Mus caroli (Ryukyu mouse): 110301166
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Entry
110301166 CDS
T05910
Symbol
Dmxl2
Name
(RefSeq) dmX-like protein 2 isoform X1
KO
K24155
rabconnectin-3a
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
110301166 (Dmxl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110301166 (Dmxl2)
Membrane trafficking [BR:
mcal04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
110301166 (Dmxl2)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
110301166 (Dmxl2)
RAVE complex
110301166 (Dmxl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WDR55
Beta-prop_HPS5
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_LRRK2
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
110301166
NCBI-ProteinID:
XP_021027104
Ensembl:
MGP_CAROLIEiJ_G0032227
UniProt:
A0A6P5QAX0
LinkDB
All DBs
Position
9:complement(51110981..51252573)
Genome browser
AA seq
3054 aa
AA seq
DB search
MHLHQVLTGAVNPGDNCYSVGSVGDVPFTAYGSGCDIVILASDFECVQIIPGAKHGNIQV
SCVECSNQHGRVAASYGNAVCIFEPLGINSHKRNSQLKCQWLKTGQFFLSSVTYNLAWDP
QDNRLLTATDSIQLWAPPGSDILEEEEEVDNRVPPVLNDWKCIWQCKTSVSVHLMEWSPD
GEYFATAGKDDCLLKVWYPMTGWKSSIIPQDPHEVKRRRASTQFSFVYLAHPRAVTGFSW
RKTSKYMPRGSVCNVLLTSCHDGVCRLWAETLLPEDCLLGEQICETTTSSVASNLSSAGK
HKDRIQHALETIHHLKNLRKGQRRSSVLVTHAELMPDKTATHEVHRHISHHANALCHFHI
AASINPTTDIPNVLVGTAFNIDDINGGFVVHWLNNKEFHFTSSTEIFMHQLRKLSEKQLD
HESDDADREDEERSQEERERGLRMKLDHELSLDRESEAGTGSSEHEDGEREGSPRTHARP
SISLPLPTVLLDRKIETLLTEWNKNPDMLFTIHPVDGTFLVWHVKYLDEYNPGIFRQVQV
SFSSRIPVAFPSGDANSLSKNIMMYACVNATKDSYNNPSQQEMLSVDSSHGSQLHSPSHS
TDMNILAPTVMMVSKHIDGSLNQWAVTFADKSAFTTVLTVSHKFRYCGHRFHLNDLACHS
VLPLLLTSSHHNALLTPESDCQWDSDSKLNRLIDPVKHTKASSKQPLRNAATRTFHDPNA
IYSELILWRVDPIGPLSYTGGVSELARINSLHTSAFSNVAWLPTLIPSYCLGTYCNSASA
CFVASDGKNLRLYQAVVDARKLLDELSDPEASKLIGEVFNIVSQQSTARPGCIIELDAIT
DQCGSNTQLLHVFQEDFIIGYKPHKEDMEKKEKETEIFFQPSQGYRPPPFSEKFFLVVIE
KDGNNNSILHMWHLHLKSVQACLAKAAEGISSDSLLSVPGQKNLDSSPETSSSMSSMPHS
SSIANLQTASKLILSSRLVYSQPLDLPEAVEVIRATPSAGHLSSSSIYPVCLAPYLVVTT
CSDNKVRFWKCCMETNSLGSTSDESETYHWRRWPLMNDEGEDNSSTVSIVGRPVAVSCSY
TGRLAVAYKQPIHHNGFISKEFSMHVCIFECESTGGSEWVLEQTIHLDDLVKVGSVLDSR
VSVDSNLFVYSKSDAFLSKDRYLIPNIKHLVHLDWVSKEDGSHILTVGVGANIFMYGRLS
GIVSDQTNSKDGVAVITLPLGGSIKQGVKSRWVLLRSIDLVSSVDGTPSLPVSLSWVRDG
ILVVGMDCEMHVYAQWKHSVKFGDIDADSPVEETIQDHSAFKSSMLARKSIVEGAAIPDD
VFCSPTVVQDGGLFEAAHALSPTLPQYHPTQLLELMDLGKVRRAKAILSHLVKCIAGEVA
IVRDPDAGEGTKRHLSRTISVSGSTAKDTVTIGKDGTRDYTEIDSIPPLPLHALLAADQD
TSYRISEDSTKKPQSYEDHIESQSEDQYSELFQVQEITTDDIDLEPEKRENKSKVINLSQ
YGPAYFGQEHARVLSSHLMHSSLPGLTRLEQMFLVALADTVATTSTELDENRDKNYSGRD
TLDECGLRYLLAMRLHTCLLTSLPPLYRVQLLHQGVSTCHFAWAFHSEAEEELINMIPAI
QRGDPQWSELRAMGIGWWVRNVNTLRRCIEKVAKAAFQRNNEALDAALFYLSMKKKAVVW
GLFRSQHDEKMTTFFSHNFNEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIEV
