcaccctggcagcgataggc
ttcattctcattcttgtgttcacgcacctggccctggcaaggaaggacctagatcagcca
gcagacagcgtgcccctgaaggcagcggtgtga
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