Mus caroli (Ryukyu mouse): 110301356
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Entry
110301356 CDS
T05910
Symbol
Ube4a
Name
(RefSeq) ubiquitin conjugation factor E4 A isoform X1
KO
K10596
ubiquitin conjugation factor E4 A [EC:
2.3.2.27
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110301356 (Ube4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110301356 (Ube4a)
Enzymes [BR:
mcal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110301356 (Ube4a)
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
U-box type E3
110301356 (Ube4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
110301356
NCBI-ProteinID:
XP_021027469
Ensembl:
MGP_CAROLIEiJ_G0032131
UniProt:
A0A6P5QDD4
LinkDB
All DBs
Position
9:complement(41797211..41836630)
Genome browser
AA seq
1092 aa
AA seq
DB search
MTDQENNNNISSNPFAALFGSLADAKQFAAIQKEQLKQQSGSVFGSEEGALCNSLHVPAD
ELPASPDDSDNSVSESLDEFDYSVSEISRSFRTHQEMCEQLNINHMIQRIFLITLDNSEL
QACTSDPSLKSGNGIPSRCVYLEEMAVELEDQDWLDMSNVEQAIFARLLLQDPGNHLISM
TSSTTLNLSADRDAGERHIFCYLYSCFQRAKEEITKVPENLLPFAVQCRNLTVSNTRTVL
LTPEIYVDQNIHEQLVDLMLEAIQGAHFEDVTEFLEEVIEALLLDEEVRTFPEVMIPVFD
ILLSRIKDLELCQILLYAYLDILVYFTRQKDMAKVFLEYIQPKDPSNGQMYQKTLLGVIL
NISCLLKTPGVVENHGFFLNPSRSSPQEIKVQEANIHQFMAQFHEKIYQMLKNLLQLSPE
TKHCILFWLGNCLHANAGRTKIWANQMPEIFFQMYASDAFFLNLGAALLKLCQPFCKPRS
SRLLTFNPTYCVLKDLNDEERKIKNVHMRGLDKETCLIPAVQEPMFPQSYNLVTENLALT
EYTLYLGFHRLHDQMVKINQNLHRLQVAWRDAQQSSSPAADNLREQFERLMTIYLSTKTA
MTEPQMLQNCLNLQVSMAVLLVQLAIGNEGSQPIELSFPLPDGYSSLAYVPEFFADNLGD
FLIFLRRFAEDILETSADSLEHVLHFITIFTGSIERMKNPHLRAKLAEVLEAVMPHLDQT
PSPLVSSVFHRKRVFCNFPYAPQLAEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRY
MWGTDCYRESIKDLADYASKNLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKIQQI
EKDRGEWESLTPEARREKEAGLQMFGQLARFHNIMSNETIGTLSFLTSEIKSLFVHPFLA
ERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNLGDEENFCATVPK
DGRSYSPTLFAQTVRVLKKINKPGNMIVAFSNLAERIKSLADLQQQEEETYADACDEFLD
PIMSTLMSDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRW
LAERKQQKEQPE
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgacagaccaggagaataacaacaacatctcaagtaacccctttgctgctctttttggc
tccctggctgatgccaagcagtttgcagcaatccagaaagagcagctgaagcagcagtcc
ggtagtgtatttggttctgaggaaggagcattgtgtaacagcttacatgttccagcagat
gagctcccagcaagcccagatgactcggataatagtgtgtcagagagcctggatgagttc
gactactccgtgtctgagattagccgctccttccggacacaccaagaaatgtgtgagcaa
ctcaacatcaatcacatgatccagaggatcttcctcatcaccctggacaacagtgagttg
caggcttgcaccagtgatccaagcttgaaaagcgggaatggcatccccagccgttgtgtg
tacttggaagaaatggcagtagagctggaagatcaagactggcttgatatgagcaatgtt
gagcaggccatctttgctcggttattgcttcaagatccaggaaaccacttgatcagcatg
acttcctccacaactttaaatctctctgctgatcgtgatgcaggagagaggcacatcttc
tgttacctttactcctgcttccagagagccaaggaagagattaccaaagttccagaaaac
