Mus caroli (Ryukyu mouse): 110301266
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Entry
110301266 CDS
T05910
Symbol
Dscaml1
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcal04515
]
110301266 (Dscaml1)
Cell adhesion molecules [BR:
mcal04515
]
Immunoglobulin superfamily
DSCAM family
110301266 (Dscaml1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
Receptor_2B4
V-set_CD47
Interfer-bind
fn3_2
ChitinaseA_N
SseB
Motif
Other DBs
NCBI-GeneID:
110301266
NCBI-ProteinID:
XP_021027315
Ensembl:
MGP_CAROLIEiJ_G0032146
UniProt:
A0A6P5QBB8
LinkDB
All DBs
Position
9:42309672..42633917
Genome browser
AA seq
2111 aa
AA seq
DB search
MTGAGEPRREEPPPRAGLRSRESGAPSAGGWERAERGRGAAARPATGPPPRRIGPLYGMW
LVTFLLLLDSLHKARPEDVGTSLYFVNDSLQHVTFSSSVGVVVPCPAAGSPSAALRWYLA
TGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENAAGKIRSPNIRIKAV
FREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSITPENRFFITSHGGL
YISDVQKEDALSTYRCITQHKYSGETRQSNGARLSVTDPAESIPTILDGFHSQEVWTGHA
VELPCAASGYPIPAIRWLKDGRPLPADSRWAKRITGLTISDLRTEDSGTYICEVTNTFGS
AEANGILTVIDPLHVTLTPKKLKTGIGSTVILSCALTGSPEFTIRWYRNTELVLPGEAIS
IRGLSNETLLISSAQKSHSGAYQCFATRKAQTAQDFAIIVLEDGTPRIVSSFSEKVVNPG
EQFSLMCAAKGAPPPTVTWALDDEPVVRDGSHRTNQYTMSDGTTISHMNVTGPQIRDGGV
YRCTARNSVGSAEYQARINVRGPPSIRAMRNITAVAGRDTLINCRVIGYPYYSIKWYKDA
LLLPDNHRQVVFENGTLKLTDVQKGMDEGEYLCSVLIQPQLSISQSVHVAVKVPPLIQPF
EFPPASIGQLLYIPCVVSSGDMPIRITWRKDGQVIISGSGVTIESKEFMSSLQISSVSLK
HNGNYTCIASNAAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVM
WKHAKGSGNPQQYHPVPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKAMF
LTVKIPAMITSHPNTTIAIKGHAKELNCTARGERPIIIRWEKGDTVIDPDRVMRYAIATK
DNGDEVVSTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKARS
MNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIRM
YSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGY
QIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEIN
ATTLEDVPSQPPENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWGEM
QNVTTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDVPGPPAGIKAVPS
SASSVVVSWLPPTKPNGVIRKYTIFCSSPGSGQPAPSEYETSPEQLFYRIAHLNRGQQYL
LWVAAVTSAGRGNSSEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGDPVPAVK
WTKDSEDSAIPVSLDGHRLIHTNGTLLLRAVKAEDSGYYTCTATNTGGFDTIIVNLLVQV
PPDQPRLTVSKTSASSITLTWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSFKL
DSLKCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQG
WNNGGCPITAIVLEYRPKGTWAWQGVRANSSTEVFLTELREATWYELRMRACNSAGCGNE
TAQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIGCPVILATLGVALLFVVRKKRKEKRLK
RLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKATI
PVTDAEFSQAVNPQSFCTGVSLHHPALIQSTGPLIDMSDIRPGTNPVSRKNVKSAHSTRN
RYSSQWTLTKCQASTPARTLTSDWRTVGSQHGVTVTESDSYSASLSQDTDKGRNSMVSTE
SASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTNENADSMTSMSTPS
EPGICRFTASPPKPQDADRGKNVAVPIPHRANKSDYCNLPLYTKSEAFFRKADGREPCPV
VPPREASMRNLTRAYHTQARHLTLDPASKPLGLPHPGATAATATATLPQRTLAMPAPPAG
TAPPAPGPTPSEPSAAPSAAPPAPSTEPPRAGGPHTKMGGSRDSLLEMSTPGVGRSQKQG
AGAYSKSYTLV
NT seq
6336 nt
NT seq
+upstream
nt +downstream
nt
atgacaggagccggggagccgaggagggaggagccgccgccgcgcgctgggctgaggagc
agagagagcggggcgccgagtgcgggcggctgggagcgcgctgagcgggggagaggcgct
gccgcacggccggccacaggaccacctccccggagaatagggcctctttatggcatgtgg
