Mus caroli (Ryukyu mouse): 110301794
Help
Entry
110301794 CDS
T05910
Symbol
Nectin1
Name
(RefSeq) nectin-1
KO
K06081
poliovirus receptor-related protein 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03266
Virion - Herpesvirus
mcal04514
Cell adhesion molecules
mcal04520
Adherens junction
mcal05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
110301794 (Nectin1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110301794 (Nectin1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
110301794 (Nectin1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110301794 (Nectin1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcal04515
]
110301794 (Nectin1)
04090 CD molecules [BR:
mcal04090
]
110301794 (Nectin1)
Cell adhesion molecules [BR:
mcal04515
]
Immunoglobulin superfamily
Nectin family
110301794 (Nectin1)
CD molecules [BR:
mcal04090
]
Proteins
110301794 (Nectin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_3
Ig_2
ig
I-set
Motif
Other DBs
NCBI-GeneID:
110301794
NCBI-ProteinID:
XP_021028110
Ensembl:
MGP_CAROLIEiJ_G0032093
UniProt:
A0A6P5QD47
LinkDB
All DBs
Position
9:40622286..40685375
Genome browser
AA seq
516 aa
AA seq
DB search
MARMGLAGAAGRWWGLALGLTAFFLPGTHTQVVQVNDSMYGFIGTDVVLHCSFANPLPSV
KITQVTWQKASNGSKQNMAIYNPTMGVSVLPPYEKRVEFLRPSFIDGTIRLSGLELEDEG
MYICEFATFPTGNRESQLNLTVMAKPTNWIEGTRAVLRARKGQDDKVLVATCTSANGKPP
SVVSWETRLKGEAEFQEIRNPNGTVTVISRYRLVPSREAHRQSLACIVNYHLDRFRESLT
LNVQYEPEVTIEGFDGNWYLQRTDVKLTCKADANPPATEYHWTTLNGSLPKGVEAQNRTL
FFRGPITYSLAGTYICEATNPIGTRSGQVEVNITEFPYTPTPEHGRRAGQMPTAIIGGVA
GSVLLVLIVVGGIIVALRRRRHTFKGDYSTKKHVYGNGYSKAGIPQHHPPMAQNLQYPDD
SDDEKKAGPLGGSSYEEEEEEEGGGGGGERKVGGPHPKYDEDAKRPYFTVDEAEARQDGY
GDRTLGYQYDPEQLDLAENMVSQNDGSFISKKEWYV
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggctcggatggggcttgcgggcgccgctggacgctggtggggactcgctctcggcttg
accgccttcttcctcccaggcactcacacgcaggtggtgcaggtgaacgactccatgtat
ggcttcatcggcacagatgtggtactgcactgtagctttgccaacccactgcccagtgtg
aagatcacccaggtcacatggcagaaggcctccaatggctccaagcagaacatggccatc
tacaacccgactatgggtgtgtctgtgctgcctccctacgagaaacgagtggagttcctg
cgaccctccttcatcgacggcaccatccgcctctccggtctggagctggaggacgagggc
atgtacatctgtgaatttgccaccttccctacgggcaaccgtgaaagccagctcaatctc
actgtgatggccaaacccaccaattggattgagggcacccgggcggtgcttcgagccagg
aagggacaggatgacaaggttttggtggccacctgcacctcagccaatgggaagcctccc
agtgtggtgtcctgggaaacacggctaaagggcgaggcagagttccaggaaattcggaac
cccaatggcaccgtgacagtcatcagccgttaccgcttggtgcccagcagggaagcccac
cggcagtccctggcctgcattgtcaactatcacctggaccgcttcagggagagccttacg
ctcaacgtgcagtatgaacctgaggtgaccattgagggctttgatggcaactggtacctg
cagcggacagatgtgaagctcacgtgcaaagcggatgctaacccgccagccactgagtac
cactggaccacgttgaatggctccctccccaagggtgtagaggcccagaacaggaccctc
ttcttccggggacctatcacctacagcttggcaggaacctacatctgtgaggccaccaac
cctattggcacccgatcaggccaggtggaggtcaatatcacagaattcccctacaccccg
actcctgaacacgggcggcgcgcagggcagatgcccacagccatcattgggggcgtggca
gggagtgtcctgctggtgctgattgtggtcggagggatcatagtggccctgcgcaggcgc
cggcacaccttcaagggtgactacagcaccaagaagcacgtgtatggcaacggctacagc
aaagcaggcatcccacagcatcacccacccatggcacagaacctgcagtacccagatgac
tcggatgatgaaaagaaggccggcccattgggcggaagcagctatgaggaggaagaggag
gaggagggtggtggaggaggaggcgaacgcaaggtgggcggcccccaccccaaatatgac
gaggatgccaaacggccctacttcactgtggatgaggctgaggcccgtcaggacggctat
ggggaccggactctgggctaccagtatgaccctgaacagctggacttggctgagaacatg
gtttctcagaacgacgggtctttcatttccaagaaagagtggtatgtgtag
DBGET
integrated database retrieval system