Mus caroli (Ryukyu mouse): 110300418
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Entry
110300418 CDS
T05910
Symbol
Comp
Name
(RefSeq) cartilage oligomeric matrix protein isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04145
Phagosome
mcal04151
PI3K-Akt signaling pathway
mcal04510
Focal adhesion
mcal04512
ECM-receptor interaction
mcal04820
Cytoskeleton in muscle cells
mcal05144
Malaria
mcal05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
110300418 (Comp)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110300418 (Comp)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110300418 (Comp)
09144 Cellular community - eukaryotes
04510 Focal adhesion
110300418 (Comp)
09142 Cell motility
04820 Cytoskeleton in muscle cells
110300418 (Comp)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
110300418 (Comp)
09174 Infectious disease: parasitic
05144 Malaria
110300418 (Comp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110300418 (Comp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcal04147
]
110300418 (Comp)
00536 Glycosaminoglycan binding proteins [BR:
mcal00536
]
110300418 (Comp)
Membrane trafficking [BR:
mcal04131
]
Endocytosis
Phagocytosis
Opsonins
110300418 (Comp)
Exosome [BR:
mcal04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110300418 (Comp)
Exosomal proteins of colorectal cancer cells
110300418 (Comp)
Exosomal proteins of bladder cancer cells
110300418 (Comp)
Glycosaminoglycan binding proteins [BR:
mcal00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110300418 (Comp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
COMP
cEGF
EGF_MSP1_1
DUF7630
Motif
Other DBs
NCBI-GeneID:
110300418
NCBI-ProteinID:
XP_021026244
Ensembl:
MGP_CAROLIEiJ_G0031143
UniProt:
A0A6P5QEX3
LinkDB
All DBs
Position
8:62585125..62593543
Genome browser
AA seq
755 aa
AA seq
DB search
MGPTACVLVLALAILRATGQGQIPLGGDLAPQMLRELQETNAALQDVRELLRQQVKEITF
LKNTVMECDACGMQPARTPGLSVRPVPLCAPGSCFPGVVCSETATGARCGPCPPGYTGNG
SHCTDVNECNAHPCFPRVRCINTSPGFHCEACPSGFSGPTHEGVGLTFAKTNKQVCTDIN
ECETGQHNCVPNSVCVNTRGSFQCGPCQPGFVGDQTSGCQRRGQHFCPDGSPSPCHEKAN
CVLERDGSRSCVCAVGWAGNGLLCGRDTDLDGFPDEKLRCSERQCRKDNCVTVPNSGQED
VDRDGIGDACDPDADGDGVPNEQDNCPLVRNPDQRNSDSDKWGDACDNCRSKKNDDQKDT
DRDGRGDACDDDIDGDRIRNVADNCPRVPNFDQSDSDGDGVGDACDNCPQKDNPDQRDVD
HDFVGDACDSDQDQDGDGHQDSRDNCPTVPNSAQQDSDHDGKGDACDDDDDNDGVPDSRD
NCRLVPNPGQEDNDRDGVGDACQGDFDADKVIDKIDVCPENAEVTLTDFRAFQTVVLDPE
GDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTATDDDYAGFIFG
YQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKSSTGPGEQLRNALWHTGDTAS
QVRLLWKDPRNVGWKDKTSYRWFLQHRPQVGYIRVRFYEGPELVADSNVVLDTAMRGGRL
GVFCFSQENIIWANLRYRCNDTIPEDYESHRLQRV
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgggccccactgcctgcgttctagtgctcgccctggctatcctgcgggcgaccggccag
ggccagatcccgctgggtggagacctggccccacagatgctgcgagaacttcaggagact
aatgcggcactgcaagacgtgagagagctgttgcgacagcaggtcaaggagatcaccttc
ctgaagaatacggtgatggaatgtgatgcttgcggaatgcagcccgcacgcactccaggc
ctgagcgtgcggccagtgccgctctgcgcacccggctcctgcttccccggcgtagtctgc
tccgagacagctacgggcgcgcgctgcggcccctgccctcctggctacaccggcaacggc
tcgcactgcaccgacgttaatgagtgcaacgctcacccctgtttcccgcgtgtgcggtgc
atcaataccagccctggctttcactgcgaagcctgtccctctgggttcagtggacccacc
cacgagggcgtgggactgaccttcgctaagaccaacaaacaagtttgcacggatattaat
gagtgtgagaccggccagcacaattgtgttcccaactccgtgtgcgtcaacacccggggc
tccttccagtgcggcccctgccagcccggtttcgtgggcgaccagacgtcaggctgccag
cggcgtgggcagcacttctgccccgatgggtcacccagcccgtgccatgagaaagcaaac
tgcgtcctggagcgggacggctcgaggtcttgcgtgtgtgcagtcggctgggccggcaac
gggctcctgtgcggtcgcgacacggacctggacggttttcctgacgagaagcttcgctgc
tcagagcgccagtgtcgcaaggacaactgcgtgacggtgcccaattcggggcaggaggat
gtggaccgggatggcattggagatgcttgtgacccggatgcagacggggatggagtccct
aacgagcaagacaattgcccgctggttcgaaacccagaccagcgcaactcggacagcgat
aagtggggagatgcctgtgacaactgccggtccaagaaaaacgatgatcagaaagataca
gaccgggatggccggggcgatgcctgcgacgacgacatagatggcgaccgaatacgaaat
gtagctgacaactgtccccgggtgcccaactttgaccagagtgacagtgatggtgatggt
gttggggatgcctgtgacaactgtccccagaaagataacccagaccagagggatgtggac
cacgactttgtgggcgatgcctgtgatagtgaccaagaccaggatggggatggtcaccag
gactcccgggacaactgccccacagtacccaacagtgcccagcaggactcagatcatgat
ggcaagggcgatgcctgtgatgatgatgatgacaatgacggagttcctgacagccgggac
aactgccgcttggtgcctaaccctggccaagaggacaatgaccgggatggcgtgggtgat
gcgtgtcagggtgacttcgatgctgacaaagttatagacaagatcgatgtgtgcccggag
aacgccgaggtcaccctcaccgacttcagggccttccagacggttgtgttggaccccgag
ggtgatgcgcagatcgatcccaactgggtggtactcaatcagggaatggagatcgttcag
accatgaacagtgaccctggcctggctgtgggatacacagccttcaacggcgtggacttc
gagggcacatttcatgtaaacaccgccactgatgatgactatgctggcttcatcttcggc
taccaagacagctcgagtttctacgtagtcatgtggaaacagatggagcagacgtactgg
caggccaatcccttccgggccgtggctgagccagggattcagctcaaggctgtcaagtcc
tctacaggtcccggggaacagctccgaaacgcactgtggcacacgggggacacagcatcc
caggtgcggctactgtggaaggatcctcgaaacgtgggctggaaggataaaacatcctac
cgctggttcctgcagcaccggcctcaagttggctacatcagggtgcggttctatgagggt
cctgagctagtagctgacagcaacgtggtgttggacacagccatgcgtggtggccgcctg
ggtgtcttctgcttctcccaagagaacatcatctgggctaacctgcgctaccgttgcaat
gatacaatccctgaggactacgagagtcaccggctgcagagggtctag
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