Mus caroli (Ryukyu mouse): 110300632
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Entry
110300632 CDS
T05910
Symbol
Thsd1
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1 isoform X1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mcal04990
]
110300632 (Thsd1)
Domain-containing proteins not elsewhere classified [BR:
mcal04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
110300632 (Thsd1)
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Gene cluster
GFIT
Motif
Pfam:
THSD1_D2
THSD1_D3
THSD1_N
TSP_1
TSP1_spondin
TSP1_ADAMTS
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
110300632
NCBI-ProteinID:
XP_021026542
Ensembl:
MGP_CAROLIEiJ_G0030896
UniProt:
A0A6P5QB75
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All DBs
Position
8:16767873..16786388
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AA seq
790 aa
AA seq
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MLWEANTNRTLTTKYLLTNQAQGTLQFECFYFKEAGDYWFVMIPEVTDNGTQVPLWEKSA
FLKVEWPVFHIDLNRTAKAAEGTFQVGVFTTQPLCLFPVDKPDMLVDIIFTDRLPEARTS
LGQPLEIRASKRTKLTQGQWVEFGCAPVGVEAYVTVMLRLLGQDSVIASTGPIDLAQKFG
YKLMMAPEVTCESVLEVMVLPPPCVXVQGVLAVYKEAPKHPEERTFQMAENRLPLGERRT
VFNCTLFDVGKNKYCFNFGIVKKSHFSAKECMLIQRNIETWGPWQPWSPCSTTCGDAVRE
RRRLCVTSFPSRPSCSGMSSETSPCSLEECAVFRPPGPSPIPPQDPVKSNNVVTVTGISL
CLFIIFATVLITLWRRFGRAPKCSTPARHNSIHSPGFRKNSDEENICELSEPRGSFSDAG
DGPRGSPGDTGIPLTYRCSASAPPEDEASGSESFQSNAQKIIPPLFSYRLAQQQLKEMKK
KGLTETTKVYHVSQSPLTDTVVDATASPPLDLECPEEAAASKFRIKSPFLDQPGAGTGER
PPSRLDGIVPPPGCAVSPSQTLIRKSQIRSTGGRDGSSERCHSRSSLFRRTASFHETKQS
RPFRERSLSALTPRQVPAYSSRMRTWDQLEDRCRPPSRSTHLLPERTEHFQGAGRTSSPL
GPLSKSYTVGHPRRKPDPGDRQAGLVAGAEKMEPHRAHRGPSPSHRSASRKQSSPIFLKD
SYQKVSQLSPSHFRKDKCQSFPIHPEFAFYDNTSFRLTEAEQRMLDLPGYFGSNEEDETT
STLSVEKLVI
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgggaggccaacaccaatcggactcttaccactaagtacctcctgaccaaccag
gcccaaggaacactccagtttgaatgtttctactttaaggaggctggtgactactggttt
gtaatgatcccggaagtgacagacaatggcacgcaagttcccctctgggagaaaagtgcc
tttctgaaggtagagtggcctgtctttcacattgatttaaataggacagccaaggcagca
gaaggcaccttccaagtgggtgtttttaccacccaaccactctgcctgtttcctgtggac
aagccagacatgctggtggatattatttttactgaccgtcttccagaggcaagaacaagt
ttgggacagccgctggagatcagagccagcaaaaggacaaaactcactcaaggtcagtgg
gtcgagtttggctgtgcacccgtaggggtggaagcctatgttacagtcatgcttaggctg
ttgggtcaagactcagtcattgcttctacgggacctattgacctggctcaaaaattcgga
tacaaattgatgatggcaccggaagtcacgtgtgagtctgtgctggaggtgatggtactg
ccacctccttgtgtcttngtccaaggagtcctggctgtttacaaagaagcccccaaacac
ccagaggagaggactttccagatggctgaaaacagactgcccctgggagagaggaggacg
gtgtttaactgtactttgtttgatgtagggaagaacaaatactgctttaactttggaatt
gtgaagaaaagccatttttctgcaaaggaatgcatgctgattcagagaaatatagaaact
tggggaccatggcagccgtggagcccgtgtagcaccacgtgcggggatgctgtccgagag
cgtcgccgcctgtgtgtcacttctttcccctccagacccagctgctctggaatgtcctca
gagacctctccatgctccctggaggagtgtgctgttttccgtccaccaggcccatcgcct
attccaccccaggacccggtgaagtccaacaacgtggtgaccgtcacagggatctccctg
tgcctgttcatcatctttgccacggtgctcatcactctctggaggaggttcggccgagcc
cccaaatgcagcacgcctgctcgccacaactccattcattcccctggcttccggaagaac
tcggatgaagagaacatctgcgagctgagtgagcctcgaggaagcttctcggatgcgggt
gatggacctaggggaagcccaggggacacgggcatcccattgacttacaggtgcagtgcg
tcagcgcctcctgaggatgaggcctcgggcagtgagagcttccagtccaacgcgcagaag
atcatcccacccttatttagctaccgccttgcccagcagcagctgaaggagatgaagaag
aaagggctgactgagaccaccaaagtgtaccacgtgtctcagagccccctgacagacact
gtagtggatgccacggccagccctcccttagacctggaatgcccggaagaggctgcagca
agcaagttccgaatcaaatctccatttctggaccagcctggggcaggtaccggggaaagg
cctccctccaggctggatggcattgtgcctcctcctggctgtgcggtcagtcccagccag
accctgatccgcaagtcgcagataaggtcgaccggtggcagagatggctcatcggagagg
tgccactccagaagttccctcttcaggaggactgctagttttcatgaaaccaagcagtct
cgccctttccgggagaggagtttgtcagccctgactccccgccaggtccccgcctacagt
tccaggatgaggacctgggaccagctggaggataggtgtcggcctcccagtcgaagtacc
cacctgcttccagagagaacagagcacttccaaggggcaggtcggaccagcagtcctttg
ggtccactctccaaatcctacactgtggggcatcccaggaggaaaccggacccaggggat
cgtcaggccggattggtggcaggagctgagaaaatggagcctcaccgagctcacagggga
ccgtcccccagtcacaggagtgcctcaaggaagcagtcttcccccattttcctcaaagat
agctaccagaaagtcagtcagcttagcccttctcacttcagaaaagataaatgccagagc
ttccccatccaccccgagttcgccttctatgacaatacctctttccgcctcaccgaggct
gagcagagaatgctggacctcccaggatacttcggctccaacgaagaggacgaaaccaca
agtacacttagtgtggagaagttagtgatctag
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