Mus caroli (Ryukyu mouse): 110301657
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Entry
110301657 CDS
T05910
Symbol
Wdr82
Name
(RefSeq) WD repeat-containing protein 82
KO
K14962
COMPASS component SWD2
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110301657 (Wdr82)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110301657 (Wdr82)
03036 Chromosome and associated proteins [BR:
mcal03036
]
110301657 (Wdr82)
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110301657 (Wdr82)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
110301657 (Wdr82)
COMPASS/SET1 complex (yeast)
110301657 (Wdr82)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
NBCH_WD40
WD_LRWD1
Beta-prop_IFT140_1st
Beta-prop_EIPR1
VPS8_N
Beta-prop_NUP159_NUP214
MinC_C
Motif
Other DBs
NCBI-GeneID:
110301657
NCBI-ProteinID:
XP_021027881
Ensembl:
MGP_CAROLIEiJ_G0032612
UniProt:
A0A6P5QCL5
LinkDB
All DBs
Position
9:101560016..101580481
Genome browser
AA seq
313 aa
AA seq
DB search
MKLTDSVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD
KGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGSFIRLIDAFKGVVMHTFGGYANSKA
VTLEASFTPDSQFIMIGSEDGKIHVWNGESGIKVAVLDGKHTGPITCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaccgacagcgtgctccggagcttccgcgtcgccaaggtgttccgcgagaac
tcagacaagatcaactgctttgactttagtcccaatggcgagacggtcatctctagcagc
gatgatgactccatcgtgctctatgactgccaggagggcaaaccaaagagaaccctgtac
agtaagaagtacggtgtggacctcatcagatacacccatgcagccaacacagtcgtttac
agctctaacaaaatagacgatactattcgttacttgtccttgcatgacaataaatacatc
agatactttcctggacacagtaagagggtggtggccttgtccatgtcacctgtggatgac
actttcatttctgggtctcttgataagaccattcgactctgggatctccggtctcctaac
tgccagggcctcatgcatctacagggcaaacctgtctgttcctttgatccagaagggtta
atttttgctgcgggcgtcaactcagaaatggtcaagctttatgaccttcgttcttttgat
aagggaccatttgcaacatttaagatgcagtatgatcggacctgtgagtggacaggactt
aagttcagcaatgatggcaaattgatactcatctccaccaacggcagctttatccgtctt
attgacgcattcaagggtgtggtgatgcacacatttgggggttatgctaacagcaaagct
gtgacactcgaagcttcatttactccagactcacagtttattatgatcggttcggaagac
ggcaaaatccacgtctggaacggagagagtggtataaaagtggctgtattggatggcaaa
cacactggtcccattacctgtttgcaattcaaccccaagtttatgacctttgccagcgcc
tgttccaacatggccttctggttgcccaccattgatgactga
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integrated database retrieval system