Mus caroli (Ryukyu mouse): 110300507
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Entry
110300507 CDS
T05910
Symbol
Nwd1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1 isoform X1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mcal04990
]
110300507 (Nwd1)
Domain-containing proteins not elsewhere classified [BR:
mcal04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
110300507 (Nwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
NACHT
Beta-prop_IFT140_1st
AAA_16
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_LRRK2
Beta-prop_WDR75_1st
PEP5_VPS11_N
KNTC1_N
AAA_22
Beta-prop_DCAF12
NPHP3_N
Beta-prop_Vps41
Beta-prop_Nup120_160
nSTAND1
CNH
ATPase_2
RNA_helicase
AAA
DUF4062
RuvB_N
Beta-prop_RIG_1st
Beta-prop_WDR35_TULP_N
IstB_IS21
nSTAND3
AAA_28
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
110300507
NCBI-ProteinID:
XP_021026365
Ensembl:
MGP_CAROLIEiJ_G0031225
UniProt:
A0A6P5QAU3
LinkDB
All DBs
Position
8:64682645..64747414
Genome browser
AA seq
1563 aa
AA seq
DB search
MDTEREALQCTAYPEVQSFCQRHGLAFEVVDLRWGIPNTQATDYLTTELCLEELERCQKT
SIGPAFVALLGDQYGPCPVPRRIEEKEWEALRAQLTSRPRDLELVTRHFQRDDNTIPPTY
VLQPSGSLVVPGPEEATLTSVLRGGAQEAWRLGLISQEQWMCYHRSVIEWEIEFGLLNSA
RGDQGATVFLRDVQDLNKHILDDCSLKMVDRLADGCLDTNAQSLLSGLKGRILDAQPGAL
KSHHLSWSRDLVNPKNKAHARYLKQLSEQFVARTNHQVLEQLRELELARQELGWLYQEIR
HHLWQSTESTKVFCGHQELLAQLRQRLRQDESRTHTPLVLFGPPGIGKTSLMCKLAQQVP
ELLGHKTVVVLRLLGTSKLSLDARSLLRSLSFQVCLAYGLPLPPAQVLEAHSRVGHFFHT
LLHTVSQRNFESLVLLLDSVDDLDSICHSQRVSWLPLKCPPRVHLILSTCSGQQVLHNLQ
QTLKDPSTYWEVKALSGSQGQEFIQLLLAAERRMLSPGQRDVLWASLPECGHPGRLRLAF
EEARKWASFTVPMPLATTAEEATHQLCIRLEETHGALLVAHVLGYIVSSRYGLSEAELKD
VLSLDDEVLQAVYRDWTPPSKELLRFPPLLWVRLRRDLGHCLVRRPVDGCMLLAIAHRQL
SQVIQVRYLSGPERAKRHGVLAEFFSGAWSQGIKKLITLPLVGKPLNLDRKVAPQPLWFS
GTVANLRKLTELPFHLLHAGRLEELKQEVLGNMSWISCRGISGGIEALLDDFDMCAPHMD
SPEVDLVREAIQLCGPAVELRGLEKSVLYTELLARLLFFAASHPAMIGQLCQQAQSWFRA
CPYPMLVPLAGFLQPPGGPLRATLTGCHKGITAIAWSLEEKLLVVGTQDGAMVVWDVEEQ
QVVHVLMGHTAEVKCVRVFAQGTLAISASKDHTLRLWSLLSGQEKVTILDGGSQNPTEPQ
SWDLHVDERNNVVYSTSGARINMWNLETSKLVFCITGDVSDPWVCVALLAAQGLLLALSK
GGQVSLWSSATGKLQEKHQLSSIKEETPTCAVSIQTRARLVTGFSSGSIALVSAGEDRLL
EKLPDAVGFLVVSEDDSLLVAGFGRFVRIFLADSQGFHRFMASDLEHEDMVETAVLGPEN
NLIITGSRDALIQVWSLSEQGTLLNVLEGMGAPVSLLVRGGTLVVSASQKSSSFKVWDLK
STKKLQSPTPFLDRTGLAAVSHHGSYVYFPKVGDKNKVTIWDLAEGEEQDCLDTSNEVRC
LEVAEQAKLLFTGLVSGIVLVFPLNSRQDVLCIPPPEARKAVNCMSLSKSENRLAIAYDN
IVLVLDISPGDPCPAIEGPTYTFYTQLPETIVSVAVLADYRVVYGMSDGSLFLYDCACSK
VFPLEAHGSRVSCVEVSHGEQLAVSGAEDALLCLWDLQACRGMFEMSYENSCCRGVRCAC