ctggtaactttcctcctgctcctggactctttacacaaagcccgccccgaggatgtcggc
accagcctctactttgtaaatgactccctgcagcacgtgaccttctccagctctgtgggt
gtggtggtgccctgcccggcagctggatcccccagtgcggctctccgatggtacctggcc
acgggggacgacatctacgatgtgccgcacatccggcacgtgcatgccaatgggactctg
cagctctaccctttctccccctccgccttcaatagctttatccacgacaatgactatttc
tgcaccgcagagaacgcagccggcaagatccggagccctaacattcgcatcaaagcagtt
ttcagggaaccctacaccgtccgggtggaggatcaaaggtcaatgcgtggcaacgtggct
gtctttaagtgcctcatcccctcttcagtgcaggaatacgttagcgtcgtgtcttgggag
aaagacacggtctccatcactccagaaaacaggtttttcatcacatcacatggtggactg
tatatctcggacgtgcagaaggaagatgctctctccacctaccgctgcatcactcagcac
aaatacagtggggagactcgtcagagcaacggggctcggctctctgtgacagaccctgca
gagtctatccctaccatcctggatggcttccactcccaggaagtgtggactggccacgca
gtagagctgccctgtgctgcttccggctaccccatccctgccatccgctggctcaaagat
ggcagacccctccctgctgacagccgctgggctaagcgcattacagggctgaccataagt
gacctgcgcactgaggacagcggcacctacatctgtgaggtcaccaacacctttgggtca
gcagaggccaacggcatcctcacagtcatcgaccctcttcatgtgaccctgacaccaaag
aagctgaagacgggcatcgggagcacggtcatcctatcctgcgccctcacaggctcccca
gagttcaccatccgctggtaccgcaacacagaactggtgctgccgggtgaggccatctcc
atccgtgggctcagcaatgagactctgctcatctcctcggcacagaagagccattcggga
gcctaccagtgcttcgccacccgcaaggcccagacagcccaggactttgccatcattgtg
ctggaagacggcacgccccgcatcgtctcatccttcagcgagaaggtggtcaaccctggg
gagcagttctcactgatgtgtgccgccaagggcgccccgccccccactgtcacctgggcc
ctggacgacgagcctgtcgtgcgggacggaagccaccgcaccaaccagtacaccatgtcc
gacggcaccaccatcagccacatgaacgtcacgggtccccagatccgggatgggggcgtg
taccggtgcacagcgcggaactcggtgggcagtgctgaatatcaggcgcgaataaacgta
agaggaccccccagcatccgggcaatgaggaacatcacggcagtcgccgggcgggacaca
ctcatcaactgcagggtcattggctacccctactactccatcaagtggtacaaggatgct
ctgctgctaccagataaccaccgccaggtggtgtttgagaatgggactctcaagctgacg
gatgtgcagaagggcatggatgagggagaatacctgtgcagtgttctcatccagccacag
ctttccatcagccagagtgtccacgtggccgtcaaagtgccccctctgatccagcccttc
gagttcccccctgcctccatcggccagctgctctacatcccctgtgtggtgtcctcgggg
gacatgccgatccgcatcacctggaggaaggacggacaggtgatcatctcaggctcaggc
gtgaccatcgagagcaaggagttcatgagctccctgcagatctccagcgtctccctcaag
cacaacggcaactacacttgcatcgccagcaacgcagcggccactgtgagcagggagcgc
cagctcatcgtgcgtgtgccccctcgatttgtggtgcagcccaataaccaggatggcatc
tacggcaaagctggtgtactcaactgctcagtagatggctacccaccgcccaaggtgatg
tggaagcatgccaaagggagtgggaacccccagcaatatcacccggtgccccttactggc
cgcatccagatcctacccaacagctccctgctgatacgccacgtcctggaagaggacatc
ggctactacctctgccaggccagcaacggagtgggcaccgacatcagcaaggccatgttc
ctcaccgtgaaaatcccagcaatgatcacatctcaccccaacaccacgatcgccatcaag
ggccatgccaaggagctgaactgcactgcgcgtggcgagcggcccatcataatccgctgg
gagaagggggacacggtcattgatcccgatcgcgtcatgcgctatgccattgctaccaag
gacaatggcgatgaggtggtctctacgcttaagctcaagccagctgaccgtggggactct
gtgttcttcagctgccatgctatcaactcatatggagaggaccgaggtttgatccagctt
actgtgcaagaaccccctgaccccccagagctggagatccgggaggtgaaggcccggagc
atgaacctgcgctggactcagagatttgatggaaacagcatcatcaccggctttgatatt
gaatacaagaacaaatcagattcctgggattttaagcagtccacacgcaacatctcccca
actatcaaccaggcgaacatcgtggacttacaccctgcatcggtgtacagcatccgcatg
tactccttcaacaaaattgggcgcagcgagccgagcaaggagcttaccatcagtacggaa
gaggctgctcccgatgggcctcccatggatgtcaccttgcaaccagtgacttcacaaagc
atccaggtgacctggaaggcaccaaagaaggagctgcagaatggagtcatcaggggatac
cagattggctaccgggagaacagccccggcagtaatgggcagtacagcatcgtggaaatg
