Mus caroli (Ryukyu mouse): 110300866
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Entry
110300866 CDS
T05910
Symbol
Samd1
Name
(RefSeq) atherin
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcal03036
]
110300866 (Samd1)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
110300866 (Samd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_WH
SAMD1_SHD
SAM_1
SAM_PNT
SAM_2
PTPRCAP
Motif
Other DBs
NCBI-GeneID:
110300866
NCBI-ProteinID:
XP_021026764
Ensembl:
MGP_CAROLIEiJ_G0031283
UniProt:
A0A6P5QA63
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All DBs
Position
8:75338038..75340885
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AA seq
424 aa
AA seq
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MAGPPALPPPETAAAATTAAAASSSAASPHYQEWILDTIDSLRSRKARPDLERICRMVRR
RHGPEPERTRAELEKLIQQRAVLRVSYKGSISYRNAARVQPPRRGATPPQQPPPPQPQPP
PEGGAARAGGPARPVSLREVVRYLGGSGGASGRLTRGRVQGLLEEEAARGRLERTRLGAL
ALPRGDRPGRAPPAASARAARSKRGGEERVFEKEEEDEDEDEEEEEEDNVSEGSEVPESD
RPAGAQHHQINGERGPQSAKERVKEWSPCGPYQGQDEGRGPAPGSCTRQVFPMTAVNKEG
GSACVGAAPDSPSPVPLPPGKPALPGADGTPFGCPPGRKEKPTDPVEWTVMDVVEYFTEA
GFPEQATAFQEQEIDGKSLLLMQRTDVLTGLSIRLGPALKIYEHHIKVLQQGHFEDDDPD
GLLG
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcccccggccctacccccgccggagacggcggcggccgccaccacggcggcc
gccgcctcgtcgtccgccgcttccccgcactaccaagagtggattctggacaccatcgac
tcgctgcgctcgcgcaaggcgcggccggacctggagcgcatctgccggatggtgcggcgg
cggcacggcccggagccggagcgcacgcgcgcggagctcgagaaactgatccagcagcgc
gccgtgctccgggtcagctacaaggggagcatctcgtaccgcaacgcggcgcgcgtccag
ccgccccgccgcggagccaccccaccccagcagccgccaccgccgcagccacagccgccg
ccggaggggggcgcggcgcgggcgggcggcccggcgcggcccgtgagcctgcgggaagtc
gtgcgctacctcgggggcagtggcggcgccagcggccgcctcactcgcggccgcgtgcag
gggctgctggaagaggaagcggcgcgaggccgtctggagcgcacccgcctgggagcgctc
gcgctaccccgcggagacagaccgggacgggcgccgccggccgctagcgcacgcgcggcg
cggagcaagagaggtggagaagaacgggtgtttgagaaagaagaggaagatgaggatgaa
gacgaggaggaggaggaggaggacaatgtatctgagggctcagaagtgcccgagagtgac
cgccccgcaggtgctcagcaccaccagattaatggagagcggggccctcagagtgctaag
gagagggtcaaggagtggtcgccctgtggaccctaccagggccaggatgaagggcgggga
ccagcacctggcagctgcacacggcaggtgttcccgatgacagctgtgaataaagaaggg
ggatcagcttgtgttggagcagctccagattccccatctccggtgcctttgcctccagga
aaaccagccctacctggggctgatgggacaccttttggctgtcctcctgggcgcaaggag
aagccgacggacccagtggagtggacagtcatggatgtggtggaatacttcactgaggcg
ggcttcccagagcaagccactgcttttcaagagcaggaaattgatggcaagtctttgttg
ctcatgcaacggacagatgtgctcactggcctgtccatccgcctgggcccagccctgaag
atctacgagcaccacatcaaggtgcttcagcaaggccactttgaggatgatgatcctgat
ggccttctgggctga
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