FSRDDKHVFAGMEDRSVTAWSTVDGTLLAVQFVHAVINRIIPTSNGFMAPTSHGYLIRDR
FQCPSVRVSQQDPLKNFKKAVWLVKTRQREELAAAEASQDAEPVAVEGKESKSNKRSQVC
LIL
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atggacacagagcgagaagccctgcagtgcacagcctaccctgaggttcagagcttctgc
caaaggcacggcttggcgtttgaggtggttgatctgaggtggggtattccgaatacgcag
gccactgactacctgaccacggaactctgcttagaagaactggagcgctgtcagaaaaca
tccataggaccagcttttgtggccctcctgggtgaccagtacggcccctgcccggttccc
cggaggattgaggaaaaggagtgggaggcactaagagctcagctgacctccaggcctcga
gatctggagctggtgaccagacatttccagagagacgacaacaccattcctccaacctac
gtcttgcagccttcaggctcactggtggtcccagggcccgaggaggccaccttaacctct
gtcctgagaggtggagcccaggaggcctggaggctaggcctcatcagtcaggagcaatgg
atgtgctatcatcgatcagtcattgagtgggagattgagttcggcctactgaactcagca
cgaggggaccagggagctaccgtcttcctgagagatgtacaggacctcaataaacacatc
ttggatgattgctctctgaagatggtggatcggctggcagatggctgcctggataccaat
gcccagagtcttctcagtggtcttaaagggcgcatactagatgctcagcctggagcccta
aagtcccaccacctgtcctggagccgagacctggtcaaccccaagaacaaggctcacgct
cgttacctaaagcagttgagcgagcagttcgtggccaggaccaaccatcaggtcctggag
cagcttcgagagctggagttggccagacaggagctgggttggctctaccaagagatccgc
caccacctctggcagagcacagagtctaccaaggtcttctgcggccaccaggagctcctg
gcccagctcaggcagcggctcagacaggatgagagccggacacatactcccttggttctc
tttggaccaccaggcattgggaagacctctctcatgtgcaagctagcccaacaggtacca
gagctgcttggccacaagacagtggttgtcctgaggctgctagggacatcaaagctgagc
ctggatgcccgcagcctcctcaggagcctgtccttccaagtgtgcttggcatatgggctg
ccactgcccccagcccaggtcctggaggcccacagcagggtgggccatttcttccatact
ctcctccacactgtgtcacagaggaactttgagtccctggtgttgctcctggactccgtg
gatgacctggactccatatgccattctcagagggtctcttggctgcccctcaagtgtcct
ccaagggtgcacctcatcctctctacatgctcaggccagcaggttttacataacctgcaa
cagaccctcaaggaccccagcacctactgggaggtgaaggccctgtctgggagtcaaggc
caggagttcatacagctgctgctggctgcagagaggaggatgctgagcccgggtcagaga
gatgtcctctgggccagcctcccagagtgtggccacccagggaggctaaggctggccttt
gaggaggcccggaagtgggcctccttcactgtgccaatgcccttggccactacagcagag
gaagccacacaccagctctgtatacgcctggaggagacacatggggcactgctggtggct
catgtactgggctatattgtgtcttccaggtacggtctctcagaagcagagctgaaggat
gtgttgtctttggacgatgaagtcttgcaggctgtgtaccgggactggacaccacccagc
aaagagctgttgcgcttcccgcccctgctgtgggtgcggctccgccgggacctgggacac
tgcctggtcaggaggcccgtggatggctgcatgctactggccattgcacacagacagctg
tcccaggtaatccaagttcgatatctgtctgggcctgagagagccaagaggcatggcgtg
ctagctgaattcttctctggagcctggagccaggggatcaagaaacttatcaccctgcca
cttgtagggaagcccctgaacctggaccgcaaggtggccccacagccactgtggttctca
ggcacagtggccaacctgaggaagctgacggaattgcccttccatctgctgcatgcaggc
cgcttggaggagttgaagcaggaggttctggggaacatgagttggatctcctgtcggggc