CLEKMEDIQLAMVIARLFESEFETSSTYISILNQKVLGCQKDGTGFDCKRLHPDPFLRSL
AYWVVKDYTRALDTLLEQTPKEDDEQQVIIKSCNPVVFSFYNYLRTHPLLIRRNLASPEG
TLATLGLKTEKNIADKINLIERKLFFTTANAHFKVGCPVLALEVLSKIPKVTKISSLTAK
KDQLDFVSGRMENGPSESKPVSSSDGGSGADWSAVTSSQFDWSQPMVTVDEEPLRLDWGD
DHDGALEEDDGGGLVMKTTDAKKAGQDQSASDPSALLTPQDEECAEGDTEVDVIAEQLKF
RACLKILMTELRTLATGYEVDGGKLRFQLYNWLEKEIAALHDICNHESVIKEYSSKAYSK
VESELLDQEEMMDKPDIGSYERHQIERRRLQAKREHAERRKLWLQKNQDLLRVFLSYCSL
HGAQGGGLASVRMELKFLLQESQQETTVKQLQSPLPLPTTLPLLSASIASTKTVIANPVL
YLNNHIHDILYTIVQMKTPPHPSVEDVKVHTLHSLAASLSASIYQALCDSHSYSQSEGNQ
FTGMAYQGLLLSDRRRLRTESIEEHATPNSAPAQWPGVSSLINLLSSAQDEDQPKLNVLL
CEAVVAVYLSLLIHALATNSSNELFRLAAHPLNNRMWAAVFGGGVKLVVKPRRQSESIAA
PPVASEDIDKHRRRFNMRMLVPGRPVKDATPPPVPAERPSYKEKFIPPELSMWDYFVAKP
FLPLSDSGVIYDSDESVHSDDEEDDAFFSDTQIQEHQDPNSYSWALLHLTMVKLALHNIK
NFFPIAGLEFSELPVTSPLGIAVIKNLENWEQILQEKMDHFEGPPPNYVNTYPTDLSVGA
GPAILRNKAMLEPENTPFKSRDSSALPVKRLWHFLVKQEVLQETFIRYIFTKKRKQSESV
EEHVEQVKHNSVAEDCHIKVEADLGYPGGKAKVIHKESDMIMAFSINKANCNEIVLASTH
DVQELDVTSLLACQSYIWIGEEYDRESKSSDDIDYRGSTTTLYQPGAASHSSSQPHPPPS
LPWLGSGQTSTGATVLMKRNLHNVKRMTSHPVHQYYLTGAQDGSVRMFEWTRPQQLVCFR
QAGNARVTRLYFNSQGNKCGVADGEGFLSIWQVNQTASNPKPYMSWQCHSKATSDFAFIT
SSSLVATSGHSNDNRNVCLWDTLISPGNSLIHGFTCHDHGATVLQYAPKQQLLISGGRKG
YICIFDIRQRQLMHTFQAHDSAIKALALDSCEEYFTTGSAEGNIKVWRLTGHGLIHSFKS
EHAKQSIFRNIGAGVMQIDISQDNRLFSCGADGTLKTRVLPSAFNIPNRILDIL
NT seq
9165 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcatcaggtcctcaccggggctgtcaaccctggagacaactgctattcggtg
ggcagcgtcggggacgtccccttcacggcatatggatcaggctgtgatattgttattctg
gcgagtgactttgaatgtgtgcagatcatccctggtgctaagcatgggaacatccaagtc
agttgtgtggaatgctccaaccagcatgggagagttgcagcttcatatgggaatgctgtg
tgtatttttgaacccctgggtataaattctcataagagaaacagtcaactcaagtgtcag
tggcttaaaactgggcagttttttttgagttccgtgacatacaacttagcatgggatcct
caagataacagattgctgacagcaactgattcgattcagctgtgggctcctccaggcagt
gatattctagaagaggaggaagaagtcgataatagagtccctcctgttttaaatgattgg
aagtgcatctggcagtgcaaaacctcagtgtctgtacatctgatggaatggtctcctgac
ggtgaatactttgccactgctggaaaggatgactgtcttctgaaagtctggtaccctatg
actggctggaagtcttcaatcatacctcaagatccccatgaagtgaagaggagacgggct
tccactcagttctcctttgtttacttggcacaccctcgagccgtgacaggtttctcatgg
cggaaaactagcaagtatatgcccaggggctctgtctgtaatgtcttactgacttcatgt
catgatggtgtgtgtcggctctgggcagaaacattgttacctgaagactgccttttgggt
gaacagatttgtgagaccactacctccagcgttgccagcaacctctcttctgctgggaaa
cacaaagacaggatccagcatgctcttgagacaatacaccatttgaagaatttaaggaaa
ggacaaaggaggtcttctgttcttgtaactcacgctgaactgatgcctgacaagactgca
acccacgaggttcacagacacatttctcaccatgccaacgcactgtgccactttcacatc
gcggcgagcatcaatcctactacagatattccaaatgtcctggttggcactgcatttaat
attgatgatatcaatggaggatttgtagttcattggttaaataacaaggaatttcatttt
acatcatcaactgaaatatttatgcaccaattacgaaaactttctgaaaaacaattagat
