Mus caroli (Ryukyu mouse): 110301618
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Entry
110301618 CDS
T05910
Symbol
Dnmt1
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1 isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal00270
Cysteine and methionine metabolism
mcal01100
Metabolic pathways
mcal05206
MicroRNAs in cancer
Module
mcal_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
110301618 (Dnmt1)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
110301618 (Dnmt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110301618 (Dnmt1)
03032 DNA replication proteins [BR:
mcal03032
]
110301618 (Dnmt1)
03036 Chromosome and associated proteins [BR:
mcal03036
]
110301618 (Dnmt1)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
mcal02048
]
110301618 (Dnmt1)
Enzymes [BR:
mcal01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
110301618 (Dnmt1)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
110301618 (Dnmt1)
DNA replication proteins [BR:
mcal03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
110301618 (Dnmt1)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
110301618 (Dnmt1)
Prokaryotic defense system [BR:
mcal02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
110301618 (Dnmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAH
DNA_methylase
DNMT1-RFD
zf-CXXC
DMAP_binding
Motif
Other DBs
NCBI-GeneID:
110301618
NCBI-ProteinID:
XP_021027815
Ensembl:
MGP_CAROLIEiJ_G0031852
UniProt:
A0A6P5Q5Y4
LinkDB
All DBs
Position
9:complement(16907029..16953225)
Genome browser
AA seq
1621 aa
AA seq
DB search
MPARTAPARVPALASPAGSLPDHVRRRASFLSKDLGLTVRQCVKEKLNLLHEFLQTEIKS
QLCDLETKLHKEELSEEGYLAKVKSLLNKDLSLENGTLSLTQKANGCPANGSRPTWRAEM
ADSNRSPRSRSTPRGPRRSKSDSDTLSVETSSSSVATRRTTRQTTITAHFTKGPTKRKPK
EEPEERNSAESVAEEKDQDKKRRVADTESGAGAAVEKLEEVTPGTQLGPEEPCEQEDDNK
SLRRHTRELSLRRKSKEDPDREARPETHLDEDEDEKKDKRSSRSRSQPRDPAAKRRPKEA
EPEQVAPETPEDRDEDEREEKRRKTTRKKLESLTVPVQSRSERKAAQSKSVIPKVNSPKC
PECGQHLDDPNLKYQQHPKDAVDEPQMLTSEILSIYDSTSTLFDTYEDSPMHRFTSFSVY
CSRGHLCPVDTGLIEKNVELYFSGCAKAIHDENPSMEGGINGKNLGPINQWWLSGFDGGE
KVLIGFSTAFAEYILMEPSEEYAPIFGLMQEKIYISKIVVEFLQNNPDAVYEDLINKIET
TVPPSTINVNRFTEDSLLRHAQFVVSQVESYDEAKDDDETPIFLSPCMRALIHLAGVSLG
QRRATRRVMGATKEKDKAPTKATTTKLVYQIFDTFFSEQIEKYDKEDKENAMKRRRCGVC
EVCQQPECGKCKACKDMVKFGGTGRSKQACLKRRCPNLAVKEADDDEEADDDVSEMPSPK
KLHQGKKKKQNKDRISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYL
ARVTALWEDKNGQMMFHAHWFCAGTDTVLGATSDPLELFLVGECENMQLSYIHSKVKVIY
KAPSENWAMEGGTDPETTLPGAEDGKTYFFQLWYNQEYARFESPPKTQPTEDNKHKFCLS
CIRLAELRQKEMPKVLEQIEEVDGRVYCSSITKNGVVYRLGDSVYLPPEAFTFNIKVASP
VKRPKKDPVNETLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKEIHCGKKKGKVNEADIKL
RLYKFYRPENTHKSYNGSYHTDINMLYWSDEEAVVNFSDVQGRCTVEYGEDLLESIQDYS
QGGPDRFYFLEAYNSKTKNFEDPPNHARSPGNKGKGKGKGKGKGKHQVSEPKEPEAAIKL
PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLK
LVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCD
YYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIIL
AAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPE
IQNGASNSEIPYNGEPQSWFQRQLRGSHYQPILRDHICKDMSPLVAARMRHIPLFPGSDW
RDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPESRQFSTLIP
WCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQ
GFPDSYRFFGNILDRHRQVGNAVPPPLAKAIGLEIKLCLLSSARESASAAVKAKEEAATK
D
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgcgaacagctccagcccgagtgcctgcgcttgcctccccggcaggctcgctc
cccgaccatgtccgcaggcgagcatctttcctaagcaaagacctggggctgactgtcagg
cagtgtgtgaaggagaaattaaacttactgcatgaattcctgcaaacagaaataaagagc
cagttgtgtgacttggaaaccaaattacataaagaggaattgtctgaggaaggctacctg
gctaaagtcaagtccctcttaaataaggatttgtccttggagaacggaacactctctctc
actcaaaaagccaacggttgtcccgccaacgggagccggccaacctggagagcagaaatg
gcagactcaaacagatccccaagatccaggtccacgcctcggggacccaggagaagcaag
tcggacagtgacaccctttcagttgaaacttcatctagttctgtggctacaaggagaacc
accaggcagaccaccatcacggctcacttcacaaagggccccactaagcggaaacccaag
gaagaacctgaggagagaaactcggccgagtctgttgcagaggaaaaagaccaggataag
aagcgcagagttgcagacacagagagtggtgctggagcggctgtggagaaactggaagag
gtaacaccgggaacccagctgggtccggaagagccgtgtgaacaggaagatgacaacaag
agtcttcgacgtcacaccagagagctatcattgaggcggaaatcaaaggaggatccagac
agagaagcaagaccggaaactcacttggacgaggacgaggatgaaaaaaaggataaaaga
agttccagatccaggagccagcccagagatccagctgccaaacggagacccaaggaagca
gagccagagcaggtagctccagagactcccgaggacagagacgaggatgaaagggaggag
aagagacgaaaaacgacacgtaaaaaactggagtcgctcaccgttcccgtacagagcaga
tcggagagaaaagccgctcaaagcaaaagtgtgatcccgaaggtcaactcgccaaagtgc
cccgagtgtggccagcacctagacgaccctaacctgaagtaccagcagcaccccaaggat
gctgtggatgaaccccagatgttgaccagtgagatactgtccatctacgactccacctcg
actttgtttgatacctatgaagattctcccatgcataggttcacttccttcagtgtgtac
tgcagtcgcgggcacctgtgtcctgtcgacaccggtctcattgagaagaacgtagagctc
tacttttctgggtgtgccaaagcaattcatgacgagaatccatctatggaaggtggtatt
aacggcaaaaacctcgggccaatcaatcagtggtggctcagtggctttgatggtggcgag
aaggtgctcattggcttctccactgcatttgctgaatacattttgatggagcccagcgaa
gagtatgcgccaatatttgggctgatgcaggagaaaatttacatcagcaagatcgttgtt
gagttcctgcaaaacaatcctgatgctgtatatgaagacctgatcaataagattgagacc
actgttcctccttctaccattaatgtgaaccggttcacagaggactccctcttacgccac
gcccagtttgtagtgagccaggtagagagttacgacgaagccaaggacgatgatgagaca
cccatcttcttgtctccctgtatgagagccctgatccatttggctggtgtctccctggga
cagaggcgagcaacaaggcgcgtcatgggtgctaccaaggagaaggacaaagcgcccacg
aaagccaccaccaccaagctggtctatcagatctttgacactttcttctcagagcagatt
gagaagtatgataaggaggacaaggagaatgccatgaagcgccgccgctgtggtgtctgt
gaggtctgtcagcagcctgagtgtgggaagtgcaaggcgtgcaaagatatggtgaagttt
ggtggcactggacggagtaagcaggcttgcctcaagaggaggtgtcctaacttggcggtg
aaggaggcagacgacgatgaagaggctgatgatgatgtgtcagagatgccatcacccaaa
aagctgcatcaggggaagaagaagaagcagaacaaggaccgcatctcctggcttgggcag
