Mus caroli (Ryukyu mouse): 110300985
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Entry
110300985 CDS
T05910
Symbol
Zc3h12c
Name
(RefSeq) probable ribonuclease ZC3H12C isoform X2
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110300985 (Zc3h12c)
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
110300985 (Zc3h12c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
DUF3723
Motif
Other DBs
NCBI-GeneID:
110300985
NCBI-ProteinID:
XP_021026858
Ensembl:
MGP_CAROLIEiJ_G0032210
UniProt:
A0A6P5QA08
LinkDB
All DBs
Position
9:complement(48934355..48994605)
Genome browser
AA seq
903 aa
AA seq
DB search
MEAGPGAAEGNGPTAVILPLGPSRARGEYGVLCIQEYRKSSKVESSARNSFMGLKDHLGH
DLGHLYMESTDSQMSAAVPWPMVEKPTMDTVNSGKEGKGASEENVSSGDSEGSTSSDHES
EQLSSLSVQPCLLTKTHRQLCRSPCLEPHILKHSDILQDFKPEESQTPSKEVKKPPDVVR
EYQTKLEFALKLGYSEEQVQLVLNKLGTDALINDILGELVKLGNKSEADQTVSTINSVMR
ETSSLESQRSESPMQEVVVDDGENLRPVVIDGSNVAMSHGNKEVFSCRGIKLAVDWFLER
GHKDITVFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIV
KLAFESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDN
FLRKKPIVPEHKKQPCPYGKKCTYGHKCKYYHPERGSQPQRSVADELRAMSRNTAAKTTN
EGGLVKSNSVPCSTKGDSTSDVKRGAPKRQSDPSIRTHVYQDIEEKLPTKNKLETRSVPS
LVSIPATSTAKPQSTTPLSNGLPSGVHFPPQDQRPQGQYPPMMMATKNHGTPMPYEQYPK
CDSPVDVGYYSMLNAYSNLSISGPRSPERRFSLDTDYRVNSVASDCSSEGSMSCGSSDSY
VGYNDRSYVSSPDPQLEESLKCQHMHPHSRLNSQPFLQTFHDPLTRVQSYSHEEPKFHHK
RPLPHLAMHLQHPAVGARSSCPGDYPSPPSSAHSKAPHLGRSLVATRIDSISDSRLYDSS
PSRQRKPYSRQEGLGSWGRPSYGLEAYGYRQTYSLPDNSTPPCYESITFQSLPEQQEPTW
RIPYCGIPHDPPRYQDNREKIFINLCNIFPPDLVRLVMKRNPHMTDAQQLAAAILVEKSQ
LGY
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgggcccgggcgccgccgagggaaacggacccacggctgtgatcctgccgctc
ggaccctcgcgcgctcgtggggaatacggggtgctttgcattcaagaatacaggaaaagc
agcaaagtggagtcaagtgcacggaacagcttcatgggcctgaaggatcacctggggcat
gatcttggccatctttatatggagagcactgactcacagatgagtgcagctgtgccttgg
cctatggtagagaaaccaacaatggatacagtcaattcggggaaggaaggaaaaggggcg
tcagaagagaatgtgagctccggtgactctgagggaagcacgagttctgatcatgagtca
gaacaactgagtagcctttcagtacagccatgcttattaaccaagactcacagacagcta
tgtcgctctccctgcttagagcctcacatactgaaacacagtgacattttgcaagacttt
aaaccagaagagtcccagactccatctaaggaagtgaagaaaccccctgatgtggttcga
gaataccaaacaaaactggagtttgcacttaagttaggttattctgaagaacaggtccag
cttgtgctaaacaaacttggtactgatgctttaatcaatgatatactgggagaacttgtc
aaacttggaaataaaagtgaagccgaccaaacagttagtactattaacagcgtaatgcga
gaaacctcatccctggaatctcagaggtctgaatctccaatgcaagaggttgtagtagat
gacggtgagaatctgagaccagtagttattgatggcagcaatgtggcaatgagccatgga
aacaaagaagtattctcatgccgaggaataaaattggcagtggattggtttttggaaaga
ggccacaaagatatcacggtctttgttcctgcttggagaaaagaacagtcccgccctgac
gccctcatcacagatcaggaaattttacgtaaactagagaaggaaaaaatcctggtattc
acaccatcacggcgtgtccagggcaggcgagtggtgtgctatgacgacagattcatcgtg
aagctggcttttgagtccgatggtataattgtgtccaatgataactacagagatttggca
aatgagaaaccagaatggaagaagttcatagatgagcggttattgatgtattcctttgtc
aatgacaagttcatgcccccagatgaccctcttggcagacatggcccaagtctggataat
tttctgaggaagaaacccattgttcctgagcacaaaaagcagccttgtccctatggaaag
aagtgtacgtacggacacaagtgcaaatactaccacccagaaaggggcagtcagcctcag
cggtcagtggctgatgaacttcgtgccatgtctagaaacacagcagccaaaactacaaat
gaagggggactggtgaaaagcaacagtgttccttgcagcaccaagggagacagcacttcg
gatgttaaacgcggtgctccaaagaggcagtcagacccaagcataaggactcacgtctac
caagacatagaggagaagcttcccaccaaaaacaagttggaaaccaggtctgtaccttcc
ttagttagtatcccggccacttctactgcaaaaccccaaagcactacacctttaagcaat
ggccttccatctggagttcatttcccacctcaggatcaaagaccacagggacaataccct
ccaatgatgatggcaaccaaaaatcatgggacgccaatgccttatgaacagtatccaaaa
tgtgactcccctgttgacgttggatattattccatgttgaatgcatattctaatctgagt
atctcaggcccccgaagtcctgaaaggcgtttctcattagacactgattatagggtaaac
tcagtagcttcagactgcagcagtgaggggagcatgagttgtgggagcagcgactcctat
gtggggtacaatgaccgctcctatgtcagctctcctgacccacagctggaagagagtctc
aagtgtcagcacatgcacccccacagccgccttaattcccagcccttcctgcagactttc
cacgatcccttaaccagagttcagagttacagtcacgaagaaccaaagttccatcacaag
cgtcctcttccacacttggctatgcatctgcagcaccctgccgtgggtgcccgctccagc
tgtcctggcgattacccctctccaccaagttccgcacattcgaaggcaccacacctaggg
aggtccttagtggccacaaggatagacagcatttctgattcccgactctatgatagttct
ccttcaagacaaagaaagccttattctcgccaggaaggcctaggaagctggggtaggcca
agctatgggctggaagcatatggctatcggcagacgtactccttacccgataattccacg
cccccatgctatgagtcgatcaccttccagagcctgcctgagcaacaggaacccacctgg
agaatcccctactgtggaataccacacgatcctccaaggtaccaggacaaccgagagaag
atttttatcaatttgtgtaacatcttcccccctgaccttgtgaggctcgtcatgaaaagg
aatcctcatatgacggatgcccagcagctcgccgcagccatcctagtggagaaatcgcag
ctgggttactga
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