Mus caroli (Ryukyu mouse): 110300357
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Entry
110300357 CDS
T05910
Symbol
Smarcal1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcal03036
]
110300357 (Smarcal1)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110300357 (Smarcal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
110300357
NCBI-ProteinID:
XP_021026177
Ensembl:
MGP_CAROLIEiJ_G0014245
UniProt:
A0A6P5Q8Q2
LinkDB
All DBs
Position
1:66193037..66244634
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AA seq
910 aa
AA seq
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MSLPLTEEQRKKIEENRQKALARRAEKLSEQPQSAASGSSAAGPSQSKQGSLLNLLAEPS
KPAGHASIFKQQNLNNSFPTDQRPHSSRCSQPSPAEETTGPWKTQGEMSTACPKPNPSPP
GVSNQPLLGYKSSEGQPQATRDTGASSSGPFPRDSELEAKAARPSTSGQSISDSFYALGG
KTPRTEGRPPNILQTTSQNTSFLRGACIKSGDRFRVKIGYNQELIAVFKSLPSRHYDSFT
KTWDFSMSDYRALMKAVERLSSVSLKPLDEVGGSVGGQTSLPSAPSLTFVTGKCMLISRV
RFEVDIGYSEAVIGLFKQMESRSYDIKTRKWSFLLEEHNKLIARSRELKQVQLDPLPKTV
TLAFASQLEKTSPKLKADVPEADLSGVDAKLVSSLMPFQREGVSFAISKRGRLLLADDMG
LGKTVQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPENINVVVTGKGRLTA
GLVNIVSFDLLCKLERQLKTPFKVVIIDESHFLKNIKTARCRAAVPILKVAKRVILLSGT
PAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRLPWGWDYSGSSNLGELKLLLEEAI
MLRRLKSDVLSQLPAKQRKMVVVNPGRISSRAKAALDAAAKEMTKDKTKQQQKEALLVFF
NRTAEAKIPCVVEYILDLLDSGREKFLVFAHHKVILDAVAKELERKNVQHIRIDGSTPSA
DRETQCQRFQLSKGHTVALLSITAANMGLTFSTADLVVFAELFWNPGVLIQAEDRVHRIG
QTNSVSIHYLVAKGTADDYLWPLIQEKIKVLGEAGLSETNFSEMTEATDYVYKDPKQKTI
YDLFQQSFEDDGNDMEFLEAAASFELGSSSGTSGNISQDLGDLLDEDEGSPPKKSRFEFF
DNWDSFSSPF
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgccacttacagaggagcagaggaaaaagattgaagagaatcggcaaaaagct
ttggcccgtcgagctgagaagttgtcagaacagccacagagcgcagcttcaggctcctct
gctgccggcccgtcccagtccaagcagggctctctcctgaatctcctagcggagccttca
aagccagcgggccatgcctccattttcaagcaacagaatctcaataattcatttcctact
gatcagagacctcacagctcccgctgttctcagcccagcccagcagaggaaacgacgggg
ccatggaagacccaaggagagatgtccacagcctgcccaaagcctaacccaagtcctcca
ggagtctctaaccaaccacttttgggttataagtccagcgagggtcagccccaggcaacc
cgggacacaggagcatcctcttctggaccattccccagggactccgagttagaggccaag
gcagcgaggccttccacctctgggcagagcatttcggacagcttttatgcgttaggggga
aaaacacctaggacagaagggagacccccaaacatactgcagaccacatcccaaaacaca
agctttctacggggagcgtgcataaagtctggggatcgcttccgggtaaagatcggctac
aaccaagagctcattgccgtgtttaagtctctgcccagcagacactatgattcttttaca
aagacgtgggacttcagcatgagcgactacagagccttgatgaaggcagtcgagcgactc
tcctcggtctccctgaagccactggatgaggttggtggcagtgttggaggacagaccagc
cttccctcagctccatcccttacctttgtgacaggcaaatgcatgcttatctctcgagtc
cgcttcgaggttgacatcggctattcggaggcggtgattggcctgtttaaacagatggag
tccaggagttacgatatcaagaccaggaagtggagctttctcttggaagagcacaataaa
ctaattgcaaggtcacgtgaactgaagcaagttcagctggaccctctgcccaagacagtg
accctggcatttgcatctcagctggagaaaacgtctcccaaactgaaagcagatgtgcca
gaagcagacctttccggagtggatgccaagcttgtgtctagcctcatgccctttcagagg
gagggagttagctttgccatatcaaaaagaggccgcctgctacttgctgatgacatgggc
ctagggaagaccgtccaagccatctgcatagcagctttttaccgaaaggaatggcccctg
ctggtggtcgtgccttcctctgtgcgcttcacctgggagcaggcctttcttcggtggctt
ccatctcttagcccagagaacatcaacgtggtggtgaccgggaagggccgcctaacagct
ggcttggtcaatattgtcagctttgacctcctttgcaagttggagaggcagctaaaaacc
cctttcaaagtcgtcattattgatgaatcacacttcctcaagaacattaagactgcccgc
tgccgagcagctgtgcctatcctaaaggttgccaagagggtgatcctactgtccggcaca
cccgccatgtcgcggcccgcagagctctacacgcagatcattgctgtcaagccaaccttc
ttccctcagtttcatgcctttggactccgctactgtgatgccaaacggctcccttggggc
tgggactactcgggctcctccaacctgggcgagctgaagctgctgctggaggaggcaatc
atgctgcggcgcctcaaatccgacgtgctctcccagctcccggccaagcagcgcaagatg
gtggtggtcaaccctggtcggatcagctccagggccaaggcagccctggatgcagcagcc
aaagaaatgaccaaggacaaaactaaacagcaacagaaagaagctctccttgtcttcttc
aacagaacagcagaagctaaaatcccatgtgttgtcgagtatatcctggaccttctggac
agcggacgagagaagtttctagtgtttgcacaccataaggtgattctggatgcagttgct
aaggagcttgagaggaagaatgttcaacacatccggatcgatggctccactccctcagca
gaccgggagactcagtgccagcggttccagctgtccaaagggcacacagtggcactgttg
tccatcacagccgccaacatgggcctcaccttctccacagctgatctggtcgtgtttgct
gagctgttctggaacccaggggtgctgatccaggctgaggaccgtgtgcaccgcattgga
cagacaaactctgtgagcatccactacctggtggcgaaaggcacagcagatgactacctt
tggcctctgattcaagagaagattaaagttctgggggaagctgggctttctgagaccaat
ttctcggaaatgacggaagctacagactacgtgtacaaggacccaaagcagaagacgatc
tatgacctgttccagcagtcctttgaagacgatggaaatgacatggaattcctggaagca
gcagcgtcctttgagctaggaagtagttcaggaacctctggaaacatttcccaggatctg
ggagatctcttagatgaagatgaaggcagtccgccaaagaaaagcagatttgaattcttt
gataattgggacagcttttcctctcccttttga
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