Mus caroli (Ryukyu mouse): 110301221
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Entry
110301221 CDS
T05910
Symbol
Arhgef12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X2
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04270
Vascular smooth muscle contraction
mcal04360
Axon guidance
mcal04611
Platelet activation
mcal04625
C-type lectin receptor signaling pathway
mcal04810
Regulation of actin cytoskeleton
mcal05135
Yersinia infection
mcal05152
Tuberculosis
mcal05163
Human cytomegalovirus infection
mcal05200
Pathways in cancer
mcal05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
110301221 (Arhgef12)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
110301221 (Arhgef12)
04625 C-type lectin receptor signaling pathway
110301221 (Arhgef12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
110301221 (Arhgef12)
09158 Development and regeneration
04360 Axon guidance
110301221 (Arhgef12)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110301221 (Arhgef12)
05205 Proteoglycans in cancer
110301221 (Arhgef12)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
110301221 (Arhgef12)
09171 Infectious disease: bacterial
05135 Yersinia infection
110301221 (Arhgef12)
05152 Tuberculosis
110301221 (Arhgef12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110301221 (Arhgef12)
Membrane trafficking [BR:
mcal04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
110301221 (Arhgef12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
PH_13
SOS1_NGEF_PH
Pept_S41_N_bact
Ribonuc_2-5A
AAA_23
Motif
Other DBs
NCBI-GeneID:
110301221
NCBI-ProteinID:
XP_021027219
Ensembl:
MGP_CAROLIEiJ_G0032087
UniProt:
A0A6P5QB43
LinkDB
All DBs
Position
9:complement(39845955..39988022)
Genome browser
AA seq
1543 aa
AA seq
DB search
MSGTQSTITDRFPLKKPIRHGSILNRESPTDKKQKVERSSSHDFDPTDSSSKKTKSSSEE
SRSEIYGLVQRCVIIQKDDNGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGT
LVTHSNHLEVVKLIRSGSYVALTVQGRPPGSPQIPLADSEVEPSVTGHMSPIMTSPHSPG
AAGNMERITSPVLMGEENNVVHNQKVEILRKMLQKEQERLQLLQEDYNRTATQRLLKEIQ
EAKKHIPQLQEQLSKATGSAQDGAVNAPSRPLGDALTLSEAEADPGDGLCRTDWSSGDAS
RPSSDSADSPKSSLRERSYLEEAPERSEGVQDSETQSLVGSPSTRGAPHIIGAEDDDFGA
EHEQINGQCSCFQSIELLKSRPAHLAVFLHHVVSQFDPATLLCYLYSDLYKQTNSKETRR
VFLEFHQFFLDRSAHLKVPVPEEISVDLEKRRPELIPEDLHRHYIQTMQERVHPEVQRHL
EDFRQKRSMGLTLAESELTKLDAERDKDRGTLEKERACAEQIVTKIEEVLLTAQAVEEER
SSTMQYVILMYMKYLGVKVKEPRNLEHKRGRIGFLPKIKQSMKKDREGEEKGKRRGFPSI
LGPPRRPSRHDNSAIGRAMEIQKSRHPKHLSTPSSVSPEPQDPAKLRQSGVANEGTDTGY
LPASSMSSATSGTALSQEGGRENDTGTKQVGEALAPGDCLDSTPRVPNTVFDFPPPLLDQ
VQEEDCEVERVTEHGTPKAFRKFDSIAFGESQSEDEQFENDLETDPPNWQQLVSREVLLG
LKPSEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSREGILSPSELRKIFSNLEDILQ
LHVGLNEQMKAVRKRNETSVIDHIGEDLLIWFSGPGEEKLKHAAATFCSNQPFALEMIKS
RQKKDSRFHTFVQDAESNPLCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTEWPPEREKV
KKAADHCRQILNYVNQAVREAENKQRLEDYQRRLDTSNLKLSEYPNVDELRNLDLTKRKM
IHEGPLVWKVNRDKSIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVI
KLSTVLVRQVATDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQSTK
PIPLPQPPPCEGDNEEEEPAKLKVEHHDLSVTGLQSPDRVLGLESPLISSKPQSHSLNTP
GKSEAEHLFVTAAQFAKEQHTNGTFKEGDGGYPVTIPGPHLPVSEERWALDALRNLGLLK
QLLVQQLGLTEKSTQEDWQSFSRYGPASEEVQADSGIRDLENVKACHAREGQMSFKTGTG
DIATCDSPRTSTESCAAQDSVILASQDSQASNILVMDHMILTPEMPTAEPEGGLDESGEH
FFDAREAHSDDNPSEGDGAVKKEEKDVNLRISGNCLILDGYDAVQESSTDEEVASSFPLQ
PVMGIPAVDSSHQQQHSPQNAHAEGLVSPFTPEFLVQRHWRAMEDTCFEIQSPSCTDSQS
QILEYIHKIEADLEHLKKVEESYALLCQRLAGSALPDKLSDKS
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtctactatcacggacaggtttcccctcaaaaaacctataaggcat
ggaagtattttgaaccgagagtcaccaacagataagaaacagaaagtcgaacgcagttca
tcacatgattttgaccccacagatagctcctccaagaagacaaagtctagttcagaggag
agtagatccgagatctatggtcttgttcagcgctgtgtgatcatccagaaagacgacaat
ggcttcgggctgacagtcagtggagacaatccagtcttcgtacaatctgtcaaagaagat
ggagcagccatgcgtgctggagtacaaacaggtgatcgaatcatcaaggtgaatggtact
ctggtgacccattcaaatcatctggaggtggtgaaactaatcagatctggttcctatgta
gctctcactgtccagggacgcccacctgggtcgccccagatcccacttgctgattctgaa
gtagagccatcagtcactggacatatgtctcccattatgacatcccctcattcccctgga
gcagccgggaatatggagagaatcaccagtcctgtgctcatgggggaggaaaacaatgtg
gtccataaccagaaagtagagattctgagaaagatgttacagaaggaacaggaacggctg
cagttgctgcaggaagattacaaccgaacggctacccaaagattgctcaaggagatccag
gaggccaagaagcacatcccgcagctgcaggagcagctgtccaaagccacgggctctgct
caggatggagctgtaaatgcaccctccaggccattaggtgatgccctaaccctcagtgag
gcagaagcagatcctggagatggcctgtgcaggactgactggagcagtggagatgcttct
cggcccagtagtgacagtgctgatagtcccaagagtagcctgagagaaagaagttacctg
gaggaagccccagagagaagtgaaggagttcaagactctgagacacagtcgctggtcggc
agtccctccacccggggcgcccctcacatcattggagcagaggatgatgacttcggtgct
gagcatgagcagatcaatggacagtgcagctgtttccagagcattgaattgctgaagtct
cgccctgctcacttggctgttttcttacaccatgtagtctcacagtttgaccctgcaaca
ttgctctgttatctctattcagacctgtataagcagacgaactccaaggagactcggcgt
gtcttcctggagtttcatcagttcttcttggaccggtctgcacacctgaaagttccagtt
cctgaggaaatctccgtggatctagaaaagagaagacctgagcttattcctgaggacctg
catcgccactacattcagacaatgcaggagagagtccaccctgaagttcagaggcacttg
gaggacttccgacagaaacgcagcatggggctgaccttggctgagagtgagctgactaaa
cttgatgcagagagagacaaggaccggggaactctggagaaggagcgagcatgtgccgaa
cagatcgttaccaaaattgaagaagtgttgctgactgctcaggctgtagaagaagaaagg
agttccacaatgcagtatgtaattctcatgtatatgaagtatttgggagtaaaagtgaaa
gaacctcgaaacttggagcacaagcggggtcggatcggcttccttccaaagatcaagcaa
agcatgaagaaagatagagagggagaagaaaaagggaagcgaagaggattccccagcatt
ttgggacccccaagaagaccaagccgccacgacaacagtgcaattggcagggccatggag
atacagaagtcacgccacccgaagcacttatccactccctcgtctgtgagtcctgagcct
caggaccctgctaagttgcgccagagtggagtagccaatgaaggaacagacactggatac
ctgcctgccagttccatgtcctctgccacctcagggactgctctttcccaagagggaggg