catgaaagtgatgatgcagatagagaagatgaggagcgctcacaggaggagagagagagg
ggtttacgcatgaaactggaccatgaattatctctggatagagaatctgaggcaggtaca
ggatcatcagaacatgaagatggagaacgagaggggagtcctagaactcatgcacgacct
agcatctcattgccactgcccacagtactgctggatcggaagattgaaacgctgctgaca
gagtggaacaagaaccctgacatgttattcacgatacaccctgtagatgggacttttcta
gtgtggcatgtaaagtatttggatgaatataaccctggaatatttagacaagttcaggtt
tctttttcctctcggattcctgttgcatttccctctggggacgccaactctcttagtaaa
aacatcatgatgtatgcttgtgtgaatgctacaaaagattcatacaacaacccatcccag
caagagatgctgtctgtagatagttcccacggatcacagctacactctccatcccacagc
accgatatgaacattttagcacctacggtaatgatggtctccaaacacatagatgggtct
ttgaatcagtgggcagtcacgtttgctgacaagtcagcctttaccactgttctgactgtg
tcccacaaattcagatactgcggtcaccgattccacctcaatgacctggcatgccattct
gttttacccctcttgctgacatcttcccatcataatgctctgttgactcctgaatcagac
tgtcagtgggactccgatagtaaattaaatagattaatagatcctgtaaaacacacaaaa
gcttcatcaaaacagcctctgagaaatgcagcaacccgtacatttcatgacccaaatgca
atctacagtgaacttattctgtggcgtgtagaccccattggacctttgtcatatactgga
ggagtgtcagaattggctcgaattaactctttacatacctcagccttctctaatgtggca
tggcttccaactcttattcctagttactgtcttggcacatactgcaattctgcaagtgct
tgctttgtcgcatctgatggcaaaaatctgagactctatcaagctgtggtcgatgcaaga
aaattattagatgaactgtcagacccagaagcctcaaaactgatcggagaagtgtttaac
attgtgagccaacagtccactgctcgaccaggctgcattattgagcttgatgccataact
gaccaatgtggatcaaatacacagctactgcacgtgtttcaagaagacttcattattgga
tataagccacacaaagaagatatggagaaaaaggaaaaggaaacagaaatatttttccaa
ccatcacaaggatatcgaccaccaccattttcagaaaaattctttttagtagtcattgag
aaggatggaaataataactctattctccatatgtggcaccttcatcttaagtctgtacaa
gcgtgcttagccaaagctgcagagggcatctcatctgacagtctgctttcagtcccggga
cagaagaacctggactcttctccagaaacctcctctagtatgagctccatgccacattcc
tcatcaattgccaatcttcagactgctagtaaacttattctgagctccagacttgtatat
agtcagcccctggatctgccggaagctgttgaagtaataagagcaacgccttcagcaggt
catctgagttcctcttcaatttacccagtgtgccttgcaccttatttagtggttacaact
tgctctgacaataaagtacgcttctggaaatgttgtatggaaactaactcactgggcagt
acaagtgatgagagtgagacctatcattggaggagatggcccttgatgaatgatgaagga
gaagataacagcagtactgtgagcatcgtgggaagacctgttgctgttagctgctcatac
acaggccgccttgcagtggcttacaagcaacccatccaccacaatggttttatttctaaa
gaattctctatgcatgtctgtatatttgaatgcgaatctacaggagggtcggaatgggtt
ttagaacagacgatccatcttgatgatttagttaaggttggaagtgtacttgattcgagg
gtcagtgttgacagtaatctgtttgtatatagcaaatcagatgcatttttaagtaaggat
agataccttattccaaatatcaagcatttagtacatttggactgggtgtcaaaagaagat
ggctctcacatcctcacagtgggggttggtgctaatatcttcatgtatggaagactttca
ggaattgtaagtgatcaaaccaacagtaaggatggagtagctgtcatcactttaccacta
ggtggtagtatcaagcaaggagttaagtcaagatgggttcttctgagatctatagactta
gtatcctctgtggatggcacaccttcactgcctgtttctctctcttgggtaagagatgga
atattggtggtgggaatggattgtgaaatgcatgtatatgcccagtggaagcattctgtc
aaatttggagacattgacgctgatagtcctgttgaagagacaatacaagatcattctgcc
