Mus caroli (Ryukyu mouse): 110301112
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Entry
110301112 CDS
T05910
Symbol
Copb2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110301112 (Copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcal04147
]
110301112 (Copb2)
Membrane trafficking [BR:
mcal04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
110301112 (Copb2)
Exosome [BR:
mcal04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
110301112 (Copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
Helicase_dom4_arc
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
110301112
NCBI-ProteinID:
XP_021027023
Ensembl:
MGP_CAROLIEiJ_G0032549
UniProt:
A0A6P5Q490
LinkDB
All DBs
Position
9:94125752..94150770
Genome browser
AA seq
905 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEVQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATASGNASMVNKLAEGAE
RDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKV
NQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQYPLVTPNEERNVMEEAK
GFQPSRPTAQQEPDGKPASSPVIMASQTTHKEEKSLLELEVDLDNLELEDIDTTDIYLDE
DILDD
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttcgacttgatatcaagagaaagctgactgctaggtctgaccgagttaagagt
gtggatttgcatcccacagaaccatggatgttggctagtctttacaatggcagtgtgtgt
gtttggaatcatgaaactcagacactggtgaagacgtttgaagtatgtgatcttcctgtt
cgagctgcaaagtttgttgcaaggaagaactgggtggtgacaggagcagacgatatgcag
atcagagtgttcaattataacaccctggagagggtgcatatgtttgaagcacactcagat
tacattcgttgtattgctgttcatccaacccagccgttcattctcacaagcagtgatgac
atgcttattaagctctgggactgggataaaaaatggtcttgttcacaagtgtttgaagga
cacacgcactacgttatgcagattgtgataaaccccaaagataacaatcagtttgccagt
gcatctctcgacaggaccatcaaggtgtggcagctgggctcttcatccccaaacttcact
ctggaaggacatgaaaaaggcgtgaattgcattgattactacagtggtggtgacaagcca
tacctcatttcaggtgcagatgaccggctcgttaaaatatgggattatcagaacaaaacg
tgtgtgcagaccctggaggggcatgcccagaatgtgtcctgtgcaagcttccatcctgag
ctgcccatcatcatcacagggtcagaagatggaaccgtgcgaatctggcattctagcacc
taccggcttgagagcacgctgaattacggaatggagagggtgtggtgtgtggccagtctg
agagggtccaacaatgtcgctctgggctatgatgaaggaagcatcattgttaagcttggt
cgggaggaacctgccatgtccatggatgccaatggaaagataatctgggccaagcattca
gaagtccagcaggccaacctgaaagcaatgggtgacactgagattaaagatggagaaaga
ttgccactggcagtaaaggacatgggcagttgtgaaatatatccacagaccattcagcac
aatcctaatgggaggtttgttgtggtatgtggagatggggagtatatcatctacactgca
atggcattgaggaacaagagcttcgggtctgcccaggagtttgcatgggcccacgattct
tcagagtatgcaataagagaaagcaacagtgttgtaaagatatttaaaaactttaaggaa
aaaaaatcatttaaacccgattttggagctgaaagtatctatgggggcttcttgctggga
gtcaggtctgtaaatggcttagccttctatgactgggagaatactgaactcatccgcaga
attgaaattcagcccaagcacatcttctggtctgattctggagagctggtctgtatcgcc
accgaggagtcattttttattcttaaatatctgtcagaaaaagtcttggctgcacaggaa
acacatgagggagttactgaagatggcattgaagatgcctttgaggttcttggtgaaatt
caggaaattgtgaaaactgggctgtgggtaggtgactgcttcatttacacaagttctgtg
aacagattaaactattacgtgggaggagagatagtcaccatcgcccacctggacaggaca
atgtatcttctgggctatattccaaaagacaatagactttatctgggggataaggaattg
aatattgttagctactccctgttggtttcagtcctggaataccagactgctgtcatgcgg
agggatttcagcatggcggataaggtcctcccgaccatccccaaagaacagaggaccaga
gttgcacacttcttggaaaagcagggcttcaagcagcaagcacttacagtatccacagat
cctgaacatcgttttgagcttgctcttcaacttggagagttgaaaattgcttaccagtta
gcagtggaagcagagtcggagcagaagtggaaacaacttgctgaactcgccattagtaaa
tgtcagttcagcctagcccaggagtgtctgcaccatgcccaggattatggtggtctgctg
ctcttggccactgcctctggaaatgccagtatggtgaacaagctggcagaaggtgcggag
agagacggcaaaaataacgtggcattcatgagctattttttacagggcaagcttgatgct
tgcctagagctcttgatcagaacaggaagactcccagaagctgccttcctggcccgaact
tacttacccagtcaggtctcaagggtagtgaaactgtggagggagaatctttcaaaagtc
aaccagaaagcagcagaatcccttgctgatcctacagagtatgaaaatcttttccctgga
ttaaaagaagcctttgttgttgaagaatgggtaaaggagacacatgcggatttgtggcca
gccaagcagtaccctcttgtcacgccaaatgaagagagaaatgttatggaagaggcaaaa
ggctttcagccctcaagacccacagcccagcaggaacctgatggaaaacctgcttctagc
ccagttatcatggcctcccaaactacccacaaagaagaaaagagtttactagaactagaa
gttgatttggataacttggaattagaggatatcgacacaacagacatttatctggatgaa
gatattctggatgactaa
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integrated database retrieval system
