Mus caroli (Ryukyu mouse): 110301315
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Entry
110301315 CDS
T05910
Symbol
Trpc1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04360
Axon guidance
mcal04724
Glutamatergic synapse
mcal04726
Serotonergic synapse
mcal04929
GnRH secretion
mcal04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
110301315 (Trpc1)
09154 Digestive system
04972 Pancreatic secretion
110301315 (Trpc1)
09156 Nervous system
04724 Glutamatergic synapse
110301315 (Trpc1)
04726 Serotonergic synapse
110301315 (Trpc1)
09158 Development and regeneration
04360 Axon guidance
110301315 (Trpc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcal04040
]
110301315 (Trpc1)
Ion channels [BR:
mcal04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
110301315 (Trpc1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
110301315
NCBI-ProteinID:
XP_021027398
Ensembl:
MGP_CAROLIEiJ_G0032532
UniProt:
A0A6P5QHN2
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Position
9:complement(91310756..91356888)
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AA seq
793 aa
AA seq
DB search
MMAALYPSTDLSGVSSSSLPSSPSSSSPNEVMALKDVREVKEENTLNEKLFLLACDKGDY
YMVKKILEENSSGDLNINCVDVLGRNAVTITIENESLDILQLLLDYGCQSADALLVAIDS
EVVGAVDILLNHRPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLK
QDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFEL
SADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSSDEPLDKRGL
LEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGIF
WPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPAL
ERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKF
HDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKF
LGMFLLVLFSFTIGLTQLYDKGYTSKEQKDCVGIFCEQQSNDTFHSFIGTCFALFWYIFS
LAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEW
KFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWICSHTSKGKVKRQNSLKEW
RNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEIRDLLG
FRTSKYAMFYPRN
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggccctgtacccgagcacagacctctcgggcgtctcctcctcctccctgcct
tcctccccatcctcctcatcgcccaacgaagtgatggcgctgaaggatgtgcgagaggtg
aaggaggagaacaccttgaatgagaagcttttcttgctggcgtgcgacaagggtgactat
tatatggttaaaaagattttggaggaaaacagttcaggtgacttgaacataaattgcgta
gatgtgcttgggagaaatgctgttaccataactattgaaaacgaaagcttggacatactg
cagctgcttttggactacggttgtcagtccgcagatgcacttttggtggcaatcgactct
gaagtagtgggagctgttgatatactacttaatcaccggccaaaacgatcatcaagacca
accattgtaaaacttatggaacgaattcagaatccagaatattcaacaacgatggatgtc
gcacctgttattttagctgctcatcgtaacaactatgaaatccttacaatgcttttaaag
caggatgtgtctttgcccaagccccatgctgttggctgtgaatgcacactgtgttctgca
aaaaacaagaaggacagcctcagacattccaggtttcgtcttgatatctatagatgtctg
gccagtccagctctgataatgttgacagaggaagatccaattctgagagcgtttgaactt
agtgctgacttaaaggaactcagccttgtggaggtggaattcaggaatgattatgaagag
ctagcccgtcagtgcaaaatgtttgctaaagatttgctcgcacaagcccggaattctcgt
gaactggaagttatcctaaaccatacatctagtgatgagcctcttgacaaacgaggacta
ctagaagaaagaatgaacttaagtcgtctgaaacttgctatcaaatataaccagaaggag
tttgtctcccagtcaaattgccagcagtttctgaacaccgtttggtttggacagatgtca
ggttaccgccgtaagcccacctgtaagaagataatgactgttttgacagttggcatcttc
tggccagttttgtcactatgctatttgatagcgcccaaatctcaatttggcagaatcatt
cacacacctttcatgaaattcattattcatggagcgtcgtatttcacattcttgctgtta
ctaaacctctactcacttgtctacaatgaggacaaaaaaaatacaatgggaccagccctg
gagagaatagattaccttctcatactgtggattattgggatgatttggtcagacattaag
agactgtggtatgaagggttggaagacttcctagaagaatcncgtaaccagctcagcttt
gttatgaattccctttacttggcaacctttgccctcaaagtggtggctcacaacaagttt
catgactttgctgaccggaaggactgggatgcattccaccccacgcttgtagcagaaggg
ctttttgcttttgcaaatgttctgagttaccttcgactcttttttatgtatacaaccagc
tctattttgggcccactgcagatttcaatgggacagatgttacaagattttgggaaattt
ctgggaatgttcctccttgttctgttttccttcacgattggactgactcagctctatgac
aaagggtacacttccaaagagcagaaggactgtgtgggcatcttctgtgaacagcaaagc
aatgacaccttccactcgttcattggcacctgctttgctctgttctggtacatcttctcc
ttagcgcacgtggccatctttgtcaccaggtttagctatggggaagagctgcagtccttc
gttggagctgtgattgttggaacttacaatgttgtggtcgtgattgtgctgacgaagctg
ctggtggcgatgcttcacaagagcttccagctgatcgcaaatcatgaggataaagaatgg
aagtttgctcgagcaaagctatggcttagctactttgatgacaaatgtacactgccccca
cctttcaacattattccttctccaaagacgatctgctatatgatcagtagcctcagtaag
tggatttgctcgcatacctcgaaaggcaaggtcaaacgtcaaaacagtttaaaggagtgg
agaaacttgaagcaaaagagagacgagaactaccagaaggtgatgtgctgcctagtgcac
cgctacctgacgtccatgcgacagaagatgcagagcacagaccaggccaccgtggagaac
ctcaatgaactgcgccaagatctgtcaaaattccgaaatgaaataagggatttgcttggc
tttcggacttctaaatatgctatgttttatccaagaaattaa
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