tttaaatcctctatgctggcaagaaaaagtattgttgaaggagcagctatccctgatgat
gtcttctgttcacctactgtggttcaagatggtggcttatttgaggctgcgcatgcactc
tctcctactctgccacagtatcatccaactcagctgttagaattaatggacttagggaaa
gttagaagagctaaggccattctttcccatttggtaaagtgcatcgcaggtgaagttgca
atagttcgggatcctgatgctggagaaggaactaagcggcatctctctcggaccattagt
gtgagcggcagtacagcaaaggatacagttaccattgggaaggatggtactcgggactat
accgagatagactctattcctccactaccactacatgcattgcttgctgcagaccaggac
acatcctacagaatttcagaggacagtacaaaaaagccacagagctatgaggaccatatt
gaaagccagtcagaggatcaatattcagagctgttccaagtccaggagataacaacagat
gatattgatttagagccagaaaagagagagaacaaatcaaaagtaataaatctgtcacag
tatggaccagcttattttggccaggaacatgctagagtactttcaagtcatctaatgcac
tcaagtctgccaggccttacccgcttggagcagatgttccttgtagcactggcggatact
gtggcaaccaccagtacggagcttgatgaaaacagggataagaactactcaggaagagac
accttagatgagtgtggtttgagatacctgttagctatgcgcttgcacacatgcctgtta
acatcactgcctcctttataccgagtccagctccttcaccaaggagtgtctacctgccac
tttgcctgggcttttcattctgaagctgaggaagaactgatcaatatgattccagcaatc
caaagaggggaccctcagtggtctgaattaagggctatgggaataggctggtgggtgagg
aatgttaacacacttcgaagatgcattgaaaaggttgccaaagctgcttttcagaggaac
aacgaggccttagatgccgctttgttctacctttccatgaagaagaaagcggtagtgtgg
ggtctgttcaggtcacaacatgatgaaaaaatgacaacattcttcagccacaactttaat
gaagatagatggcggaaagctgctttgaaaaacgccttttctttacttggaaagcagcgc
tttgagcagtctgctgcttttttcttgttagctggttcattgaaagatgcaatcgaggta
tgtcttgaaaaaatggaagatattcaactagccatggttattgcccgtttatttgaatct
gaatttgagacttcatctacttacatctctattttgaatcagaaagttttgggttgtcag
aaagatggcacaggattcgattgcaaaaggttacatcctgacccttttctgcgtagtctt
gcctattgggtagtgaaagattatacccgagccttggataccttactggaacagacacca
aaggaagatgacgagcaacaagtcatcatcaaatcttgtaacccagtggtgttcagtttt
tacaactaccttcgaacacatcctttacttattcgaagaaatcttgcttcccccgaagga
actttggcaactttaggtctcaaaactgagaaaaacattgctgataaaattaacctcata
gaaagaaaattattttttaccaccgctaatgctcattttaaagttggatgtcctgtttta
gcccttgaagtactttctaaaattcctaaagtaaccaaaatatcctccttgactgcaaaa
aaagatcagcttgactttgtttctggaaggatggagaacgggccatcagaatcaaaacca
gtgagcagtagtgatggtggttctggggctgactggtcggctgtgacttcttcccagttt
gactggagtcagccaatggttacagttgatgaggagcctcttaggctcgattggggtgac
gatcatgacggtgccttagaagaggatgatggcggtggcttagtaatgaaaactacagat
gccaagaaggctggccaggaccagagtgcctcagaccctagtgcattgctgactcctcag
gacgaggagtgtgctgaaggcgatactgaggtcgatgtgattgctgaacaactcaagttc
cgagcttgcttgaagatccttatgactgagttaagaactttggctacaggttatgaagta
gatggagggaagctgagatttcagctctataactggcttgaaaaggaaattgctgccttg
catgacatatgcaaccatgaatcagttattaaagaatattccagcaaagcgtattctaaa
gtagagagtgaacttctggatcaggaggagatgatggacaagccagatattggttcctat
gagcgccaccaaatagaaagacgacggctgcaggctaaaagggagcatgcagaaagacga
aagctgtggttgcagaaaaaccaagatctcctgagagtatttctcagttactgtagcctt
cacggagcccagggcggtggtctggcttcagtaagaatggaactcaaatttttgctgcaa