cctatgaagattgaagagaatagaacttactatcagaaggtgagcatcgatgaggagatg
ctagaggtgggcgactgcgtctcggtcattccagatgattcctccaaaccactctatcta
gccagggtcacagctctgtgggaagacaagaatgggcagatgatgttccacgcgcactgg
ttctgcgctgggacagacacagtcctgggagccacctccgaccccctggagctgttcctg
gtgggcgagtgcgaaaacatgcagctttcctacatccacagcaaggtcaaggtcatctac
aaagccccttctgaaaactgggccatggagggaggcacagaccctgagaccacactgcct
ggggctgaggacggcaagacttacttcttccagctctggtacaaccaggagtatgcaagg
tttgaatccccacccaagacccagccgaccgaggacaacaagcacaagttctgcctatct
tgtatccggctggctgagctgagacaaaaagaaatgcccaaggtcctggaacaaattgag
gaggtggatggccgggtctactgcagttccatcaccaagaatggtgttgtctaccgactg
ggtgacagtgtgtaccttcctcccgaggcctttactttcaacatcaaagtggctagcccc
gtgaaacgcccaaagaaggatcctgtgaacgagaccctgtaccctgagcactaccgcaag
tattcggactacatcaaggggagcaacctggatgctccagagccctatcgcatcggtcgg
ataaaagagatccactgtggcaagaagaaaggcaaggtcaacgaggcagacatcaagctg
aggctctacaagttctacaggcctgagaatacccacaagtcctacaacggatcctatcac
actgacatcaacatgctttactggagcgacgaggaagctgtggtgaacttcagcgacgtg
cagggccgctgtaccgtggagtacggagaagacctacttgagagcatccaggattattca
caagggggccccgaccgcttctacttcctcgaggcctacaattcaaagaccaaaaacttt
gaagacccaccaaaccacgcccgcagccctgggaacaaagggaaagggaaggggaaaggg
aaagggaaggggaagcatcaggtgtcagagcccaaagagcctgaggcagccatcaaactg
cccaagctccggaccctggatgtgttttccggctgtggagggttatcggaaggattccac
caagcaggcatctcggaaacgctgtgggccatcgagatgtgggacccggcagcccaggca
tttcggttgaacaaccccggcaccacagtgttcacagaggactgcaacgtgcttcttaag
ctggtcatggccggggaggtgaccaactccctgggccaaaggctgccacagaagggcgat
gtggagatgctgtgtggtgggccaccctgccagggcttcagtggcatgaaccgcttcaac
tcccgtacttactccaagttcaaaaactccctagtggtctccttcctcagctactgtgac
tactaccggcctcggttcttcctcctggagaacgtcaggaacttcgtgtcctacagacgc
tccatggtgctgaagctcacactgcgctgcctggtccgcatgggctaccagtgcaccttc
ggtgtgctccaggctggacagtatggtgtggcccagacacgaaggagggccatcatcctg
gctgcagccccaggagagaagctgcctctgttcccagagcctctgcatgtgtttgctccc
cgtgcctgccagctgagcgttgtggtggatgacaagaagtttgttagcaacatcacgagg
ctgagctcggggcccttccgaaccatcaccgtgcgagacaccatgtctgacctccctgag
atccagaacggagcctcgaattctgagatcccctacaatggagagccgcagtcctggttc
cagaggcagctgcgaggatcacactaccagcccatcctcagggaccatatctgcaaggac
atgagcccactggtggctgcccgcatgcggcacatcccactcttcccaggatcagattgg
cgtgacctgcccaacatacaggtgcggctgggagatggcgtcatagcccataagctacag
tacaccttccatgatgtgaaaaatggctacagcagcaccggtgccctacgtggagtctgt
tcctgtgcagaaggcaaggcctgcgaccctgagtccagacaattcagcaccctcatcccc
tggtgcctgccgcacactgggaaccggcacaaccactgggctggcctctatgggcgtctg
gagtgggatggcttcttcagcaccactgtcaccaaccctgagcccatgggcaagcagggt
cgggtgctccacccggagcagcaccgggtcgtgagtgttcgggaatgtgcccgctcccag
ggctttccagatagctaccggttcttcggcaacatcctggacagacaccggcaggtgggt
aatgctgtgccaccacccctggccaaagccattggcctggagattaagctctgcctgctg
tccagtgctcgggagagcgcatcagctgcagttaaagcaaaagaggaggctgctaccaag
gactag
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integrated database retrieval system