agagagaatgatacgggaacaaagcaagtgggagaagcattggcgcctggagactgcttg
gacagcacacctcgagtccccaatactgttttcgacttccctcctcctctgttagatcaa
gtgcaggaggaggactgtgaagtagagagggtgacagaacatgggaccccaaaagccttt
cggaagtttgacagcatcgcctttggagaaagtcaaagtgaggatgagcagtttgaaaat
gacctggagacagatccacccaactggcagcagcttgttagcagagaagtgttactggga
ctgaaaccttctgagatcaaaagacaggaagtgattaatgaattgttctacactgagaga
gctcatgtccggacactgaaggttcttgaccaagtattctatcagcgagtgtccagagaa
gggattctatcaccttcagaactacgcaagattttttcaaacttggaagatatccttcaa
cttcatgttgggttgaatgaacaaatgaaagctgtccgaaaaaggaatgagacttctgtt
attgatcatattggggaagatctgctcatctggtttagtggaccaggagaggagaagctg
aaacacgctgccgccacattttgcagtaaccagccttttgccctggaaatgatcaagtct
cgccagaaaaaggattctcgattccatacttttgtgcaagatgctgagagtaatcccctg
tgccgtcgtcttcagctgaaggacatcattcccacccaaatgcagagactcactaagtac
ccgcttcttttggacaacattgccaagtacacagaatggcctccagaaagggaaaaggtg
aagaaggctgcagatcattgtcgtcaaatcttaaattatgtaaatcaggctgtcagggag
gcagaaaacaagcagcgcttagaagactatcagcgtcgccttgacacctccaatctcaag
ttgtccgagtaccccaatgttgacgagctcaggaatttggatttaacaaaaagaaagatg
attcacgaagggccgttggtctggaaggtgaatagagataaaagcatcgatctttataca
ctgctgctggaagacattcttgtgctgctacaaaagcaggatgacaggctggtgctaagg
tgccacagcaagattctggcatccacagccgacagcaaacacaccttcagccctgtcatt
aagctgagcacagtgctggttcggcaggtggcgacagataacaaagctttattcgtcatc
tccatgtcagataatggagcccaaatttatgaattggtagcacagacggtttctgaaaag
acagtctggcaagacctcatctgtcgaatggctgcgtcagtgaaggagcagtctacaaag
ccgattcccctcccccagccgccaccttgcgaaggagacaatgaagaagaagaaccagcc
aagttaaaagtggagcaccatgatctttcggtcactggtctgcaaagtccagacagagtt
ttgggattagaatctcccttaatttcgtcaaaacctcagtctcactcactgaatacccct
ggcaaatcagaggcagaacatctctttgtgaccgcagcacagtttgcaaaggaacagcat
acaaatgggacattcaaggaaggtgatggcgggtatccagtcacaatcccaggtccacac
ttgcctgtgtcagaggagcggtgggcattggacgcactgagaaatttgggcttgttgaag
cagttgctggtacagcagttaggtctcaccgagaagagcactcaggaagactggcagtcc
ttctcaagatacgggccagcttctgaagaggtacaggcagacagtggcatccgggacttg
gaaaatgttaaggcttgtcatgccagggaaggacagatgtcttttaaaactggaactggt
gatattgcaacttgtgacagtccacggacttcaactgagtcttgtgctgcacaggattca
gtgatactggcatcccaagacagccaggcaagtaacattttagtaatggaccacatgatc
ctgaccccagagatgcctactgcagagccagaagggggtctggatgagagtggagagcac
ttttttgatgcccgtgaagcacatagtgatgataatccatcagaaggtgatggagcagtt
aaaaaggaagagaaggatgttaatttacgcatctcaggaaactgtttgatccttgatggc
tatgatgcagttcaggagagctccacagatgaggaggttgcctcctcgttccccctgcag
cctgtgatgggcatccccgctgtggactccagccaccagcagcaacattcccctcagaat
gcgcatgccgaggggctggtttcaccattcaccccagaattcctggtccagcggcactgg
cgagctatggaggatacctgttttgagatccagagtccctcatgtacagattcacaaagc
caaatcctggagtacattcataaaatagaggctgacctggaacacttaaagaaggtggag
gaaagttacgctcttctttgccaaaggctggctggctcagccctccccgacaagctctca
gataaaagttag
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integrated database retrieval system
