Mus caroli (Ryukyu mouse): 110301309
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Entry
110301309 CDS
T05910
Symbol
Man2c1
Name
(RefSeq) alpha-mannosidase 2C1 isoform X1
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
110301309 (Man2c1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110301309 (Man2c1)
Enzymes [BR:
mcal01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
110301309 (Man2c1)
Membrane trafficking [BR:
mcal04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
110301309 (Man2c1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Ams1-like_1st
Alpha-mann_mid
Glyco_hydro38C2
Motif
Other DBs
NCBI-GeneID:
110301309
NCBI-ProteinID:
XP_021027385
Ensembl:
MGP_CAROLIEiJ_G0032262
UniProt:
A0A6P5QBH6
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All DBs
Position
9:53827127..53838762
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AA seq
1065 aa
AA seq
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MPEPLVPSGATSRQHQGSSGEGRLIAMAAAPFLKHWRTTFERVEKFVSPIYFTDCNLRGR
LFGDSCSVTLSSFLTPERLPYEKAVQQNFSPAQVGDSFGPTWWTCWFRVELVIPEVWVGQ
EVHLCWESDGESLVWRDGEPVQGLTKEGEKTSYVLSERLRASDPRSLTLYVEVACNGLLG
AGKGSMIAAPDPEKMFQLSQAKLAVFHRDVHSLLVDLELLLGVAKGLGEDSQRSFQALHT
ANQIVNICDPAQPETYPAAKALASKFFGQHGGESQHTIHAMGHCHIDTAWLWPFKETVRK
CARSWSTAVALMEQNTDFIFACSQAQQLEWVKSQYPGLHARLQEFACRGQFVPVGGTWVE
MDGNLPSGEAMVRQFLQGQNFFLQEFGKMCSEFWLPDTFGYSAQLPQIMQGCGIQRFLTQ
KLSWNLVNSFPHHTFFWEGLDGSRVLVHFPPGDSYGMQGSVEEVLKTVTNNRDKGRTNHS
GFLFGFGDGGGGPTQTMLDRLKRLSNTDGLPRVQLSSPGQLFTALERDSGQLCTWVGELF
LELHNGTYTTHAQLKKGNRECEQILHDVEVLSSLALARSAQFLYPAAQLQHLWRLLLLNQ
FHDVVTGSCIQLVAEDAMNYYEDIRSHGNPLLSAAAAALCAGEPGPEGLLIINTLPWKRT
EVLALPKPCGAHSLALVTVPSIGYAPAPTPTSLQPLLPQQPVFVMQETDGSVTLDNGIIR
VRLDPTGCLTSLVLVASGREAIAEGALGNQFVLFDDVPLYWDAWDVMDYHLETRKPVPGQ
AGTLAVGTEGGLRGSAWFLLQISPSSRLSQEVVLDVGCPYVRFHTEVHWHEAHKFLKVEF
PARIRSPQATYEIQFGHLQRPTHNNTSWDWARYEVWAHRWIDLSECDFGLALLNNCKYGA
SVRGNVLSLSLLRAPKAPDATADMGRHEFTYALMPHKGSFQEAGVIHAAYNLNFPLLALP
APGPAPDTTWSAFSVSSPAVVLETIKQAERCHQHRTLVLRLYEAHGSHVDCWLHTSLPVQ
EATLCDLLEQRDPTGHLSLQDNRLKLTFSPFQVRSLLLVLQSPPN
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacctttggttccaagcggtgcaacgagccggcagcaccaaggatcttccggg
gagggaaggctcatcgccatggcggcagcgccattcttgaagcactggcgcaccactttc
gagcgggtggagaagttcgtgtccccgatctacttcaccgactgtaaccttcgcggcagg
ctcttcggggacagctgctcggtgacactctccagcttcctgacgcccgagaggcttccc
tatgagaaggcggtgcagcagaacttcagccctgcgcaggtcggcgacagcttcggaccc
acatggtggacctgctggtttcgggtagaactggtcatccctgaagtttgggtgggccag
gaagttcatctttgctgggaaagcgatggagaaagccttgtctggcgtgatggggaacct
gtccagggtttgaccaaagaaggtgaaaagaccagttatgtcctgagcgagaggctgcga
gcatcagaccctcggagcttgactctctatgtggaagtagcctgcaatgggcttctgggg
gccgggaagggaagcatgatcgcagcccctgacccggagaagatgttccagctgagccag
