Mus caroli (Ryukyu mouse): 110302214
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Entry
110302214 CDS
T05910
Symbol
Dcaf1
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
110302214 (Dcaf1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mcal01001
]
110302214 (Dcaf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110302214 (Dcaf1)
Enzymes [BR:
mcal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
110302214 (Dcaf1)
Protein kinases [BR:
mcal01001
]
Serine/threonine kinases: Other
Other
110302214 (Dcaf1)
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110302214 (Dcaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
110302214
NCBI-ProteinID:
XP_021028689
Ensembl:
MGP_CAROLIEiJ_G0032635
UniProt:
A0A6P5QG43
LinkDB
All DBs
Position
9:102191895..102258167
Genome browser
AA seq
1516 aa
AA seq
DB search
MKNSCPYGQVMTTVVVHVDSKAELTTLLEQWEKDHGSGQDMVPILTRMSELIEKETEEYR
KGDPDPFDDRHPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLL
DIMPGLETAVVFQEKEGIVENLFKWAREADQPLRTYSTGLLGGAMENQDIAANYRDENSQ
LVAIVLRRLRELQLQEVALRQDSKRPSPRKLSSEPLLPLDEEAVDMDYGDMAVDVVDGEQ
EASRDMEISFRLDSSHKTSSRVNSATKPEEGGLKKNKSAKHGDRENFRKAKQKLGFSSSD
PDRVFVELSNSSWSEMSPWVIGTNYTLYPMTPAIEQRLILQYLTPLGEYQELLPIFMQLG
SRELMMFYIDLKQTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAAT
GVSMCLYYLSYNQDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFR
AVLELFDRYDGLRRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRKYFEAH
LAIKLEQVKQSLQRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVF
LKLSCVQLLLQLISIACNWKTYYARNDTVRFALDVLAILTVVPKIQLQLAESVDVLDEAG
SAVSTVGISIILGVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKL
SQTPKSSEHTLAKMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTV
RQIISKLPLFSSCQIQQLMKEPVLQDKRSDHVKFCKYAAELIERVSGKPLLIGTDVSLAR
LQKADVVAQSRISFPEKELLLLIRNHLISKGLGETATVLTREADLPMTAASHSSAFTPVT
AAASPVSLPRTPRIANGIASRLGSHAAVGASAPSAPPAHPPPRPAQGSLVLPGPSHAGNS
PLIGRISFIRERPSPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEY
LREQHARCKNPVATCPPFSLFTPHQCPEPKQRRQAPINFTSRLNRRASFPKYGGVDGGCF
DRHLIFSRFRPISVFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASY
NCHNSAITHLEPSRDGSLLLTSATWSQPLSALWGMKSVFDMKHSFTEDHYVEFSKHSQDR
VIGTKGDIAHIYDIQTGNKLLTLFNPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSAQA
IHKFDKFNMNISGVFHPNGLEVIINTEIWDLRTFHLLHTVPALDQCRVVFNHTGTVMYGA
MLQADDEDDLLEERMKSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIEN
QGSMDALNMDTVCRLYEVGRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQ
LLEAELEEDDNNENAGEDGDNDFSPSDEELANLLEEGEEGEDEDSDADEEVELILGDTDS
SDNSDLEDDIILSLNE
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatagctgtccatacggccaagtcatgactacagtagtggtacatgtggactcc
aaagctgagctcactaccctgctggagcagtgggaaaaggaccatggcagtggccaggat
atggtaccaatccttaccagaatgtctgagttaattgaaaaagaaactgaagaatatcgt
aaaggagatccagatccatttgatgatcgacatcctggtcgagctgatccagagtgtatg
ctgggccatttgctgagaatactcttcaagaacgatgatttcatgaatgcactggtaaat
gcatatgtgatgacaagtagagagccccctttaaatactgcagcttgcagactgctgctg
gacatcatgccgggcctagaaactgcagttgtctttcaagaaaaggaaggaattgttgaa
aatcttttcaaatgggcccgagaggctgatcagccacttaggacatattctactggactg
ctgggaggtgctatggaaaatcaagatattgctgccaactacagagatgaaaattcacag
ttggtggcaatagtgcttagaagactgagggagctccagcttcaagaagtggctttgcgg
caggacagtaagcgtcctagtccacggaagctctcttcggaaccccttttgcctctggat
gaggaagctgtggatatggactatggtgacatggcagtggatgttgtggatggagaacaa
gaagcttctagagatatggagatctcctttcgtcttgattcaagtcacaagaccagtagt
agagtgaactcagcaactaaacctgaggaaggaggattaaagaaaaacaagtcagcaaag
catggtgacagagagaactttaggaaggccaagcagaagttgggcttctcatcttctgac
ccagatcgtgtgtttgttgagctgtctaatagcagctggtcagaaatgtccccctgggtg
attggcaccaattacactctctatcctatgactcctgctattgagcagagacttattctt