aaggcgacgggggacagtgaggtctacaccctggataacctcaagaagttcgctcagtac
ggcgtggtggtccaagccttcaaccgggcaggcacggggccctcatctagtgagatcaat
gccaccactttggaggatgtgcccagccagcctccagagaatgtccgagctctgtccatc
acttctgatgtggctgtcatctcctggtcggagcccccacgaagtaccctcaatggtgtc
ctcaaaggctaccgagtcatcttctggtcactctacgttgatggagagtggggcgagatg
cagaatgtcaccaccacaagggagcgagtggagcttcggggtatggagaagttcaccaac
tacagcgtccaggtgctcgcctacacgcaggctggggatggtgtgcgcagcagcgtgctc
tacatccagaccaaggaagatgttccaggcccccctgctggcatcaaagctgtcccttca
tcagctagcagtgtggtcgtgtcctggctgcccccaactaagcccaatggggtgatccgc
aaatacaccatcttctgttccagccctggctccggtcagccggctcccagcgagtatgag
accagtcctgaacagctcttctaccggatcgcccacctgaaccggggacagcagtacttg
ctatgggtggctgcggtcacctctgcaggcaggggcaacagcagcgagaaggtcaccatc
gagcctgctggcaaggccccggcaaagatcatctcatttggaggcactgtaacaacaccc
tggatgaaagatgtccggctgccttgcaattcagtgggagatccagtcccggctgtaaag
tggaccaaggacagtgaagactcagcaatccccgtgtccttggatggacaccggcttatc
cacacaaacggcacactgctgcttcgtgctgtgaaggctgaagactccggctattacacc
tgcacagccaccaacactggtggctttgataccatcatcgtcaaccttctggtacaagtt
cccccggaccagccccgcctcactgtctccaaaacctctgcctcttccatcaccctgacc
tggattccaggggacaatgggggcagctccatcagaggcttcgtgttgcaatactctgtg
gacaacagcgaggagtggaaggatgtgttcatcagctccagcgagcgctccttcaagcta
gacagcctcaagtgtggcacatggtacaaggtgaagctagcggccaagaacagtgtgggc
tctgggcgcatcagcgagatcatcgaggccaagacccatgggcgggagccttccttcagc
aaagaccaacacctcttcacccacatcaactccacacatgctcggcttaacctgcagggc
tggaacaatggaggttgtcccatcacagccattgtcctggagtaccggcccaaggggacc
tgggcctggcagggcgtccgagccaacagctccacagaggtgtttctgacagaacttcga
gaggctacgtggtatgagctacgcatgagggcttgcaacagcgccggctgtggcaatgag
actgcccagtttgccaccctggactacgatggcagcaccatcccacccatcaagtctgct
caaggagaaggcgatgatgtgaagaagctcttcaccatcggctgcccagtcatcctggcc
accctcggggtggcgctgctctttgttgtacgaaagaagaggaaggagaaaaggctgaag
aggctccgagatgcaaagagtttggcagaaatgttgataagcaagaacaaccgaagcttc
gacacccctgtgaaaggacctccccagggtccacggctccacatcgacatcccaagggtc
cagctgctcattgaggacaaggagggcatcaagcagctgggagatgacaaagccaccatc
ccagtaactgatgctgagttcagccaagctgtcaacccacagagcttctgtactggtgtc
tctttgcaccatccagccctcatccagagcacgggacccctcatcgacatgtctgacatc
cggccaggaaccaatccagtgtccaggaagaacgtgaaatcagcccacagcacccggaac
cggtactcaagccagtggaccttgaccaagtgccaggcctccacccctgcccgaaccctc
acttctgactggcgcactgtgggctcccagcatggtgtcaccgtcactgagagtgacagc
tacagcgctagtctatcccaagacacagacaaaggaaggaacagcatggtatccacagag
agcgcttcctccacctatgaggagctggcccgggcctacgagcacgccaagctggaggag
cagctgcagcacgccaagtttgaaatcacagaatgcttcatctcggacagctcctcggac
cagatgaccacgggcaccaacgagaacgccgacagtatgacatctatgagcacaccctca
gagcctggtatctgccgcttcacggcctctccacccaagccgcaggatgctgacaggggc
aagaacgtggctgtgcccatccctcatcgagccaacaagagtgactactgcaacctgcca
ctgtataccaagtctgaggccttcttccgaaaggcagatgggagggagccctgccctgtg
gtcccaccccgagaggcctccatgaggaacctgactcgagcctaccatacccaggcccgg
cacctcactctggaccctgccagcaagcccttgggcctcccccatccaggggccactgct
gccaccgccacggccaccttacctcagaggactctggccatgccagcccccccagctggc
acggcccccccagcacctggtcctactccaagtgagccctctgctgcccctagtgctgcc
cctccggcccccagcactgaacctccacgggccggaggcccacacaccaaaatggggggc
tccagggactcactactcgaaatgagcaccccaggggtagggcgttctcagaaacagggg
gctggcgcctattccaaatcttacaccctggtgtag
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