KEGG   Mus caroli (Ryukyu mouse): 110301794
Entry
110301794         CDS       T05910                                 
Symbol
Nectin1
Name
(RefSeq) nectin-1
  KO
K06081  poliovirus receptor-related protein 1
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal03266  Virion - Herpesvirus
mcal04514  Cell adhesion molecules
mcal04520  Adherens junction
mcal05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    110301794 (Nectin1)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    110301794 (Nectin1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    110301794 (Nectin1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    110301794 (Nectin1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:mcal04515]
    110301794 (Nectin1)
   04090 CD molecules [BR:mcal04090]
    110301794 (Nectin1)
Cell adhesion molecules [BR:mcal04515]
 Immunoglobulin superfamily
  Nectin family
   110301794 (Nectin1)
CD molecules [BR:mcal04090]
 Proteins
  110301794 (Nectin1)
SSDB
Motif
Pfam: C2-set_2 V-set Ig_3 Ig_2 ig I-set
Other DBs
NCBI-GeneID: 110301794
NCBI-ProteinID: XP_021028110
Ensembl: MGP_CAROLIEiJ_G0032093
UniProt: A0A6P5QD47
LinkDB
Position
9:40622286..40685375
AA seq 516 aa
MARMGLAGAAGRWWGLALGLTAFFLPGTHTQVVQVNDSMYGFIGTDVVLHCSFANPLPSV
KITQVTWQKASNGSKQNMAIYNPTMGVSVLPPYEKRVEFLRPSFIDGTIRLSGLELEDEG
MYICEFATFPTGNRESQLNLTVMAKPTNWIEGTRAVLRARKGQDDKVLVATCTSANGKPP
SVVSWETRLKGEAEFQEIRNPNGTVTVISRYRLVPSREAHRQSLACIVNYHLDRFRESLT
LNVQYEPEVTIEGFDGNWYLQRTDVKLTCKADANPPATEYHWTTLNGSLPKGVEAQNRTL
FFRGPITYSLAGTYICEATNPIGTRSGQVEVNITEFPYTPTPEHGRRAGQMPTAIIGGVA
GSVLLVLIVVGGIIVALRRRRHTFKGDYSTKKHVYGNGYSKAGIPQHHPPMAQNLQYPDD
SDDEKKAGPLGGSSYEEEEEEEGGGGGGERKVGGPHPKYDEDAKRPYFTVDEAEARQDGY
GDRTLGYQYDPEQLDLAENMVSQNDGSFISKKEWYV
NT seq 1551 nt   +upstreamnt  +downstreamnt
atggctcggatggggcttgcgggcgccgctggacgctggtggggactcgctctcggcttg
accgccttcttcctcccaggcactcacacgcaggtggtgcaggtgaacgactccatgtat
ggcttcatcggcacagatgtggtactgcactgtagctttgccaacccactgcccagtgtg
aagatcacccaggtcacatggcagaaggcctccaatggctccaagcagaacatggccatc
tacaacccgactatgggtgtgtctgtgctgcctccctacgagaaacgagtggagttcctg
cgaccctccttcatcgacggcaccatccgcctctccggtctggagctggaggacgagggc
atgtacatctgtgaatttgccaccttccctacgggcaaccgtgaaagccagctcaatctc
actgtgatggccaaacccaccaattggattgagggcacccgggcggtgcttcgagccagg
aagggacaggatgacaaggttttggtggccacctgcacctcagccaatgggaagcctccc
agtgtggtgtcctgggaaacacggctaaagggcgaggcagagttccaggaaattcggaac
cccaatggcaccgtgacagtcatcagccgttaccgcttggtgcccagcagggaagcccac
cggcagtccctggcctgcattgtcaactatcacctggaccgcttcagggagagccttacg
ctcaacgtgcagtatgaacctgaggtgaccattgagggctttgatggcaactggtacctg
cagcggacagatgtgaagctcacgtgcaaagcggatgctaacccgccagccactgagtac
cactggaccacgttgaatggctccctccccaagggtgtagaggcccagaacaggaccctc
ttcttccggggacctatcacctacagcttggcaggaacctacatctgtgaggccaccaac
cctattggcacccgatcaggccaggtggaggtcaatatcacagaattcccctacaccccg
actcctgaacacgggcggcgcgcagggcagatgcccacagccatcattgggggcgtggca
gggagtgtcctgctggtgctgattgtggtcggagggatcatagtggccctgcgcaggcgc
cggcacaccttcaagggtgactacagcaccaagaagcacgtgtatggcaacggctacagc
aaagcaggcatcccacagcatcacccacccatggcacagaacctgcagtacccagatgac
tcggatgatgaaaagaaggccggcccattgggcggaagcagctatgaggaggaagaggag
gaggagggtggtggaggaggaggcgaacgcaaggtgggcggcccccaccccaaatatgac
gaggatgccaaacggccctacttcactgtggatgaggctgaggcccgtcaggacggctat
ggggaccggactctgggctaccagtatgaccctgaacagctggacttggctgagaacatg
gtttctcagaacgacgggtctttcatttccaagaaagagtggtatgtgtag

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