gctaaactggctgtgttccaccgggatgtccacagtctcctggtggacctggagctgttg
ctgggtgtagccaagggcctcggggaggacagccagcgcagcttccaggccctgcacaca
gccaaccagatagtgaacatatgtgaccctgctcagcctgagacttacccagcagccaaa
gccctggcctccaagttctttggccaacatggaggtgaaagccagcataccatccatgcc
atgggacactgtcacattgatacagcctggctttggcccttcaaggagactgtgaggaaa
tgtgcccggagctggtcgacagctgtggcgctcatggagcagaacacagacttcatcttt
gcctgctctcaggcacaacagcttgaatgggtcaagagccagtaccctggtctgcatgcc
cggctccaggagtttgcctgccgaggacagtttgtgcctgtggggggcacctgggtagaa
atggatgggaaccttcccagtggagaggccatggtgaggcagttcctgcagggccagaac
ttctttctgcaagagtttgggaagatgtgctctgagttctggctgccagatacatttggc
tactcagcacagctcccccagatcatgcaaggctgtggcatccagcgcttcctgacccag
aaactgagctggaacttggtcaactccttcccacaccatacctttttctgggaggggctg
gatggctcccgagtgctggtccacttcccacctggagactcatatggaatgcaaggcagt
gtggaggaggtgctcaagactgtgaccaacaaccgggacaaggggcggaccaaccacagt
ggcttcctcttcggcttcggggatgggggaggtggccccacacagaccatgttggaccga
ttaaagcggctgagcaacactgatgggctgcccagggtgcagctatcttctcctggccag
ctcttcacggcactggagagagactcgggacagctgtgcacatgggttggagaactcttc
ctggaactgcacaatggcacctacactacgcatgcccagctcaagaaggggaacagagaa
tgtgagcagattcttcatgacgtggaggtgctcagcagcctggccctagcccgaagtgcc
cagttcctatacccggcagcccagctgcagcacctctggaggctcctgctcctcaaccag
ttccatgatgtggtgactggaagctgcattcagctggtggcagaagatgccatgaactac
tatgaagacatccgttctcatggcaacccacttctcagtgctgcagccgcagccttgtgt
gccggggagccaggtcccgagggcctcctcattatcaacacactgccctggaagcgcact
gaagtgttggcactgcccaagccttgtggggctcacagcctagccctggtgacagtgcca
agtattggctacgctcctgctcccacccctacttcactgcagcccctcctcccccagcag
cctgtgtttgtgatgcaggagactgacggttctgtgactttggacaacggcatcatccgg
gtgagactggatccaactggctgtcttacttcactggtcctggtggcttctggcagggaa
gccattgctgagggagccctggggaaccagtttgtgttgtttgatgatgtgccattgtac
tgggatgcatgggatgtcatggactaccatctagaaacacggaagcctgtgcctggccag
gcagggaccctggcagtgggcactgaaggtggcctccggggcagtgcctggttcctgctc
cagatcagccccagcagtcggctcagccaggaggttgtgctagatgtcggctgcccctat
gtccgcttccacactgaggtgcactggcacgaggcccacaagttcctgaaggtggagttc
cctgctagaatacggagcccccaggctacctatgagatccagtttgggcacctccagagg
ccgacgcataacaacacctcttgggactgggctcgctatgaggtgtgggctcaccgctgg
atagatctgtcagagtgtgactttgggctggccctgctcaacaactgcaagtatggagca
tcagtacgaggcaacgtcctcagcctctcactgttgcgtgcacctaaggctccagatgct
actgctgacatggggcgccatgaattcacttacgctttgatgccacacaagggctccttc
caagaagctggtgtcatccatgctgcctacaacctcaactttcccctgctggcactgccg
gctccaggcccagcccctgacaccacctggagtgccttttctgtgtcttcaccagcagta
gtgttggagaccatcaagcaggctgagaggtgccatcagcaccgcacactggttctaagg
ctgtatgaggctcatggcagccatgtggactgctggctgcacacgtcgttgcctgttcag
gaggccaccctttgtgacctcctggagcagcgagaccccactggtcacctttccctccag
gacaaccgtctgaagctcaccttttctcccttccaagtgagatccctattgcttgtgctt
cagtctccaccaaactga
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