cagtatttgacccctttaggagagtatcaggagttacttcccatattcatgcaacttgga
tcaagagaattgatgatgttttatattgatctgaaacagactaatgatgtcctgcttact
tttgaggcactcaagcacctagcatctctcctgcttcataacaaatttgccacagaattt
gttgcacatggtggagtacagaaattactggaaattcctcgtccttctatggctgcaact
ggtgtgtccatgtgcttgtattacctgtcctacaaccaggatgctatggaaagagtttgc
atgcatcctcacaatgttctatctgatgtggtgaactataccctgtggttaatggaatgt
tctcatgcctcaggatgttgccatgctactatgtttttctcaatttgtttctcattccgg
gctgttttggagctcttcgaccgttatgatggtcttcgtcgtctggtgaacttgatcagt
actttggagattttaaatttggaagaccagggtgcacttttgagtgatgatgaaatattt
gctagtcgccaaacaggaaaacatacctgcatggctctgcgcaagtattttgaggctcac
ctggccattaaattggaacaagtcaagcagtcacttcagaggacggagggtggtattctt
gttcacccccagcctccatacaaggcatgctcatatactcatgagcagattgtggaaatg
atggaatttttgatagagtatggcccagctcagctatattgggaacctgctgaagtcttc
ctcaagctttcctgtgtacagcttttactacagcttatttccatcgcctgcaattggaag
acctattatgcaaggaatgatactgtgcgttttgctttggatgtccttgctattctcact
gtggtgccaaaaatccagctccagttggcggagtcagtggatgtactggacgaggctggc
tctgctgtctccactgtaggtatcagcattattttgggcgtggctgagggtgagttcttt
atccatgatgctgaaattcagaagtcagcacttcaaattatcatcaattgtgtatgtggt
ccagataaccgaatatccagtattggcaaatttatttctggaactcctcggagaaagcta
tctcagactcccaagagtagtgagcacactctggccaagatgtggaatgtggtccagtcc
aacaatggcatcaaggtgcttctgtccctgttgtccatcaagatgcccattacagatgca
gaccagatccgggccctggcctgcaaagcccttgtaggcctgtctcgaagtagcactgtt
cgacagatcatcagtaagcttcccctttttagtagctgccagattcaacagctgatgaaa
gagcctgtgctgcaggataagcgtagtgaccacgtcaagttctgcaaatacgctgctgag
ctcattgagcgtgtatcaggaaagcctcttctcattggcactgatgtgtctctcgcacga
ctgcagaaagcagatgttgttgctcagtcgaggatctccttccctgagaaagagcttctc
ctgttgatacggaaccatctcatttctaaagggctcggagagacagcaactgtgctgacg
agagaggctgacctgcccatgactgctgcctcacattcttctgccttcaccccagtgact
gctgctgcttctcctgtctctcttccccggacccctcggattgccaacggcattgcaagt
cgactgggcagccatgctgctgtgggtgcttctgccccttctgctccccctgcccatcct
ccaccacgccccgcccagggttcattggttttgcctggcccatcacatgcaggcaattcc
cctttgattggtaggatcagttttatcagagagaggccatcaccgtgcaatggcaggaaa
attcgagtgttgcggcagaagtcggaccatggtgcatacagccagagccctgccataaaa
aaacaattggatagacatcttccttccccacctacgctggacagtatcatcacagagtat
cttagagagcaacatgctcgatgcaagaaccccgttgccacctgtcctcctttttctctc
tttactcctcatcagtgtcctgaaccaaaacagaggcggcaagcgccaataaactttacc
tcaaggctaaaccgcagggcatcatttccaaaatatggaggggtagatggcggatgcttt
gataggcaccttatctttagcagatttcgtccgatttcagtgttccgggaagctaatgaa
gatgaaagtggcttcacctgttgtgcattctcagcccgggagcggttcctgatgcttggc
acttgtacagggcagctgaagctctacaatgtgtttagtggacaggaagaggccagctat
aactgtcacaactcagccatcacacaccttgaaccgtccagggatgggtccttacttctg
acatctgccacttggagccagcctttgtctgcactttggggaatgaaatcagtatttgat
atgaagcattccttcacagaagatcactatgtggagttcagtaagcactctcaggatcgg
gtcataggcacaaaaggagacattgcccatatttatgatattcagactggcaacaagctg
ttgactctgtttaacccagatcttgccaacaactacaagaggaactgtgccacctttaat
cctacagatgatcttgtcttaaatgatggcgtcctctgggatgtccgctctgcacaggcc
atccacaagtttgacaagttcaacatgaatatcagtggtgttttccatccaaatgggctg
gaagtcatcatcaatacagagatttgggaccttcggactttccatcttttacacactgtt
cctgctctggatcaatgccgtgtggtgtttaaccacactgggacagtgatgtatggagca
atgttgcaggcagatgatgaagatgacttactggaagagaggatgaaaagcccttttggg
tcatcctttcgaacattcaacgcaactgattataaacctatagcaactattgatgtgaaa
cgaaacatctttgacctgtgcacagacaccaaagactgttatcttgctgtcattgagaat
caaggcagcatggatgcactgaatatggacacagtatgcaggctttatgaagtgggtagg
cagcgtctggcagaggatgaggatgaagaggaggaccaggaagaggaagaacaggaggaa
gaagatgatgatgaagatgatgatgatactgatgatttagatgaactagacactgaccag
ttgctggaggcagaactggaggaggatgacaacaatgagaatgcaggagaggatggagac
aatgacttctctccctctgatgaggagttagcaaaccttctagaggagggagaggagggg
gaagatgaagactctgatgcagatgaggaggtggagctgatcctgggggacacagacagc
tcggacaactctgatttggaagatgacatcatcttatctctgaatgagtga
DBGET
integrated database retrieval system