gagtcacagcaggaaactacagtgaagcagctccagtccccactgccactacctaccacg
ttgcctctgctttcagcaagtatcgcatcaacaaaaacagtcatagctaaccctgtattg
tatttaaataaccacatccatgatatactttatactattgtgcagatgaaaacaccacct
catcccagtgttgaagatgtgaaggtgcacacacttcattcactagcagcatcactttct
gcatcaatttaccaggcattatgtgacagtcatagctacagtcagtcggaaggaaatcag
ttcacaggaatggcctatcaagggcttcttctaagtgatcgacgacgcctcaggacagaa
agcattgaagagcatgcaacaccaaactcagctcctgctcagtggcctggtgtgagctca
ctcattaatctcttgagttctgcccaagatgaagaccagccaaaattgaatgttctgttg
tgtgaagctgttgttgctgtttacttaagtttactgatacatgctcttgccacaaattct
tccaatgaattgtttcggcttgcagcccacccattaaataatcgaatgtgggctgctgtt
ttcggagggggtgtaaaacttgttgtgaagcctcggaggcaatcagaaagtatcgcagca
cctcctgtcgcctctgaggacatagacaaacaccggaggagattcaacatgaggatgctg
gtccctggaaggcctgtaaaagatgctaccccacccccagtgcctgcagaaagaccatct
tacaaggaaaaatttattcccccagaacttagtatgtgggactactttgttgcaaagccg
ttcctccctttgtctgatagtggtgtcatatatgattctgatgaaagtgtgcacagtgat
gatgaagaggatgatgcctttttttcagacacacaaatacaggagcatcaagatcctaat
tcttatagctgggctcttctgcatttgacaatggttaagctggcacttcacaatatcaag
aatttttttcctattgctgggctggaattctctgagctccctgtgacatcaccgctagga
atcgctgtcattaaaaacttggagaactgggaacagattctgcaggagaaaatggatcac
tttgaaggtccaccccctaactatgtcaacacatacccaactgacctctcagtgggagct
gggccagctattctccgaaataaagcaatgttagagcctgaaaacactccattcaaatcc
cgggattcgtctgcacttccagtcaaacgactctggcatttccttgtcaaacaggaagtt
cttcaggagacatttattagatacattttcactaagaaaagaaagcagagtgagtctgta
gaagaacatgtggagcaggtcaaacacaactccgtagcagaagattgccacatcaaggtc
gaagctgatctgggatacccaggagggaaggcaaaggtcattcataaggaatctgacatg
atcatggcattctctattaataaggcaaactgtaatgaaattgttttggcttcaacacat
gatgttcaagaactcgatgtcacttctctactggcttgtcaatcatatatatggattgga
gaagaatatgacagagagtcgaaaagttcagatgatattgattaccgtggttccactaca
accctgtaccagcctggtgcagcctctcattcctcaagccagccacacccacctccatct
ctgccatggctaggcagtggacagaccagcactggggctactgtgctcatgaaaaggaat
ctacataatgttaagagaatgacatcacaccccgtccatcagtactatctcacaggggcc
caggacggcagtgtccgaatgtttgagtggacgcgacctcagcaacttgtctgtttccgt
caagctggcaatgcaagggttactagattatattttaattcacaaggcaacaagtgcggt
gttgcggacggagaaggttttctgagtatctggcaagttaaccaaactgcatcaaaccct
aaaccttacatgagttggcagtgccacagtaaggccacaagtgactttgcatttatcacc
tcttcaagtctagttgcaacctctggacattccaatgacaatagaaacgtatgcctctgg
gacacactgatatcacctggaaacagcctcattcacggttttacttgtcatgaccatggt
gccacagtactccaatatgcccccaagcaacaactcctaatctctgggggtaggaaaggc
tacatctgcatttttgacatcagacagagacagctaatgcacaccttccaggcacacgac
tccgctattaaggctttggctctggactcctgtgaggaatacttcactacaggctcagca
gaaggcaatataaaagtatggagattgacaggtcatggcctgattcattcatttaagagt
gagcatgctaagcagtccatatttcggaacattggcgctggagtcatgcagattgatatc
agccaggacaatcggctgttctcctgtggtgcagacggcacgctgaaaaccagggttctg
cctagtgcttttaacatccctaatcgaattcttgacattctgtag
DBGET
integrated database retrieval system
