Mus caroli (Ryukyu mouse): 110301312
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Entry
110301312 CDS
T05910
Symbol
Cnot10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110301312 (Cnot10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110301312 (Cnot10)
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110301312 (Cnot10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
ARM_TT21_N
ARM_TT21
TPR_12
TPR_14
TPR_8
TPR_MalT
TPR_7
DUF6058
RdRP_head
Motif
Other DBs
NCBI-GeneID:
110301312
NCBI-ProteinID:
XP_021027389
Ensembl:
MGP_CAROLIEiJ_G0032773
UniProt:
A0A6P5QD71
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All DBs
Position
9:complement(110045942..110106388)
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AA seq
796 aa
AA seq
DB search
MKSFSLKSVKVCTSESSVGLCPPCSPGQGRRDVKLQEGRSYPLPIANGDTLWDYVQTLSD
QGAEKHEGAGQSSGVTDQEKELSASALQAFTSGNYDACLQHLACLQDINKDDYKIILNTA
VAEFFKNNQTTTDNLRQTLNQLKNQVHSAVEEMDGLDDVENSMLYYNQAVILYHLRQYTE
AISVGEKLYQFIEPFEEKFAQAVCFLLVDLYILTHQAEKALHLLAVLEKMISQGSGGKNG
KNETGNNSSKDGANPKAESAALIEAAKSKIHQYKVRGYIQMKSLKACKREIKSVMNTAGN
SAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGFMKTGECLRCMFWNNLGCIHFAMSK
HNLGIFYFKKALQENDNVCAQLSAGSTDPGKKFSGRPMCTLLTNKRYELLYNCGIQLLHV
GRPLAAFECLIEAVQVYHANPRLWLRLAECCIAANKGTSEQETKGLPTKKGIVQSIVGQG
YHRKIVLASQSIQNTVYNDGQSSAIPVASVEFAAICLRNALLLLPEEQQDPKQENGSKSS
SQLGGNTESSESSETCSSKSHDGDKFIPAPPSSPLRKQELENLKCSILACSAYVALALGD
NLMALNHADQLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVTDVSLGISS
NEQDQGSDKGENEAMESSGKRAPQCYPSSVNSARTVMLFNLGSAYCLRSEYDKARKCLHQ
AASMIHPKEVPPEAILLAVYLELQNGNTQLALQMIKRNQLLPVVKAHSDVRKKTVFQPVH
PIQPIQMPAFTTVQRK
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctttcagtttaaagagtgtcaaggtttgcacatccgagagctccgttggcctg
tgtcccccgtgttcaccaggccagggcaggagggacgtgaagcttcaggagggacggtcg
tacccgctccccattgccaatggagacacactgtgggattatgtgcagacactgtcggat
cagggagcagagaagcatgaaggggcaggccaatcatctggggtcacggaccaggagaag
gagctgtccgccagtgccctccaggccttcacatctggaaattatgatgcctgtctgcaa
caccttgcctgtctccaagatataaacaaagatgattacaaaattattctgaatacagca
gtagctgaattttttaaaaataatcaaacaacaacagataatttgagacaaacacttaac
cagctgaagaatcaggtccactcggctgttgaagagatggatgggttagacgatgttgag
aacagcatgctgtattataaccaggcagtcattctctatcatctgcgccagtacacagag
gccatatctgtgggcgagaagctctatcagttcatagaaccttttgaagaaaaatttgcc
caagcggtgtgctttttgctcgtagacttgtatatattaacccaccaagctgagaaagct
ctgcatcttcttgccgtcctagaaaaaatgatttcacagggtagcggtggcaaaaacggg
aagaacgagactggcaataacagcagcaaagacggagccaaccctaaggctgagagtgca
gctctaatagaggctgccaagtccaagatacaccagtacaaagtcagagggtacatccag
atgaagtccctgaaggcttgcaaaagggaaatcaagtctgtcatgaacacagctggaaat
tctgcaccttccctgtttcttaaaagcaactttgagtacttaaggggcaactatcgaaaa
gcggtgaagctgttaaatagttcaaacattgctgagcatccaggcttcatgaagacaggt
gaatgcttgagatgcatgttctggaataacctgggttgcatccactttgccatgagcaag
cacaatttggggattttctacttcaagaaggctctgcaggaaaacgacaacgtctgcgcc
cagctcagtgcgggtagcactgatccaggcaaaaagttttctggaagacccatgtgtaca
ttgctgaccaacaaaagatatgagctgctctacaactgtgggatccagctgctgcacgtc
gggaggcctcttgctgccttcgagtgtctgattgaagctgttcaggtgtaccacgcgaat
cctcgtctctggctacggctggctgagtgctgcattgctgccaataaagggacttctgag
caagaaactaaaggtcttcccaccaaaaaaggcattgtacagtctattgttggtcaggga
tatcaccgtaaaatagttctagcatcacagtcaattcagaacactgtctacaatgacggt
cagtcttcagccattcctgtagccagtgtggagtttgcagccatctgtctcagaaatgcc
ttgttgctgttacctgaagaacagcaagatcccaagcaggaaaatggctccaagagcagc
agccagcttggagggaacacggagagcagcgagagcagcgagacgtgcagcagtaaaagc
catgatggagataagttcattcctgctccaccgtcttctccgctgaggaaacaggagtta
gaaaacctcaagtgctccatccttgcttgcagtgcttatgtggctctggccttaggtgat
aacctcatggctttgaaccatgcagatcagctcctgcagcagcccaagctgtctggctct
cttaaatttttgggccatttatatgccgcagaagccctcatctccctcgacaggatatct
gatgccattacacacttgaacccagagaatgtcactgatgtctccttagggatctcttca
aatgagcaggaccaaggatcagacaagggtgaaaatgaagcaatggaatcctctggcaag
cgcgcccctcagtgctaccccagttctgtgaactctgcccggactgtgatgctcttcaac
ctgggcagtgcctactgcctgaggagcgagtacgacaaggcccgcaagtgtctgcatcag
gcggcatcgatgatccatcctaaggaggtgccccctgaggccatcctgctggccgtctac
cttgagctgcagaatggtaatacgcagctggccttgcagatgatcaagcggaaccagctg
ctccccgtagtaaaggcgcactctgatgtgaggaagaagacagtgttccagcccgtgcac
cccatccagcccatccaaatgccagcgttcaccaccgtgcagaggaagtga
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