ctgctcccctttgcagtgcagtgcagaaacctcactgtgtccaacactcgaacagttctc
ctcaccccagagatctatgttgaccaaaacatccatgagcaactggtagatttgatgttg
gaagctattcagggagcccattttgaagatgtaactgaatttttagaagaggtcattgaa
gccttgctgttggatgaggaggttcgaacatttcctgaagtcatgattccagtgtttgat
attttactcagccgaataaaagatctggaactctgccagatcctcctgtatgcatatctg
gacattcttgtctatttcactaggcagaaggatatggccaaggtgtttttagaatacatt
cagcccaaagatcccagcaatgggcagatgtatcagaagaccttgctgggagtcatcctg
aatatctcgtgcttgttaaagactccgggtgtggtagagaaccatggcttcttcctgaat
ccatcccgttccagtcctcaggagatcaaagtacaggaggccaacatccatcagttcatg
gctcagttccatgaaaagatctaccagatgctgaagaacttgctccagctctctccagaa
accaagcactgtatcttgttctggcttggaaactgtttgcatgcaaatgcaggccgcacc
aagatctgggccaatcagatgcccgaaatcttcttccaaatgtatgcctcggatgccttc
tttctgaatctgggtgctgccctcctgaagctgtgccagccattctgcaagcccagatcc
tcccggctcctcacctttaaccccacgtactgtgtcctcaaggacttgaatgatgaagaa
cgaaaaattaagaatgtgcatatgagaggtttggacaaggagacctgtctgatcccagct
gtgcaggagccaatgttcccccagagctacaaccttgtgacggagaacctggccctgaca
gagtataccttgtacttgggatttcacaggttgcatgatcagatggtaaaaatcaaccaa
aatctgcatcggctgcaggttgcctggcgggatgctcagcagagttctagccctgctgct
gacaatctccgagagcagttcgaacgcctgatgaccatctatctctctaccaagactgct
atgactgaaccccagatgctgcaaaactgcctgaatttgcaggtgtccatggctgttctg
ctggttcaactggccataggcaatgagggctcccagccaatagagctaagtttccctttg
ccagatggctacagctctttggcttatgtgccagaattttttgcagataacttgggtgat
ttcctcattttcctccgacgctttgctgaggacatcttggagacgtcagcagactccctg
gagcatgtccttcattttatcaccattttcactggaagcatagaaagaatgaagaatcct
cacctgagggccaaactagcagaggtgttagaagcagtgatgcctcacctagaccagacc
ccaagccccttggtgtccagtgtgttccaccggaaacgtgtgttctgcaactttccatac
gctccccaacttgcagaagctttgatcaaggtttttgtggacattgaatttacaggggac
ccccatcaatttgaacagaagtttaattaccgccgccctatgtatcccatcctaagatac
atgtgggggacagattgctatcgggagagcattaaggatttggctgactatgcctctaag
aatttagaagctatgaatcccccactgttcctccgatttcttaacctgttaatgaatgat
gctatcttccttttggatgaagctatacagtatttgagcaagataaagattcagcagatt
gagaaagaccgaggagaatgggagagtctgacaccagaagcccgccgagagaaagaggca
ggtctacagatgtttgggcagctggcacggttccataacatcatgtccaatgaaacaatt
ggtaccctttccttcctgacatcagagatcaagtcgctgttcgtgcatccgttcctggcc
gagcgcatcatctccatgctcaactacttcctgcagcacctggtgggccccaagatgggt
gccctcaaagtcaaggacttcagtgaatttgacttcaaacctcagcagctcgtatcagac
atctgcactatctacttaaatcttggggatgaggagaacttctgtgccactgtgcccaaa
gacggacgttcctattctccgactctctttgcacagacagtccgagtcctgaagaaaatc
aataagcctgggaatatgatcgtggctttcagtaacttggcagagagaatcaagtctctt
gcagacctccaacaacaagaggaggagacatatgcagatgcctgtgatgagttcctggat
cccatcatgagcacactgatgtctgaccctgtggtgcttccatcttccagagtcactgtg
gacagatccaccattgctaggcatttactcagtgaccaaacagatccttttaaccgtagt
ccccttaccatggaccagatccggcccaacacagaactgaaagaaaaaatccaacggtgg
ctcgcagaaaggaagcaacaaaaggagcagcctgaataa
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integrated database retrieval system