atctctggaggcattgaggccctgctggatgattttgacatgtgtgcccctcacatggac
tctcctgaggttgatctggttagagaagccatccagctgtgtggccctgctgtggagctc
cggggcctggagaagagcgtcctatacaccgagctcctggccagactccttttctttgct
gcatcacatccagcaatgatcggacagctgtgccaacaagcccagagctggttccgtgcc
tgcccctacccaatgctggtgcccctggcaggattcctgcagccacctggtggacctctt
cgagccactcttactgggtgtcacaaaggcatcaccgccatagcatggagcctggaggag
aaactcctggtggtgggcacccaggatggtgccatggtcgtgtgggacgtggaggaacaa
caggtggtacacgttctaatgggacacacagctgaagtgaagtgtgtgcgagtgtttgcc
caagggactcttgccatctctgcatcaaaggaccataccctgcgtctgtggagtctgctc
tctggccaggagaaagtcaccattttggatggagggtcacaaaatcccacagagccccag
agttgggaccttcatgtggatgagagaaacaatgttgtatactcgacatctggtgcaagg
atcaacatgtggaatctggaaacttcgaagctggtcttctgtatcacaggagatgtgtct
gatccctgggtctgtgtggctttgttggctgcccagggtttgctgcttgccctgtccaag
ggcggccaggtcagtctgtggagctcagccacgggaaaactgcaggagaaacaccagttg
tccagcatcaaagaagagacacccacctgtgccgtctccatccagacccgggcaaggctg
gtcactggcttcagcagtggctccattgccctggtctccgctggagaagacaggctgctg
gagaagctcccagacgctgtggggttcctggtggtttctgaagacgattcccttcttgtg
gcaggctttggaagatttgtgcggattttcttggctgactcgcaaggcttccaccggttc
atggcttcggatctggaacacgaggacatggtggagacagcagtcttgggtcctgagaac
aatctgatcatcacagggtcccgggatgcacttatccaggtgtggagtttgtcagaacag
gggaccctgctgaatgtccttgagggcatgggcgcccctgtgagtctgctggtccggggt
gggactctggtggtgtctgcatcccagaagtcttcatctttcaaggtctgggatctcaag
tccactaagaagctgcagtctccgactccatttctggaccgcaccggcctcgctgcagtg
tcccaccatggcagctatgtctacttccctaaggttggggacaaaaacaaagtcacaatt
tgggacttggcagaaggtgaggagcaagattgcctggacacatccaatgaggtccgctgt
ctggaggtggctgagcaggccaagctcctcttcacaggcctggtttctgggatcgtgctt
gtgttccccctgaattccaggcaagatgtgctgtgcatccccccacctgaggcacgcaaa
gctgtcaactgcatgtccctgagcaagagtgagaatcgtctggccattgcctatgacaac
attgtcctggtgcttgacatcagccctggggacccatgtcctgccattgaaggccccacc
tacaccttttacacccagctgcctgagaccatagtgagtgtggctgtcctggctgactat
cgtgtggtctacggcatgagcgatggcagcctcttcctgtacgactgtgcatgctctaaa
gtgttccctctggaggctcatgggagcagggtgagctgtgtagaggtcagccacggtgag
cagctagcagtgagcggggctgaagatgcactgctgtgcctctgggacctgcaggcttgc
agggggatgttcgagatgagctatgagaactcctgctgcagaggggtacggtgtgcctgc
ttctccagggatgacaagcatgtatttgcaggcatggaggaccgctctgtcactgcctgg
agcacggtggatggcactcttttggctgtccagtttgttcatgctgtgatcaaccgaatc
atccctacctccaacggcttcatggcccccacaagccacggctatctcatccgtgaccgc
ttccagtgcccatcagtcagagtctcccagcaagaccctctcaagaacttcaagaaggca
gtgtggctggtaaagaccaggcagagggaagaactggctgcagcagaggcctcccaggat
gcagaaccagtggccgtagagggaaaggaatcaaagtcaaataaacgctcacaggtctgc
ctcatactctga
DBGET
integrated database retrieval system
